FFCP PHASE1:Hg19::chr17:76268898..76268907,+: Difference between revisions
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|id=chr17:76268898..76268907,+
|short_description=p@chr17:76268898..76268907,+
|description=CAGE_peak_at_chr17:76268898..76268907,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:76268898..76268907,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr17:76268898..76268907,+ | |||
|id=chr17:76268898..76268907,+ | |||
|ontology_enrichment_celltype=CL:0000624!9.03e-10!6;CL:0002057!1.49e-09!42;CL:0000860!9.65e-09!45;CL:0000815!2.20e-08!2;CL:0000792!2.20e-08!2;CL:0002677!2.20e-08!2;CL:0000766!5.45e-08!76;CL:0000839!9.49e-08!70;CL:0000557!1.35e-07!71;CL:0002274!3.87e-07!5;CL:0000457!3.87e-07!5;CL:0002191!3.87e-07!5;CL:0000097!3.87e-07!5;CL:0000831!3.87e-07!5;CL:0002028!3.87e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.41e-09!102;UBERON:0003061!9.41e-09!102;UBERON:0002193!1.83e-08!112;UBERON:0006562!1.71e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.32e-57;2!UBERON:0005058;2.32e-57;2!UBERON:0009113;2.32e-57;2!UBERON:0004177;1.08e-23;5!UBERON:0005057;1.08e-23;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.74e-29,4;UBERON:0005058,2.74e-29,4;UBERON:0009113,2.74e-29,4;UBERON:0003295,2.74e-29,4;UBERON:0005562,2.74e-29,4;UBERON:0003351,6.48e-20,6;UBERON:0004177,3.15e-17,7;UBERON:0005057,3.15e-17,7;UBERON:0000974,2.24e-12,10;UBERON:0003408,2.24e-12,10;UBERON:0001042,2.24e-12,10;UBERON:0009145,2.24e-12,10;UBERON:0006562,2.42e-11,11;UBERON:0009722,2.42e-11,11;UBERON:0007690,2.42e-11,11;UBERON:0008814,2.68e-07,18;UBERON:0001557,5.84e-07,19 | |||
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| ||
|short_description=p@chr17:76268898..76268907,+ | |||
}} | }} |
Latest revision as of 21:56, 25 July 2015
Short description: | p@chr17:76268898..76268907, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76268898..76268907, + |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.74e-29 | 4 |
hemolymphoid system gland | 2.74e-29 | 4 |
thymic region | 2.74e-29 | 4 |
pharyngeal gland | 2.74e-29 | 4 |
thymus primordium | 2.74e-29 | 4 |
pharyngeal epithelium | 6.48e-20 | 6 |
hemopoietic organ | 3.15e-17 | 7 |
immune organ | 3.15e-17 | 7 |
neck | 2.24e-12 | 10 |
gland of gut | 2.24e-12 | 10 |
chordate pharynx | 2.24e-12 | 10 |
pharyngeal region of foregut | 2.24e-12 | 10 |
pharynx | 2.42e-11 | 11 |
entire pharyngeal arch endoderm | 2.42e-11 | 11 |
early pharyngeal endoderm | 2.42e-11 | 11 |
pharyngeal arch system | 2.68e-07 | 18 |
upper respiratory tract | 5.84e-07 | 19 |