FFCP PHASE1:Hg19::chr18:21487848..21487862,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:21487848..21487862,-
|short_description=p@chr18:21487848..21487862,-
|description=CAGE_peak_at_chr18:21487848..21487862,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:21487848..21487862,- | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21487848..21487862,- | |||
|id=chr18:21487848..21487862,- | |||
|ontology_enrichment_celltype=CL:0002076!7.97e-32!43;CL:0000223!7.78e-22!59;CL:0002368!2.17e-18!13;CL:0000066!4.14e-17!254;CL:0002251!1.41e-13!21;CL:0002166!1.90e-13!3;CL:0002621!3.09e-13!3;CL:0000068!8.13e-13!3;CL:0000069!8.13e-13!3;CL:0000307!8.13e-13!3;CL:0000377!8.13e-13!3;CL:0002202!6.22e-11!9;CL:0002632!6.22e-11!9;CL:0002327!4.26e-10!4;CL:0002536!1.10e-08!2;CL:0002159!6.10e-08!13;CL:0002537!1.05e-07!5;CL:0000240!7.82e-07!6;CL:0000311!7.82e-07!6;CL:0000079!7.82e-07!6;CL:0000237!7.82e-07!6;CL:0000036!7.82e-07!6;CL:0000357!7.82e-07!6;CL:0000114!7.82e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002166;4.42e-20;3!CL:0002621;8.65e-20;3!CL:0002159;1.15e-16;14!CL:0002327;2.38e-15;4!CL:0000312;2.00e-12;5!CL:0000240;1.65e-10;6!CL:0000311;1.65e-10;6!CL:0000079;1.65e-10;6!CL:0000237;1.65e-10;6!CL:0002076;1.74e-07;42!CL:0000362;2.68e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,3.32e-20,3;CL:0002621,6.50e-20,3;CL:0002159,1.20e-16,14;CL:0002327,1.79e-15,4;CL:0000312,2.52e-12,5;CL:0000240,1.99e-10,6;CL:0000311,1.99e-10,6;CL:0000079,1.99e-10,6;CL:0000237,1.99e-10,6;CL:0000036,1.99e-10,6;CL:0000357,1.99e-10,6;CL:0000114,1.99e-10,6;CL:0002076,2.13e-08,42;CL:0000066,3.63e-08,253;CL:0000362,3.04e-07,9;CL:0002077,5.28e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;1.65e-10;6!CL:0000114;1.65e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.05e-17!14;UBERON:0000158!8.05e-17!14;UBERON:0000305!7.21e-14!7;UBERON:0001949!3.09e-13!3;UBERON:0004871!4.23e-12!8;UBERON:0001708!3.45e-10!4;UBERON:0001704!3.45e-10!4;UBERON:0001911!4.26e-10!4;UBERON:0005333!4.26e-10!4;UBERON:0008425!4.26e-10!4;UBERON:0005311!4.26e-10!4;UBERON:0004119!2.88e-09!169;UBERON:0000925!2.88e-09!169;UBERON:0006595!2.88e-09!169;UBERON:0000478!2.93e-09!24;UBERON:0001004!7.50e-09!72;UBERON:0001828!2.88e-08!8;UBERON:0000161!1.74e-07!35;UBERON:0004923!2.91e-07!57;UBERON:0002090!6.55e-07!6;UBERON:0007196!6.56e-07!14;UBERON:0001558!6.56e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;8.65e-20;3!UBERON:0001911;2.38e-15;4!UBERON:0001708;2.56e-15;4!UBERON:0008895;2.56e-15;4!UBERON:0011159;1.89e-12;5!UBERON:0000486;3.24e-11;12!UBERON:0003929;4.95e-09;7!UBERON:0003350;5.18e-08;8!UBERON:0001828;5.18e-08;8!UBERON:0010371;1.47e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.50e-20,3;UBERON:0001911,1.79e-15,4;UBERON:0005333,1.79e-15,4;UBERON:0008425,1.79e-15,4;UBERON:0005311,1.79e-15,4;UBERON:0001708,2.07e-15,4;UBERON:0008895,2.07e-15,4;UBERON:0011159,1.59e-12,5;UBERON:0010188,1.36e-10,6;UBERON:0002539,1.36e-10,6;UBERON:0008816,1.36e-10,6;UBERON:0003124,5.16e-09,7;UBERON:0000076,3.38e-08,8;UBERON:0003350,4.66e-08,8;UBERON:0001828,4.66e-08,8 | |||
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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,1.36373060295417,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,2.30475599358114,0,1.20634766893957,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,3.69560682037491,1.70130116690864,4.03013352162817,1.74380363108377,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0.276242966807689,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0.576570202095319,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,1.08890984861323,0,0,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:21487848..21487862,- | |||
}} | }} |
Latest revision as of 00:00, 26 July 2015
Short description: | p@chr18:21487848..21487862, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21487848..21487862, - |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 3.32e-20 | 3 |
gingival epithelial cell | 6.50e-20 | 3 |
general ecto-epithelial cell | 1.20e-16 | 14 |
mammary gland epithelial cell | 1.79e-15 | 4 |
keratinocyte | 2.52e-12 | 5 |
stratified squamous epithelial cell | 1.99e-10 | 6 |
keratin accumulating cell | 1.99e-10 | 6 |
stratified epithelial cell | 1.99e-10 | 6 |
keratinizing barrier epithelial cell | 1.99e-10 | 6 |
epithelial fate stem cell | 1.99e-10 | 6 |
stratified epithelial stem cell | 1.99e-10 | 6 |
surface ectodermal cell | 1.99e-10 | 6 |
endo-epithelial cell | 2.13e-08 | 42 |
epithelial cell | 3.63e-08 | 253 |
epidermal cell | 3.04e-07 | 9 |
ecto-epithelial cell | 5.28e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.50e-20 | 3 |
mammary gland | 1.79e-15 | 4 |
mammary bud | 1.79e-15 | 4 |
mammary ridge | 1.79e-15 | 4 |
mammary placode | 1.79e-15 | 4 |
jaw skeleton | 2.07e-15 | 4 |
splanchnocranium | 2.07e-15 | 4 |
primary subdivision of cranial skeletal system | 1.59e-12 | 5 |
protuberance | 1.36e-10 | 6 |
pharyngeal arch | 1.36e-10 | 6 |
embryonic head | 1.36e-10 | 6 |
chorion | 5.16e-09 | 7 |
external ectoderm | 3.38e-08 | 8 |
epithelium of mucosa | 4.66e-08 | 8 |
gingiva | 4.66e-08 | 8 |