FFCP PHASE1:Hg19::chr17:50822847..50822851,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:50822847..50822851,- | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_at_chr17:50822847..50822851,- | |description=CAGE_peak_at_chr17:50822847..50822851,- | ||
|id=chr17:50822847..50822851,- | |id=chr17:50822847..50822851,- | ||
|ontology_enrichment_celltype=CL:0002178!6.10e-08!3;CL:0000039!7.71e-07!7;CL:0000586!7.71e-07!7 | |ontology_enrichment_celltype=CL:0002178!6.10e-08!3;CL:0000039!7.71e-07!7;CL:0000586!7.71e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.10e-23;3!CL:0000039;2.24e-10;7!CL:0000586;2.24e-10;7!CL:0002253;7.97e-10;2!CL:0000047;1.44e-09;2!CL:0002251;3.24e-08;20!CL:0000322;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.10e-23,3;CL:0000039,2.14e-10,7;CL:0000586,2.14e-10,7;CL:0002253,7.98e-10,2;CL:0002251,3.24e-08,20;CL:0000322,9.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.57e-13!235;DOID:14566!1.18e-12!239;DOID:0050687!1.89e-11!143;DOID:305!1.89e-09!106 | |ontology_enrichment_disease=DOID:162!4.57e-13!235;DOID:14566!1.18e-12!239;DOID:0050687!1.89e-11!143;DOID:305!1.89e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.72e-11;14!DOID:3493;9.06e-10;2!DOID:3910;1.44e-09;2!DOID:3095;2.41e-07;22!DOID:2994;2.41e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.72e-11,14;DOID:3493,9.46e-10,2;DOID:3910,1.57e-09,2;DOID:3095,2.31e-07,22;DOID:2994,2.31e-07,22;DOID:0050687,7.40e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.09e-09!8;UBERON:0002046!2.82e-09!5;UBERON:0004117!2.82e-09!5;UBERON:0007689!2.82e-09!5;UBERON:0007123!2.82e-09!5;UBERON:0003091!2.82e-09!5;UBERON:0003135!4.57e-07!11 | |ontology_enrichment_uberon=UBERON:0000473!1.09e-09!8;UBERON:0002046!2.82e-09!5;UBERON:0004117!2.82e-09!5;UBERON:0007689!2.82e-09!5;UBERON:0007123!2.82e-09!5;UBERON:0003091!2.82e-09!5;UBERON:0003135!4.57e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.84e-14;5!UBERON:0010039;1.84e-14;5!UBERON:0004903;1.44e-09;2!UBERON:0002173;1.44e-09;2!UBERON:0002186;1.44e-09;2!UBERON:0005409;3.27e-07;22!UBERON:0004821;8.62e-07;3!UBERON:0007499;8.62e-07;3!UBERON:0003215;8.62e-07;3!UBERON:0010368;8.62e-07;3!UBERON:0009911;8.62e-07;3!UBERON:0002299;8.62e-07;3!UBERON:0006524;8.62e-07;3!UBERON:0008874;8.62e-07;3!UBERON:0002169;8.62e-07;3!UBERON:0004894;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.57e-09,2;UBERON:0002173,1.57e-09,2;UBERON:0002186,1.57e-09,2;UBERON:0000945,2.16e-09,8;UBERON:0010039,2.16e-09,8;UBERON:0004821,9.12e-07,3;UBERON:0003215,9.12e-07,3;UBERON:0010368,9.12e-07,3;UBERON:0009911,9.12e-07,3;UBERON:0002299,9.12e-07,3;UBERON:0006524,9.12e-07,3;UBERON:0008874,9.12e-07,3;UBERON:0002169,9.12e-07,3;UBERON:0004894,9.12e-07,3 | |||
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|short_description=p@chr17:50822847..50822851,- | |short_description=p@chr17:50822847..50822851,- | ||
}} | }} |
Latest revision as of 18:57, 25 July 2015
Short description: | p@chr17:50822847..50822851, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:50822847..50822851, - |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.10e-23 | 3 |
germ line cell | 2.14e-10 | 7 |
germ cell | 2.14e-10 | 7 |
epithelial cell of large intestine | 7.98e-10 | 2 |
epithelial cell of alimentary canal | 3.24e-08 | 20 |
pneumocyte | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.57e-09 | 2 |
alveolar duct | 1.57e-09 | 2 |
bronchiole | 1.57e-09 | 2 |
stomach | 2.16e-09 | 8 |
food storage organ | 2.16e-09 | 8 |
pulmonary alveolus epithelium | 9.12e-07 | 3 |
alveolus | 9.12e-07 | 3 |
pulmonary lobule | 9.12e-07 | 3 |
lobule | 9.12e-07 | 3 |
alveolus of lung | 9.12e-07 | 3 |
alveolar system | 9.12e-07 | 3 |
pulmonary acinus | 9.12e-07 | 3 |
alveolar sac | 9.12e-07 | 3 |
alveolar wall | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.72e-11 | 14 |
signet ring cell adenocarcinoma | 9.46e-10 | 2 |
lung adenocarcinoma | 1.57e-09 | 2 |
germ cell and embryonal cancer | 2.31e-07 | 22 |
germ cell cancer | 2.31e-07 | 22 |
cell type cancer | 7.40e-07 | 143 |