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FFCP PHASE1:Hg19::chr17:79827808..79827852,-: Difference between revisions

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(Created page with "{{FFCP |id=chr17:79827808..79827852,- |short_description=p8@ARHGDIA |description=CAGE_peak_8_at_ARHGDIA_5end |association_with_transcript=0bp_to_uc002kbp.2,uc002kbt.1_5end...")
 
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{{FFCP
{{FFCP
|id=chr17:79827808..79827852,-
|DHSsupport=supported 
|short_description=p8@ARHGDIA
|DPIdataset=robust
|description=CAGE_peak_8_at_ARHGDIA_5end
|association_with_transcript=0bp_to_uc002kbp.2,uc002kbt.1_5end
|EntrezGene=396
|EntrezGene=396
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=678
|HGNC=678
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc002kbp.2,uc002kbt.1_5end
|cluster_id=chr17:79827808..79827852,-
|description=CAGE_peak_8_at_ARHGDIA_5end
|id=chr17:79827808..79827852,-
|ontology_enrichment_celltype=CL:0002371!8.62e-25!591;CL:0000144!1.28e-22!625;CL:0000548!2.40e-18!679;CL:0000004!2.40e-18!679;CL:0000255!2.40e-18!679;CL:0000012!3.40e-17!682;CL:0000220!5.66e-13!246;CL:0002321!2.81e-12!248;CL:0000055!8.55e-12!180;CL:0000222!9.34e-12!119;CL:0000003!4.50e-11!722;CL:0000063!3.84e-10!578;CL:0000723!4.38e-10!436;CL:0000048!4.51e-09!430;CL:0000034!2.56e-08!444;CL:0000192!5.52e-08!42;CL:0000514!5.52e-08!42;CL:0002057!6.50e-08!42;CL:0000860!1.14e-07!45;CL:0000071!3.11e-07!18;CL:0002546!3.11e-07!18;CL:0000115!3.30e-07!35;CL:0000359!3.47e-07!32;CL:0000680!5.78e-07!57;CL:0000056!5.78e-07!57;CL:0000355!5.78e-07!57;CL:0000183!8.44e-07!59
|ontology_enrichment_celltype_v019=CL:0000860;3.50e-10;33!CL:0002057;3.50e-10;33!CL:0000473;2.32e-07;39!CL:0000234;2.32e-07;39!CL:0000359;8.55e-07;32!CL:0000071;8.79e-07;18
|ontology_enrichment_celltype_v019_2=CL:0000222,1.50e-11,121;CL:0002321,2.38e-11,250;CL:0000723,5.52e-11,433;CL:0000048,7.12e-10,427;CL:0000034,1.75e-09,441;CL:0000860,6.71e-08,42;CL:0002057,6.71e-08,42;CL:0000115,7.43e-08,36;CL:0000071,1.48e-07,18;CL:0002546,1.48e-07,18;CL:0000192,2.25e-07,43;CL:0000514,2.25e-07,43;CL:0000473,3.08e-07,48;CL:0000234,3.08e-07,48;CL:0000359,4.44e-07,32
|ontology_enrichment_development_v019=CL:0002546;8.79e-07;18
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!1.21e-16!448;UBERON:0004120!1.21e-16!448;UBERON:0006603!1.21e-16!448;UBERON:0003081!1.87e-15!216;UBERON:0001981!2.39e-13!60;UBERON:0007500!2.39e-13!60;UBERON:0004537!2.39e-13!60;UBERON:0006965!2.39e-13!60;UBERON:0003914!2.00e-12!118;UBERON:0002049!7.64e-12!79;UBERON:0007798!7.64e-12!79;UBERON:0000055!9.42e-12!69;UBERON:0001637!1.13e-11!42;UBERON:0003509!1.13e-11!42;UBERON:0004572!1.13e-11!42;UBERON:0000923!3.82e-11!604;UBERON:0005291!3.82e-11!604;UBERON:0006598!3.82e-11!604;UBERON:0002532!3.82e-11!604;UBERON:0004872!5.37e-11!84;UBERON:0002204!6.67e-11!167;UBERON:0002050!7.74e-11!605;UBERON:0005423!7.74e-11!605;UBERON:0005256!1.83e-10!143;UBERON:0000467!3.43e-10!625;UBERON:0000480!6.14e-10!626;UBERON:0000468!1.01e-09!659;UBERON:0000922!2.41e-09!612;UBERON:0000914!2.63e-08!83;UBERON:0002329!2.63e-08!83;UBERON:0003077!2.63e-08!83;UBERON:0003059!2.63e-08!83;UBERON:0007282!2.63e-08!83;UBERON:0009618!2.63e-08!83;UBERON:0007285!2.63e-08!83;UBERON:0000490!6.36e-08!138;UBERON:0004290!1.17e-07!70;UBERON:0002100!1.70e-07!216;UBERON:0000487!1.77e-07!22;UBERON:0004573!2.38e-07!33;UBERON:0004571!2.38e-07!33;UBERON:0000486!2.69e-07!82;UBERON:0001986!3.11e-07!18;UBERON:0004638!3.11e-07!18;UBERON:0004852!3.11e-07!18;UBERON:0004535!6.87e-07!110
|ontology_enrichment_uberon_v019=UBERON:0001637;8.10e-09;42!UBERON:0003509;8.10e-09;42!UBERON:0004572;8.10e-09;42!UBERON:0003914;1.04e-07;74!UBERON:0007500;1.33e-07;56!UBERON:0001981;1.33e-07;56!UBERON:0004537;1.33e-07;56!UBERON:0000487;2.28e-07;22!UBERON:0004638;8.79e-07;18!UBERON:0001986;8.79e-07;18!UBERON:0004852;8.79e-07;18
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|short_description=p8@ARHGDIA
}}
}}

Latest revision as of 09:10, 18 September 2015

Short description:p8@ARHGDIA
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_8_at_ARHGDIA_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_uc002kbp.2, uc002kbt.1_5end
EntrezGene:ARHGDIA
HGNC: 678
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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2.5
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7.5
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15.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data