FFCP PHASE1:Hg19::chr15:65670360..65670378,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9543 | |EntrezGene=9543 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9700 | |HGNC=9700 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVU1,E7ESE1 | |UniProt=Q8IVU1,E7ESE1 | ||
|association_with_transcript=0bp_to_ENST00000327987,ENST00000443278,NM_004884,uc002aos.2_5end | |association_with_transcript=0bp_to_ENST00000327987,ENST00000443278,NM_004884,uc002aos.2_5end | ||
|cluster_id=chr15:65670360..65670378,- | |||
|coexpression_cluster_id=C258 | |coexpression_cluster_id=C258 | ||
|description=CAGE_peak_2_at_IGDCC3_5end | |description=CAGE_peak_2_at_IGDCC3_5end | ||
|id=chr15:65670360..65670378,- | |id=chr15:65670360..65670378,- | ||
|ontology_enrichment_celltype=CL:0002319!4.13e-13!25;CL:0000047!5.90e-12!8;CL:0000039!1.74e-10!7;CL:0000586!1.74e-10!7;CL:0000133!3.35e-10!59;CL:0000540!8.42e-10!6;CL:0000031!8.42e-10!6;CL:0000404!8.42e-10!6;CL:0002322!3.93e-09!5;CL:0000221!2.55e-07!71;CL:0002563!9.44e-07!4 | |ontology_enrichment_celltype=CL:0002319!4.13e-13!25;CL:0000047!5.90e-12!8;CL:0000039!1.74e-10!7;CL:0000586!1.74e-10!7;CL:0000133!3.35e-10!59;CL:0000540!8.42e-10!6;CL:0000031!8.42e-10!6;CL:0000404!8.42e-10!6;CL:0002322!3.93e-09!5;CL:0000221!2.55e-07!71;CL:0002563!9.44e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.33e-25;5!CL:0000540;5.29e-20;6!CL:0000404;5.29e-20;6!CL:0000039;4.13e-17;7!CL:0000586;4.13e-17;7!CL:0002319;1.15e-12;25!CL:0002321;2.69e-11;15!CL:0002563;2.85e-11;4!CL:0002253;1.77e-10;2!CL:0000182;4.09e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.60e-25,5;CL:0000047,9.42e-21,8;CL:0000540,9.81e-20,6;CL:0000031,9.81e-20,6;CL:0000404,9.81e-20,6;CL:0000039,5.42e-17,7;CL:0000586,5.42e-17,7;CL:0002319,1.41e-12,25;CL:0002563,2.71e-11,4;CL:0002253,1.86e-10,2;CL:0000133,1.88e-10,59;CL:0000221,3.71e-08,72;CL:0000182,4.09e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000031;5.29e-20;6!UBERON:0009117;5.09e-12;10!UBERON:0005564;5.09e-12;10!UBERON:0004161;9.19e-08;11!UBERON:0003104;4.89e-07;31!UBERON:0006238;5.55e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!1.18e-10!22;DOID:2994!1.18e-10!22 | |ontology_enrichment_disease=DOID:3095!1.18e-10!22;DOID:2994!1.18e-10!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;8.44e-13;22!DOID:2994;8.44e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,9.40e-13,22;DOID:2994,9.40e-13,22;DOID:305,3.89e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.37e-41!82;UBERON:0000073!8.60e-40!94;UBERON:0001016!8.60e-40!94;UBERON:0005743!8.02e-39!86;UBERON:0001049!2.10e-31!57;UBERON:0005068!2.10e-31!57;UBERON:0006241!2.10e-31!57;UBERON:0007135!2.10e-31!57;UBERON:0000955!2.03e-29!69;UBERON:0006238!2.03e-29!69;UBERON:0002780!1.35e-26!41;UBERON:0001890!1.35e-26!41;UBERON:0006240!1.35e-26!41;UBERON:0002616!2.07e-26!59;UBERON:0003080!9.95e-26!42;UBERON:0001893!3.29e-25!34;UBERON:0002020!4.98e-25!34;UBERON:0003528!4.98e-25!34;UBERON:0003075!1.37e-24!86;UBERON:0007284!1.37e-24!86;UBERON:0002791!3.17e-24!33;UBERON:0001869!4.46e-23!32;UBERON:0002346!7.75e-23!90;UBERON:0004121!1.01e-21!169;UBERON:0000924!9.36e-21!173;UBERON:0006601!9.36e-21!173;UBERON:0000956!3.81e-20!25;UBERON:0000203!3.81e-20!25;UBERON:0003056!7.92e-20!61;UBERON:0002619!2.60e-17!22;UBERON:0001950!3.15e-17!20;UBERON:0000153!1.22e-15!129;UBERON:0007811!1.22e-15!129;UBERON:0000033!1.49e-14!123;UBERON:0007023!1.53e-12!115;UBERON:0001871!1.30e-07!7;UBERON:0002021!1.67e-07!5;UBERON:0003350!1.72e-07!5;UBERON:0000064!3.82e-07!219;UBERON:0003076!5.34e-07!15;UBERON:0003057!5.34e-07!15;UBERON:0001242!9.44e-07!4;UBERON:0001262!9.44e-07!4;UBERON:0004786!9.44e-07!4;UBERON:0004808!9.44e-07!4;UBERON:0001277!9.44e-07!4 | |ontology_enrichment_uberon=UBERON:0001017!1.37e-41!82;UBERON:0000073!8.60e-40!94;UBERON:0001016!8.60e-40!94;UBERON:0005743!8.02e-39!86;UBERON:0001049!2.10e-31!57;UBERON:0005068!2.10e-31!57;UBERON:0006241!2.10e-31!57;UBERON:0007135!2.10e-31!57;UBERON:0000955!2.03e-29!69;UBERON:0006238!2.03e-29!69;UBERON:0002780!1.35e-26!41;UBERON:0001890!1.35e-26!41;UBERON:0006240!1.35e-26!41;UBERON:0002616!2.07e-26!59;UBERON:0003080!9.95e-26!42;UBERON:0001893!3.29e-25!34;UBERON:0002020!4.98e-25!34;UBERON:0003528!4.98e-25!34;UBERON:0003075!1.37e-24!86;UBERON:0007284!1.37e-24!86;UBERON:0002791!3.17e-24!33;UBERON:0001869!4.46e-23!32;UBERON:0002346!7.75e-23!90;UBERON:0004121!1.01e-21!169;UBERON:0000924!9.36e-21!173;UBERON:0006601!9.36e-21!173;UBERON:0000956!3.81e-20!25;UBERON:0000203!3.81e-20!25;UBERON:0003056!7.92e-20!61;UBERON:0002619!2.60e-17!22;UBERON:0001950!3.15e-17!20;UBERON:0000153!1.22e-15!129;UBERON:0007811!1.22e-15!129;UBERON:0000033!1.49e-14!123;UBERON:0007023!1.53e-12!115;UBERON:0001871!1.30e-07!7;UBERON:0002021!1.67e-07!5;UBERON:0003350!1.72e-07!5;UBERON:0000064!3.82e-07!219;UBERON:0003076!5.34e-07!15;UBERON:0003057!5.34e-07!15;UBERON:0001242!9.44e-07!4;UBERON:0001262!9.44e-07!4;UBERON:0004786!9.44e-07!4;UBERON:0004808!9.44e-07!4;UBERON:0001277!9.44e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;2.85e-11;4!UBERON:0001262;2.85e-11;4!UBERON:0004786;2.85e-11;4!UBERON:0004808;2.85e-11;4!UBERON:0001277;2.85e-11;4!UBERON:0000922;4.70e-11;49!UBERON:0000473;6.75e-10;8!UBERON:0003135;3.25e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.71e-11,4;UBERON:0001262,2.71e-11,4;UBERON:0004786,2.71e-11,4;UBERON:0004808,2.71e-11,4;UBERON:0001277,2.71e-11,4;UBERON:0000473,7.16e-10,8;UBERON:0001016,2.79e-08,89;UBERON:0001017,3.34e-08,81;UBERON:0011216,1.13e-07,223;UBERON:0003135,3.39e-07,11 | |||
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| ||
|short_description=p2@IGDCC3 | |short_description=p2@IGDCC3 | ||
}} | }} |
Latest revision as of 15:05, 18 September 2015
Short description: | p2@IGDCC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IGDCC3_5end |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | 0bp_to_ENST00000327987, ENST00000443278, NM_004884, uc002aos.2_5end |
EntrezGene: | IGDCC3 |
HGNC: | 9700 |
UniProt: | Q8IVU1E7ESE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.60e-25 | 5 |
neuronal stem cell | 9.42e-21 | 8 |
neuron | 9.81e-20 | 6 |
neuroblast | 9.81e-20 | 6 |
electrically signaling cell | 9.81e-20 | 6 |
germ line cell | 5.42e-17 | 7 |
germ cell | 5.42e-17 | 7 |
neural cell | 1.41e-12 | 25 |
intestinal epithelial cell | 2.71e-11 | 4 |
epithelial cell of large intestine | 1.86e-10 | 2 |
neurectodermal cell | 1.88e-10 | 59 |
ectodermal cell | 3.71e-08 | 72 |
hepatocyte | 4.09e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.71e-11 | 4 |
wall of intestine | 2.71e-11 | 4 |
gastrointestinal system mucosa | 2.71e-11 | 4 |
gastrointestinal system epithelium | 2.71e-11 | 4 |
intestinal epithelium | 2.71e-11 | 4 |
testis | 7.16e-10 | 8 |
nervous system | 2.79e-08 | 89 |
central nervous system | 3.34e-08 | 81 |
organ system subdivision | 1.13e-07 | 223 |
male reproductive organ | 3.39e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 9.40e-13 | 22 |
germ cell cancer | 9.40e-13 | 22 |
carcinoma | 3.89e-07 | 106 |