FFCP PHASE1:Hg19::chr18:20493912..20493923,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:20493912..20493923,+
|short_description=p@chr18:20493912..20493923,+
|description=CAGE_peak_at_chr18:20493912..20493923,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:20493912..20493923,+ | |||
|description=CAGE_peak_at_chr18:20493912..20493923,+ | |||
|id=chr18:20493912..20493923,+ | |||
|ontology_enrichment_celltype=CL:0002076!7.17e-24!43;CL:0002166!9.13e-22!3;CL:0002621!1.48e-21!3;CL:0002159!1.55e-18!13;CL:0000223!1.00e-16!59;CL:0002251!6.69e-15!21;CL:0000066!3.17e-13!254;CL:0002368!8.58e-13!13;CL:0000622!1.24e-12!5;CL:0000154!1.30e-10!6;CL:0000240!1.75e-10!6;CL:0000311!1.75e-10!6;CL:0000079!1.75e-10!6;CL:0000237!1.75e-10!6;CL:0000036!1.75e-10!6;CL:0000357!1.75e-10!6;CL:0000114!1.75e-10!6;CL:0002623!9.38e-10!3;CL:0000362!4.24e-08!8;CL:0002327!5.60e-08!4;CL:0002336!6.63e-08!1;CL:0002261!6.63e-08!1;CL:0002170!6.63e-08!1;CL:0000313!9.29e-08!1;CL:1001319!1.14e-07!1;CL:1000600!1.14e-07!1;CL:0000150!3.14e-07!9;CL:0002077!5.68e-07!33;CL:0002321!7.86e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002166;2.75e-74;3!CL:0002621;5.51e-34;3!CL:0002327;1.05e-25;4!CL:0002159;1.26e-16;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.75e-74,3;CL:0002621,5.51e-34,3;CL:0002327,1.11e-25,4;CL:0002159,1.26e-16,14;CL:0002077,3.08e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2152!9.29e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.48e-21!3;UBERON:0001708!1.81e-16!4;UBERON:0001704!1.81e-16!4;UBERON:0001004!3.45e-13!72;UBERON:0002090!3.77e-11!6;UBERON:0000161!3.90e-11!35;UBERON:0000166!4.14e-11!21;UBERON:0000165!5.73e-11!28;UBERON:0000930!5.73e-11!28;UBERON:0003408!1.17e-10!10;UBERON:0001828!2.12e-08!8;UBERON:0001911!5.60e-08!4;UBERON:0005333!5.60e-08!4;UBERON:0008425!5.60e-08!4;UBERON:0005311!5.60e-08!4;UBERON:0003102!6.76e-08!95;UBERON:0004911!9.29e-08!1;UBERON:0004645!1.14e-07!1;UBERON:0001256!1.14e-07!1;UBERON:0001259!1.14e-07!1;UBERON:0002370!2.14e-07!4;UBERON:0005058!2.14e-07!4;UBERON:0009113!2.14e-07!4;UBERON:0003295!2.14e-07!4;UBERON:0005562!2.14e-07!4;UBERON:0004119!7.23e-07!169;UBERON:0000925!7.23e-07!169;UBERON:0006595!7.23e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;5.53e-56;4!UBERON:0008895;5.53e-56;4!UBERON:0011159;5.45e-45;5!UBERON:0001949;5.51e-34;3!UBERON:0001911;1.05e-25;4!UBERON:0011137;6.11e-21;11!UBERON:0010323;6.11e-21;11!UBERON:0003929;3.29e-15;7!UBERON:0000075;1.22e-14;16!UBERON:0003350;1.94e-13;8!UBERON:0001828;1.94e-13;8!UBERON:0000486;2.77e-09;12!UBERON:0004765;2.82e-09;26!UBERON:0003729;1.22e-08;13!UBERON:0001434;6.01e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,5.53e-56,4;UBERON:0008895,5.53e-56,4;UBERON:0011159,5.45e-45,5;UBERON:0010188,1.18e-37,6;UBERON:0002539,1.18e-37,6;UBERON:0008816,1.18e-37,6;UBERON:0001949,5.51e-34,3;UBERON:0001911,1.11e-25,4;UBERON:0005333,1.11e-25,4;UBERON:0008425,1.11e-25,4;UBERON:0005311,1.11e-25,4;UBERON:0010323,6.11e-21,11;UBERON:0011137,1.26e-16,14;UBERON:0000075,1.22e-14,16;UBERON:0003350,1.94e-13,8;UBERON:0001828,1.94e-13,8;UBERON:0000076,2.20e-13,8;UBERON:0008814,4.27e-13,18;UBERON:0000033,2.43e-11,56;UBERON:0000153,2.89e-10,62;UBERON:0007811,2.89e-10,62;UBERON:0003729,1.22e-08,13 | |||
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|short_description=p@chr18:20493912..20493923,+ | |||
}} | }} |
Latest revision as of 23:55, 25 July 2015
Short description: | p@chr18:20493912..20493923, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:20493912..20493923, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 2.75e-74 | 3 |
gingival epithelial cell | 5.51e-34 | 3 |
mammary gland epithelial cell | 1.11e-25 | 4 |
general ecto-epithelial cell | 1.26e-16 | 14 |
ecto-epithelial cell | 3.08e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 5.53e-56 | 4 |
splanchnocranium | 5.53e-56 | 4 |
primary subdivision of cranial skeletal system | 5.45e-45 | 5 |
protuberance | 1.18e-37 | 6 |
pharyngeal arch | 1.18e-37 | 6 |
embryonic head | 1.18e-37 | 6 |
gingival epithelium | 5.51e-34 | 3 |
mammary gland | 1.11e-25 | 4 |
mammary bud | 1.11e-25 | 4 |
mammary ridge | 1.11e-25 | 4 |
mammary placode | 1.11e-25 | 4 |
cranial skeletal system | 6.11e-21 | 11 |
axial skeletal system | 1.26e-16 | 14 |
subdivision of skeletal system | 1.22e-14 | 16 |
epithelium of mucosa | 1.94e-13 | 8 |
gingiva | 1.94e-13 | 8 |
external ectoderm | 2.20e-13 | 8 |
pharyngeal arch system | 4.27e-13 | 18 |
head | 2.43e-11 | 56 |
anterior region of body | 2.89e-10 | 62 |
craniocervical region | 2.89e-10 | 62 |
mouth mucosa | 1.22e-08 | 13 |