FFCP PHASE1:Hg19::chr1:94996081..94996103,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94996081..94996103,- | |||
|coexpression_cluster_id=C935 | |||
|description=CAGE_peak_at_chr1:94996081..94996103,- | |description=CAGE_peak_at_chr1:94996081..94996103,- | ||
|id=chr1:94996081..94996103,- | |id=chr1:94996081..94996103,- | ||
|ontology_enrichment_celltype=CL:0002076!7.16e-17!43;CL:0000223!8.57e-11!59;CL:0000066!1.64e-10!254;CL:0002368!1.42e-08!13;CL:0002251!3.60e-07!21 | |ontology_enrichment_celltype=CL:0002076!7.16e-17!43;CL:0000223!8.57e-11!59;CL:0000066!1.64e-10!254;CL:0002368!1.42e-08!13;CL:0002251!3.60e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;7.77e-17;42!CL:0002368;4.91e-16;13!CL:0000244;1.90e-10;4!CL:0000731;1.90e-10;4!CL:0002166;9.90e-09;3!CL:0002251;1.51e-08;20!CL:0002621;1.74e-08;3!CL:0002202;2.27e-08;9!CL:0002632;2.27e-08;9!CL:0002159;1.12e-07;14!CL:0002328;3.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.46e-22,42;CL:0002368,2.12e-16,13;CL:0000066,9.55e-16,253;CL:0000223,4.05e-14,58;CL:0000244,1.56e-10,4;CL:0000731,1.56e-10,4;CL:0002166,1.04e-08,3;CL:0002202,1.05e-08,9;CL:0002632,1.05e-08,9;CL:0002621,1.43e-08,3;CL:0002251,1.69e-08,20;CL:0002328,1.04e-07,3;CL:0002159,1.36e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;5.18e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.23e-13!511;UBERON:0000467!3.44e-09!625;UBERON:0000480!4.58e-09!626;UBERON:0000468!5.21e-09!659;UBERON:0005911!4.81e-08!82;UBERON:0004119!1.35e-07!169;UBERON:0000925!1.35e-07!169;UBERON:0006595!1.35e-07!169;UBERON:0000475!1.89e-07!365 | |ontology_enrichment_uberon=UBERON:0000062!1.23e-13!511;UBERON:0000467!3.44e-09!625;UBERON:0000480!4.58e-09!626;UBERON:0000468!5.21e-09!659;UBERON:0005911!4.81e-08!82;UBERON:0004119!1.35e-07!169;UBERON:0000925!1.35e-07!169;UBERON:0006595!1.35e-07!169;UBERON:0000475!1.89e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0005911;1.30e-09;36!UBERON:0000486;1.69e-09;12!UBERON:0004807;1.61e-08;22!UBERON:0001949;1.74e-08;3!UBERON:0000365;2.49e-08;5!UBERON:0004815;3.00e-07;3!UBERON:0002031;3.00e-07;3!UBERON:0005910;6.45e-07;6!UBERON:0000344;7.77e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.13e-10,160;UBERON:0000925,2.13e-10,160;UBERON:0006595,2.13e-10,160;UBERON:0005911,8.25e-10,82;UBERON:0001949,1.43e-08,3;UBERON:0000365,2.13e-08,5;UBERON:0004815,1.04e-07,3;UBERON:0002031,1.04e-07,3;UBERON:0005153,2.46e-07,37;UBERON:0005910,5.69e-07,6;UBERON:0000344,7.76e-07,20 | |||
|phase1_expression=0,0,0.563817616383885,1.0007329835313,0.893922188854576,0,0,0,0,3.19454117451962,0.697801167972428,1.31064823278103,0.263766978228454,0,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0.547497700291537,0,0,0,0,0,0,0,1.83884244895785,2.71085326900425,1.84877005083394,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,1.7261543539329,0.512321413058201,1.6553756092201,0.689491361473237,0.645484683583826,0,0,0,0,1.22433556948361,0.641858054152187,1.91801137739712,0,0,0,3.19230162491442,0,4.35975574296902,0.251248665256743,0.521482918420201,0.217188844705117,1.81619850790011,3.31449872388808,4.43047342417238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.351339142772504,0.0654895377488563,0.728590576585084,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0,0,0.264818361626438,0.573673241497627,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0,0,0.302714855289863,3.45705554687999,0,0.312160076830321,0.570471821544449,0.149448680551801,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0.847727604638247,0.600182192168805,0.309157587715317,0.257640540045629,0.18611685633159,1.0126579934476,0.487185025805993,0.252433774244115,0.276149695926898,0,0.355009592516614,0.10075209822764,0.169560592310488,3.67195621010264,8.45512973831587,4.87567812161307,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0,0.237270619111097,0,0,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,4.2802611309364,0,3.51851403440708,2.12953423864618,0.325808305310325,0,1.44331342025273,0,0.352226082707465,0,0,0,0,0,0,0.234004265139238,0,8.43604505880993,5.37542810236351,7.93940544557364,2.14940454486836,1.74380363108377,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0.387815147273333,0,0.845302752556,0.531876233169741,0,0,0,0,0.57191197463259,1.08524321078289,0,0.325736184293735,1.06617584622764,0,0.602878754119172,0,0.799783929456456,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0.468565659970853,0,0,0,0,0,0.0868836144680828,0,0.686286847621712,0,0,0,0,1.66435439510497,0,0.744323423456331,0.767309866440312,0.841980283299221,0.384417447767103,0,0.482561763430822,0,0.154209693802656,0.887808626565635,0.0821271560138091,0,1.04589340613963,0.120859449591622,5.61418116849198,0.460404944679482,1.60740227430449,0.182091168006717,0.393373244878272,0,0.15403067420883,0,1.46139224653261,1.26661954671451,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0,0.082509499920588,1.14853107599234,1.30012049207304,1.6068392984416,0,0.154048617114644,0,0.413509717453592,0.107420244868274,0,0,0,4.62797763010739,8.64855303142978,4.8492830747942,1.2138933702666,0,1.5740617341532,0.6970372701606,0,0,0,0,0,1.48863347743867,0,0.571890581771475,0,0,0,0,1.43897966066652,0.54907405947211,0.942499218765491,0.404364963146632,0,0,0.975267478179181,0,0,0.136499911407986,1.27264888758341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,1.92444225451024,0.670302275535787,1.08890984861323,0.0941438007767792,3.44404298136984,8.42357378338128,3.99087138183008,2.75668080248351,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.593929361665277,1.53580351049616,0.994147647766298,0.562677665642051,0.222617410045812,0,0,0,0,0,0,0,1.24415835064723,1.61763032065188,1.43216939740487,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0.291604613383254,0,0.885741385813839,0.361789315876224,0,0,0,0.219385397153973,0,0.41827123283581,0.230850775511391,0.455768223388005,0.69169171316418,0.0897576444097721,0,0.638002319463839,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,1.21491816834592,0.685946781900644,0.957651272384428,0.34945333648406,0,0,0.0730893170861856,0,0,0,0.225980740780532,0,0,0,0,1.20238230377301,0.213452994739353,1.19885765749278,0.144090417154106,0,0,0.432164393964449,0,0.471388069233591,0.271808412147228,0,0.203996435272644,0,0,0.410716136675979,0,0.429765441419957,0,0,0.687481272035051,0,0,0.429226048136571,0,0.201550417460179,0.360299883542404,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.408610218334727,0,0.137539436597234,0,0,0,0,0.670869375198532,0.0788057072991982,0,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.904980694530854,0,0,0.704815022316672,0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| ||
|short_description=p@chr1:94996081..94996103,- | |short_description=p@chr1:94996081..94996103,- | ||
}} | }} |
Latest revision as of 11:32, 28 July 2015
Short description: | p@chr1:94996081..94996103, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94996081..94996103, - |
Coexpression cluster: | C935_Small_Mallassezderived_Gingival_normal_mucinous_Urothelial_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.46e-22 | 42 |
respiratory epithelial cell | 2.12e-16 | 13 |
epithelial cell | 9.55e-16 | 253 |
endodermal cell | 4.05e-14 | 58 |
transitional epithelial cell | 1.56e-10 | 4 |
urothelial cell | 1.56e-10 | 4 |
epithelial cell of Malassez | 1.04e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.05e-08 | 9 |
epithelial cell of lower respiratory tract | 1.05e-08 | 9 |
gingival epithelial cell | 1.43e-08 | 3 |
epithelial cell of alimentary canal | 1.69e-08 | 20 |
bronchial epithelial cell | 1.04e-07 | 3 |
general ecto-epithelial cell | 1.36e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.13e-10 | 160 |
endoderm | 2.13e-10 | 160 |
presumptive endoderm | 2.13e-10 | 160 |
endo-epithelium | 8.25e-10 | 82 |
gingival epithelium | 1.43e-08 | 3 |
urothelium | 2.13e-08 | 5 |
lower respiratory tract epithelium | 1.04e-07 | 3 |
epithelium of bronchus | 1.04e-07 | 3 |
epithelial bud | 2.46e-07 | 37 |
transitional epithelium | 5.69e-07 | 6 |
mucosa | 7.76e-07 | 20 |