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FFCP PHASE1:Hg19::chr2:104490710..104490719,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=
|EntrezGene=
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA
|HGNC=
|HGNC=
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-48bp_to_ENST00000537492_5end
|association_with_transcript=-48bp_to_ENST00000537492_5end
|cluster_id=chr2:104490710..104490719,+
|coexpression_cluster_id=C545
|description=CAGE_peak_2_at_ENST00000537492_5end
|description=CAGE_peak_2_at_ENST00000537492_5end
|id=chr2:104490710..104490719,+
|id=chr2:104490710..104490719,+
|ontology_enrichment_celltype=CL:0002605!6.66e-33!3;CL:0000047!1.11e-21!8;CL:0002319!8.01e-19!25;CL:0000540!1.12e-16!6;CL:0000031!1.12e-16!6;CL:0000404!1.12e-16!6;CL:0000128!1.76e-14!7;CL:0000126!1.76e-14!7;CL:0000127!1.76e-14!7;CL:0002453!1.76e-14!7;CL:0000133!2.72e-10!59;CL:0000221!1.92e-08!71
|ontology_enrichment_celltype=CL:0002605!6.66e-33!3;CL:0000047!1.11e-21!8;CL:0002319!8.01e-19!25;CL:0000540!1.12e-16!6;CL:0000031!1.12e-16!6;CL:0000404!1.12e-16!6;CL:0000128!1.76e-14!7;CL:0000126!1.76e-14!7;CL:0000127!1.76e-14!7;CL:0002453!1.76e-14!7;CL:0000133!2.72e-10!59;CL:0000221!1.92e-08!71
|ontology_enrichment_celltype_v019=CL:0002605;1.25e-54;3!CL:0002319;4.45e-24;25!CL:0000128;6.62e-24;7!CL:0000126;6.62e-24;7!CL:0000127;6.62e-24;7!CL:0000540;3.34e-13;6!CL:0000404;3.34e-13;6!CL:0000047;2.07e-10;2!CL:0000243;3.03e-10;15!CL:0000125;3.03e-10;15!CL:0000095;3.15e-09;17
|ontology_enrichment_celltype_v019_2=CL:0002605,7.24e-55,3;CL:0002319,3.95e-24,25;CL:0000128,5.23e-24,7;CL:0000126,5.23e-24,7;CL:0000127,5.23e-24,7;CL:0002453,5.23e-24,7;CL:0000047,3.66e-21,8;CL:0000540,3.34e-13,6;CL:0000031,3.34e-13,6;CL:0000404,3.34e-13,6;CL:0000133,1.24e-10,59;CL:0000243,2.76e-10,15;CL:0000125,2.76e-10,15;CL:0000030,2.76e-10,15;CL:0000339,2.76e-10,15;CL:0000095,2.89e-09,17;CL:0000123,2.89e-09,17;CL:0000221,9.88e-09,72
|ontology_enrichment_development_v019=CL:0000031;3.34e-13;6!CL:0000339;3.03e-10;15!CL:0000133;5.76e-10;59
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002046!4.54e-33!5;UBERON:0004117!4.54e-33!5;UBERON:0007689!4.54e-33!5;UBERON:0007123!4.54e-33!5;UBERON:0003091!4.54e-33!5;UBERON:0009722!3.18e-15!11;UBERON:0007690!3.18e-15!11;UBERON:0002791!1.35e-14!33;UBERON:0000956!2.20e-14!25;UBERON:0000203!2.20e-14!25;UBERON:0001893!3.68e-14!34;UBERON:0001017!1.02e-13!82;UBERON:0005743!5.08e-13!86;UBERON:0002780!1.08e-11!41;UBERON:0001890!1.08e-11!41;UBERON:0006240!1.08e-11!41;UBERON:0000073!1.15e-11!94;UBERON:0001016!1.15e-11!94;UBERON:0002336!1.63e-11!1;UBERON:0001018!1.63e-11!1;UBERON:0002473!1.63e-11!1;UBERON:0005340!1.63e-11!1;UBERON:0002316!1.63e-11!1;UBERON:0003544!1.63e-11!1;UBERON:0001020!1.63e-11!1;UBERON:0005970!1.63e-11!1;UBERON:0002437!1.63e-11!1;UBERON:0003080!2.10e-11!42;UBERON:0001869!2.99e-11!32;UBERON:0008814!3.12e-11!15;UBERON:0002020!1.38e-10!34;UBERON:0003528!1.38e-10!34;UBERON:0003056!5.62e-10!61;UBERON:0001049!2.81e-08!57;UBERON:0005068!2.81e-08!57;UBERON:0006241!2.81e-08!57;UBERON:0007135!2.81e-08!57;UBERON:0002616!5.60e-08!59;UBERON:0004121!4.36e-07!169;UBERON:0000924!6.95e-07!173;UBERON:0006601!6.95e-07!173;UBERON:0003075!7.75e-07!86;UBERON:0007284!7.75e-07!86
|ontology_enrichment_uberon=UBERON:0002046!4.54e-33!5;UBERON:0004117!4.54e-33!5;UBERON:0007689!4.54e-33!5;UBERON:0007123!4.54e-33!5;UBERON:0003091!4.54e-33!5;UBERON:0009722!3.18e-15!11;UBERON:0007690!3.18e-15!11;UBERON:0002791!1.35e-14!33;UBERON:0000956!2.20e-14!25;UBERON:0000203!2.20e-14!25;UBERON:0001893!3.68e-14!34;UBERON:0001017!1.02e-13!82;UBERON:0005743!5.08e-13!86;UBERON:0002780!1.08e-11!41;UBERON:0001890!1.08e-11!41;UBERON:0006240!1.08e-11!41;UBERON:0000073!1.15e-11!94;UBERON:0001016!1.15e-11!94;UBERON:0002336!1.63e-11!1;UBERON:0001018!1.63e-11!1;UBERON:0002473!1.63e-11!1;UBERON:0005340!1.63e-11!1;UBERON:0002316!1.63e-11!1;UBERON:0003544!1.63e-11!1;UBERON:0001020!1.63e-11!1;UBERON:0005970!1.63e-11!1;UBERON:0002437!1.63e-11!1;UBERON:0003080!2.10e-11!42;UBERON:0001869!2.99e-11!32;UBERON:0008814!3.12e-11!15;UBERON:0002020!1.38e-10!34;UBERON:0003528!1.38e-10!34;UBERON:0003056!5.62e-10!61;UBERON:0001049!2.81e-08!57;UBERON:0005068!2.81e-08!57;UBERON:0006241!2.81e-08!57;UBERON:0007135!2.81e-08!57;UBERON:0002616!5.60e-08!59;UBERON:0004121!4.36e-07!169;UBERON:0000924!6.95e-07!173;UBERON:0006601!6.95e-07!173;UBERON:0003075!7.75e-07!86;UBERON:0007284!7.75e-07!86
|ontology_enrichment_uberon_v019=UBERON:0000956;1.08e-24;25!UBERON:0000203;1.08e-24;25!UBERON:0002791;5.46e-19;32!UBERON:0001869;7.19e-19;32!UBERON:0003528;9.97e-18;34!UBERON:0002020;9.97e-18;34!UBERON:0001893;2.39e-16;34!UBERON:0002780;1.40e-12;41!UBERON:0001890;1.40e-12;41!UBERON:0000922;6.59e-09;49!UBERON:0000073;6.98e-09;53!UBERON:0002616;6.98e-09;53!UBERON:0001950;2.85e-08;20!UBERON:0002619;1.33e-07;22!UBERON:0002114;2.32e-07;2!UBERON:0000955;6.50e-07;68
|ontology_enrichment_uberon_v019_2=UBERON:0000956,9.90e-25,25;UBERON:0000203,9.90e-25,25;UBERON:0002791,1.75e-19,32;UBERON:0001869,1.75e-19,32;UBERON:0003528,2.28e-18,34;UBERON:0002020,2.28e-18,34;UBERON:0001893,2.28e-18,34;UBERON:0001017,4.49e-17,81;UBERON:0001016,2.36e-15,89;UBERON:0002780,2.69e-15,41;UBERON:0001890,2.69e-15,41;UBERON:0003080,2.69e-15,41;UBERON:0006240,2.69e-15,41;UBERON:0000073,7.11e-12,53;UBERON:0002616,7.11e-12,53;UBERON:0001049,3.05e-11,56;UBERON:0005068,3.05e-11,56;UBERON:0006241,3.05e-11,56;UBERON:0007135,3.05e-11,56;UBERON:0003056,2.53e-10,61;UBERON:0000955,4.00e-09,68;UBERON:0006238,4.00e-09,68;UBERON:0001950,2.92e-08,20;UBERON:0004121,8.08e-08,171;UBERON:0000924,8.08e-08,171;UBERON:0006601,8.08e-08,171;UBERON:0003075,1.16e-07,82;UBERON:0007284,1.16e-07,82;UBERON:0002619,1.36e-07,22;UBERON:0002114,2.47e-07,2;UBERON:0002346,2.66e-07,86;UBERON:0011216,2.78e-07,223
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|short_description=p2@ENST00000537492
|short_description=p2@ENST00000537492
}}
}}

Latest revision as of 22:54, 28 July 2015

Short description:p2@ENST00000537492
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_ENST00000537492_5end
Coexpression cluster:C545_Astrocyte_Neural_Neurons_parietal_neuroectodermal_occipital_temporal
Association with transcript: -48bp_to_ENST00000537492_5end
EntrezGene:NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data