FFCP PHASE1:Hg19::chr11:9588526..9588534,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:9588526..9588534,+ | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr11:9588526..9588534,+ | |description=CAGE_peak_at_chr11:9588526..9588534,+ | ||
|id=chr11:9588526..9588534,+ | |id=chr11:9588526..9588534,+ | ||
|ontology_enrichment_celltype=CL:0002195!9.32e-16!2;CL:0002571!9.32e-16!2;CL:0002568!1.59e-08!1;CL:0002557!2.46e-08!1;CL:1000306!2.75e-08!4;CL:0002547!2.75e-08!4;CL:0000569!4.08e-08!4;CL:0000011!4.08e-08!4 | |ontology_enrichment_celltype=CL:0002195!9.32e-16!2;CL:0002571!9.32e-16!2;CL:0002568!1.59e-08!1;CL:0002557!2.46e-08!1;CL:1000306!2.75e-08!4;CL:0002547!2.75e-08!4;CL:0000569!4.08e-08!4;CL:0000011!4.08e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002195;5.48e-40;2!CL:0002571;5.48e-40;2!CL:0000134;2.82e-12;55!CL:0000048;3.13e-12;58!CL:0000723;4.11e-11;61!CL:0000034;4.27e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,6.70e-40,2;CL:0002571,6.70e-40,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.20e-50!14;DOID:120!2.37e-25!27;DOID:193!1.73e-23!29 | |ontology_enrichment_disease=DOID:2394!2.20e-50!14;DOID:120!2.37e-25!27;DOID:193!1.73e-23!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.87e-35;14!DOID:120;1.60e-18;27!DOID:193;2.92e-17;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.94e-35,14;DOID:120,1.63e-18,27;DOID:193,2.97e-17,29 | |||
|ontology_enrichment_uberon=UBERON:0002118!4.96e-36!5;UBERON:0004532!4.96e-36!5;UBERON:0000992!1.54e-34!13;UBERON:0000991!5.55e-21!21;UBERON:0009196!5.55e-21!21;UBERON:0009117!5.55e-21!21;UBERON:0005564!5.55e-21!21;UBERON:0004176!5.58e-20!22;UBERON:0002119!5.28e-17!4;UBERON:0004531!5.28e-17!4;UBERON:0003134!1.96e-11!37;UBERON:0000474!1.96e-11!37;UBERON:0010188!2.16e-10!3;UBERON:0002539!2.16e-10!3;UBERON:0008816!2.16e-10!3;UBERON:0003100!3.29e-10!41;UBERON:0002323!5.61e-09!46;UBERON:0003133!1.48e-08!48;UBERON:0005705!1.71e-08!1;UBERON:0008193!1.71e-08!1;UBERON:0002514!1.71e-08!1;UBERON:0003462!1.71e-08!1;UBERON:0008001!1.71e-08!1;UBERON:0007914!1.71e-08!1;UBERON:0003457!1.71e-08!1;UBERON:0009292!1.71e-08!1;UBERON:0007375!1.71e-08!1;UBERON:0003323!1.71e-08!1;UBERON:0002397!1.71e-08!1;UBERON:0001709!1.71e-08!1;UBERON:0004066!1.71e-08!1;UBERON:0002244!1.71e-08!1;UBERON:0005620!1.71e-08!1;UBERON:0004068!1.71e-08!1;UBERON:0004362!1.71e-08!1;UBERON:0004458!2.33e-08!49;UBERON:0000415!2.75e-08!4;UBERON:0007240!2.75e-08!4;UBERON:0005742!2.75e-08!4;UBERON:0005734!2.75e-08!4;UBERON:0004664!2.75e-08!4;UBERON:0004663!2.75e-08!4;UBERON:0005156!9.37e-07!59;UBERON:0000990!9.37e-07!59;UBERON:0001048!9.53e-07!168 | |ontology_enrichment_uberon=UBERON:0002118!4.96e-36!5;UBERON:0004532!4.96e-36!5;UBERON:0000992!1.54e-34!13;UBERON:0000991!5.55e-21!21;UBERON:0009196!5.55e-21!21;UBERON:0009117!5.55e-21!21;UBERON:0005564!5.55e-21!21;UBERON:0004176!5.58e-20!22;UBERON:0002119!5.28e-17!4;UBERON:0004531!5.28e-17!4;UBERON:0003134!1.96e-11!37;UBERON:0000474!1.96e-11!37;UBERON:0010188!2.16e-10!3;UBERON:0002539!2.16e-10!3;UBERON:0008816!2.16e-10!3;UBERON:0003100!3.29e-10!41;UBERON:0002323!5.61e-09!46;UBERON:0003133!1.48e-08!48;UBERON:0005705!1.71e-08!1;UBERON:0008193!1.71e-08!1;UBERON:0002514!1.71e-08!1;UBERON:0003462!1.71e-08!1;UBERON:0008001!1.71e-08!1;UBERON:0007914!1.71e-08!1;UBERON:0003457!1.71e-08!1;UBERON:0009292!1.71e-08!1;UBERON:0007375!1.71e-08!1;UBERON:0003323!1.71e-08!1;UBERON:0002397!1.71e-08!1;UBERON:0001709!1.71e-08!1;UBERON:0004066!1.71e-08!1;UBERON:0002244!1.71e-08!1;UBERON:0005620!1.71e-08!1;UBERON:0004068!1.71e-08!1;UBERON:0004362!1.71e-08!1;UBERON:0004458!2.33e-08!49;UBERON:0000415!2.75e-08!4;UBERON:0007240!2.75e-08!4;UBERON:0005742!2.75e-08!4;UBERON:0005734!2.75e-08!4;UBERON:0004664!2.75e-08!4;UBERON:0004663!2.75e-08!4;UBERON:0005156!9.37e-07!59;UBERON:0000990!9.37e-07!59;UBERON:0001048!9.53e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;8.47e-17;5!UBERON:0000992;2.55e-14;13!UBERON:0000991;4.13e-09;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,8.82e-17,5;UBERON:0000992,2.61e-14,13;UBERON:0000991,4.19e-09,21;UBERON:0009196,4.19e-09,21;UBERON:0009117,4.19e-09,21;UBERON:0005564,4.19e-09,21;UBERON:0004176,1.02e-08,22 | |||
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|short_description=p@chr11:9588526..9588534,+ | |short_description=p@chr11:9588526..9588534,+ | ||
}} | }} |
Latest revision as of 03:45, 24 July 2015
Short description: | p@chr11:9588526..9588534, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:9588526..9588534, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 6.70e-40 | 2 |
hepatic mesenchymal stem cell | 6.70e-40 | 2 |
Ontology term | p-value | n |
---|---|---|
right ovary | 8.82e-17 | 5 |
female gonad | 2.61e-14 | 13 |
gonad | 4.19e-09 | 21 |
indifferent external genitalia | 4.19e-09 | 21 |
indifferent gonad | 4.19e-09 | 21 |
gonad primordium | 4.19e-09 | 21 |
external genitalia | 1.02e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.94e-35 | 14 |
female reproductive organ cancer | 1.63e-18 | 27 |
reproductive organ cancer | 2.97e-17 | 29 |