FFCP PHASE1:Hg19::chr18:28682227..28682238,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:28682227..28682238,-
|short_description=p8@DSC2
|description=CAGE_peak_8_at_DSC2_5end
|association_with_transcript=139bp_to_ENST00000280904_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1824 | |EntrezGene=1824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3036 | |HGNC=3036 | ||
|TSSclassifier=strong | |||
|UniProt=Q02487 | |UniProt=Q02487 | ||
|association_with_transcript=139bp_to_ENST00000280904_5end | |||
|cluster_id=chr18:28682227..28682238,- | |||
|coexpression_cluster_id=C629 | |||
|description=CAGE_peak_8_at_DSC2_5end | |||
|id=chr18:28682227..28682238,- | |||
|ontology_enrichment_celltype=CL:0002076!3.14e-19!43;CL:0000223!2.66e-14!59;CL:0002159!2.69e-13!13;CL:0002368!6.86e-12!13;CL:0000066!4.26e-11!254;CL:0000622!2.09e-10!5;CL:0000154!1.48e-08!6;CL:0002251!2.28e-08!21;CL:0002623!7.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002159;4.42e-22;14!CL:0000622;4.18e-21;5!CL:0000154;1.52e-17;6!CL:0002623;3.39e-13;3!CL:0002621;7.53e-13;3!CL:0002166;2.72e-12;3!CL:0000150;1.35e-11;9!CL:0002076;6.67e-11;42!CL:0000317;1.19e-09;2!CL:1000448;1.19e-09;2!CL:0002308;1.19e-09;2!CL:0002140;1.19e-09;2!CL:0000575;2.19e-09;2!CL:0002251;3.76e-09;20!CL:0002077;6.50e-09;34!CL:0000362;1.29e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,5.29e-22,14;CL:0000622,4.02e-21,5;CL:0000154,1.48e-17,6;CL:0002623,3.12e-13,3;CL:0002076,3.26e-13,42;CL:0002621,8.35e-13,3;CL:0002166,3.13e-12,3;CL:0000150,1.32e-11,9;CL:0002077,4.55e-10,34;CL:0000317,1.24e-09,2;CL:1000448,1.24e-09,2;CL:0002308,1.24e-09,2;CL:0002140,1.24e-09,2;CL:0000575,2.06e-09,2;CL:0002251,3.92e-09,20;CL:0000223,8.19e-09,58;CL:0000362,1.41e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.49e-21!169;UBERON:0000925!8.49e-21!169;UBERON:0006595!8.49e-21!169;UBERON:0001004!1.03e-18!72;UBERON:0001007!5.39e-15!155;UBERON:0001555!5.39e-15!155;UBERON:0007026!5.39e-15!155;UBERON:0000166!9.93e-15!21;UBERON:0004921!1.52e-14!129;UBERON:0004185!1.52e-14!129;UBERON:0005631!1.57e-13!14;UBERON:0000158!1.57e-13!14;UBERON:0000161!1.90e-12!35;UBERON:0000077!1.16e-11!130;UBERON:0000165!1.28e-11!28;UBERON:0000930!1.28e-11!28;UBERON:0001044!5.39e-11!6;UBERON:0003293!5.39e-11!6;UBERON:0003294!5.39e-11!6;UBERON:0010047!5.39e-11!6;UBERON:0000167!5.39e-11!6;UBERON:0003408!2.57e-10!10;UBERON:0001041!5.29e-10!98;UBERON:0000065!6.05e-10!53;UBERON:0003124!1.04e-08!7;UBERON:0000062!6.48e-08!511;UBERON:0005178!9.64e-08!34;UBERON:0002224!9.64e-08!34;UBERON:0003102!1.62e-07!95;UBERON:0005181!2.03e-07!35;UBERON:0000078!3.93e-07!18;UBERON:0001444!4.41e-07!48;UBERON:0000064!5.58e-07!219;UBERON:0000478!8.90e-07!24;UBERON:0007196!8.90e-07!14;UBERON:0001558!8.90e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.72e-20;33!UBERON:0001555;1.89e-14;54!UBERON:0001041;1.86e-13;14!UBERON:0000165;5.95e-13;28!UBERON:0001949;7.53e-13;3!UBERON:0000161;1.32e-12;19!UBERON:0000166;1.32e-12;19!UBERON:0001044;4.05e-11;6!UBERON:0003293;4.05e-11;6!UBERON:0003294;4.05e-11;6!UBERON:0010047;4.05e-11;6!UBERON:0003408;4.05e-11;6!UBERON:0000167;4.05e-11;6!UBERON:0000160;4.63e-10;17!UBERON:0005409;7.00e-10;22!UBERON:0002419;1.19e-09;2!UBERON:0007771;1.19e-09;2!UBERON:0003297;1.19e-09;2!UBERON:0001821;1.19e-09;2!UBERON:0003487;1.19e-09;2!UBERON:0001820;1.19e-09;2!UBERON:0001708;2.44e-09;4!UBERON:0008895;2.44e-09;4!UBERON:0002108;1.11e-07;4!UBERON:0011159;1.47e-07;5!UBERON:0001007;2.28e-07;81!UBERON:0005631;7.68e-07;10!UBERON:0000158;7.68e-07;10!UBERON:0001723;7.91e-07;3!UBERON:0001033;7.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,4.94e-17,22;UBERON:0004119,1.92e-15,160;UBERON:0000925,1.92e-15,160;UBERON:0006595,1.92e-15,160;UBERON:0003102,1.28e-14,99;UBERON:0000161,6.04e-14,36;UBERON:0000153,3.29e-13,62;UBERON:0007811,3.29e-13,62;UBERON:0000033,5.25e-13,56;UBERON:0001949,8.35e-13,3;UBERON:0001007,1.85e-12,145;UBERON:0001555,1.85e-12,145;UBERON:0007026,1.85e-12,145;UBERON:0000165,1.94e-12,29;UBERON:0000930,1.94e-12,29;UBERON:0004921,2.06e-12,118;UBERON:0001044,3.84e-11,6;UBERON:0003293,3.84e-11,6;UBERON:0003294,3.84e-11,6;UBERON:0010047,3.84e-11,6;UBERON:0000167,3.84e-11,6;UBERON:0001004,2.64e-10,74;UBERON:0000160,4.64e-10,17;UBERON:0001444,1.12e-09,49;UBERON:0002419,1.24e-09,2;UBERON:0007771,1.24e-09,2;UBERON:0003297,1.24e-09,2;UBERON:0001821,1.24e-09,2;UBERON:0003487,1.24e-09,2;UBERON:0001820,1.24e-09,2;UBERON:0005089,1.24e-09,2;UBERON:0005088,1.24e-09,2;UBERON:0001708,2.71e-09,4;UBERON:0008895,2.71e-09,4;UBERON:0005409,1.31e-08,25;UBERON:0002108,1.21e-07,4;UBERON:0011159,1.60e-07,5;UBERON:0005631,3.88e-07,14;UBERON:0000158,3.88e-07,14;UBERON:0001041,4.12e-07,87;UBERON:0001723,7.81e-07,3;UBERON:0001033,7.81e-07,3;UBERON:0010056,7.81e-07,3 | |||
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| ||
|short_description=p8@DSC2 | |||
}} | }} |
Latest revision as of 04:41, 19 September 2015
Short description: | p8@DSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_DSC2_5end |
Coexpression cluster: | C629_esophagus_amniotic_tongue_throat_tonsil_uterus_salivary |
Association with transcript: | 139bp_to_ENST00000280904_5end |
EntrezGene: | DSC2 |
HGNC: | 3036 |
UniProt: | Q02487 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 5.29e-22 | 14 |
acinar cell | 4.02e-21 | 5 |
protein secreting cell | 1.48e-17 | 6 |
acinar cell of salivary gland | 3.12e-13 | 3 |
endo-epithelial cell | 3.26e-13 | 42 |
gingival epithelial cell | 8.35e-13 | 3 |
epithelial cell of Malassez | 3.13e-12 | 3 |
glandular epithelial cell | 1.32e-11 | 9 |
ecto-epithelial cell | 4.55e-10 | 34 |
sebum secreting cell | 1.24e-09 | 2 |
epithelial cell of sweat gland | 1.24e-09 | 2 |
epithelial cell of skin gland | 1.24e-09 | 2 |
acinar cell of sebaceous gland | 1.24e-09 | 2 |
corneal epithelial cell | 2.06e-09 | 2 |
epithelial cell of alimentary canal | 3.92e-09 | 20 |
endodermal cell | 8.19e-09 | 58 |
epidermal cell | 1.41e-07 | 9 |