FFCP PHASE1:Hg19::chr18:46477549..46477578,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:46477549..46477578,-
|short_description=p7@SMAD7
|description=CAGE_peak_7_at_SMAD7_5end
|association_with_transcript=-468bp_to_ENST00000262158,NM_00119082...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4092 | |EntrezGene=4092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6773 | |HGNC=6773 | ||
|TSSclassifier=strong | |||
|UniProt=O15105 | |UniProt=O15105 | ||
|association_with_transcript=-468bp_to_ENST00000262158,NM_001190821,NM_005904,uc002ldg.2_5end | |||
|cluster_id=chr18:46477549..46477578,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_7_at_SMAD7_5end | |||
|id=chr18:46477549..46477578,- | |||
|ontology_enrichment_celltype=CL:0000791!8.17e-07!18;CL:0000789!8.17e-07!18;CL:0002420!8.17e-07!18;CL:0002419!8.17e-07!18;CL:0000790!8.17e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000623;6.19e-41;3!CL:0000767;9.75e-40;3!CL:0000094;2.31e-15;8!CL:0000791;3.00e-12;18!CL:0000789;3.00e-12;18!CL:0002419;3.00e-12;18!CL:0000625;1.01e-11;11!CL:0000081;2.43e-11;11!CL:0002393;1.06e-09;6!CL:0002397;1.06e-09;6!CL:0000084;6.92e-09;25!CL:0000542;6.77e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,6.64e-41,3;CL:0000825,6.64e-41,3;CL:0000767,5.72e-40,3;CL:0000094,1.90e-15,8;CL:0000738,1.26e-12,136;CL:0000791,2.63e-12,18;CL:0000789,2.63e-12,18;CL:0002420,2.63e-12,18;CL:0002419,2.63e-12,18;CL:0000790,2.63e-12,18;CL:0000838,3.48e-12,52;CL:0000542,6.05e-12,53;CL:0000051,6.05e-12,53;CL:0000625,9.88e-12,11;CL:0000081,2.10e-11,11;CL:0002032,1.87e-10,161;CL:0000837,1.87e-10,161;CL:0000037,5.83e-10,168;CL:0000988,2.21e-09,177;CL:0000084,6.31e-09,25;CL:0000827,6.31e-09,25;CL:0002087,2.25e-08,115;CL:0002031,5.50e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.00e-12;18!CL:0000051;6.77e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,1.18009283054671,1.53531759238885,1.23852898652861,0,0,0,0,0,0,1.10799081706375,1.00272223735071,0.651032612147555,0,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0.75374599577023,0.521482918420201,0.65156653411535,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,1.32171328579026,0.560508562981536,0,0.393419540227666,1.96505381374582,0.205601498999509,0,0.977766799900771,0.473447805734733,0,0,0.589211814949674,0.443067789167242,0.270803863765016,0,0.130059347559878,0,0,0,0,0.267540828089713,1.04535523804977,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,3.42731463482045,4.27904313253612,3.47578569318718,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0.257640540045629,0,1.0126579934476,0.194874010322397,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0.336255431980582,2.1673383622212,4.09692392233083,2.43851768931522,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0.368738337083406,0,0,0,0.413536052245775,0.431428401637234,0.426910231213777,0,0,0,0,0.61384789315225,0.561320188866147,0.256278298511402,0,0.64341568457443,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0.398495976502139,0,0.251932747854276,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0.19351266257817,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.319267718114302,0,0.252071696221718,0,0,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0.131545547125698,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.473314686579554,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,1.18009283054671,1.53531759238885,1.23852898652861,0,0,0,0,0,0,1.10799081706375,1.00272223735071,0.651032612147555,0,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0.75374599577023,0.521482918420201,0.65156653411535,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,1.32171328579026,0.560508562981536,0,0.393419540227666,1.96505381374582,0.205601498999509,0,0.977766799900771,0.473447805734733,0,0,0.589211814949674,0.443067789167242,0.270803863765016,0,0.130059347559878,0,0,0,0,0.267540828089713,1.04535523804977,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,3.42731463482045,4.27904313253612,3.47578569318718,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0.257640540045629,0,1.0126579934476,0.194874010322397,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0.336255431980582,2.1673383622212,4.09692392233083,2.43851768931522,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0.368738337083406,0,0,0,0.413536052245775,0.431428401637234,0.426910231213777,0,0,0,0,0.61384789315225,0.561320188866147,0.256278298511402,0,0.64341568457443,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0.398495976502139,0,0.251932747854276,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0.19351266257817,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.319267718114302,0,0.252071696221718,0,0,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0.131545547125698,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0.955538938977433,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.473314686579554,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@SMAD7 | |||
}} | }} |
Latest revision as of 17:02, 19 September 2015
Short description: | p7@SMAD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SMAD7_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -468bp_to_ENST00000262158, NM_001190821, NM_005904, uc002ldg.2_5end |
EntrezGene: | SMAD7 |
HGNC: | 6773 |
UniProt: | O15105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 6.64e-41 | 3 |
pro-NK cell | 6.64e-41 | 3 |
basophil | 5.72e-40 | 3 |
granulocyte | 1.90e-15 | 8 |
leukocyte | 1.26e-12 | 136 |
mature alpha-beta T cell | 2.63e-12 | 18 |
alpha-beta T cell | 2.63e-12 | 18 |
immature T cell | 2.63e-12 | 18 |
mature T cell | 2.63e-12 | 18 |
immature alpha-beta T cell | 2.63e-12 | 18 |
lymphoid lineage restricted progenitor cell | 3.48e-12 | 52 |
lymphocyte | 6.05e-12 | 53 |
common lymphoid progenitor | 6.05e-12 | 53 |
CD8-positive, alpha-beta T cell | 9.88e-12 | 11 |
blood cell | 2.10e-11 | 11 |
hematopoietic oligopotent progenitor cell | 1.87e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-10 | 161 |
hematopoietic stem cell | 5.83e-10 | 168 |
hematopoietic cell | 2.21e-09 | 177 |
T cell | 6.31e-09 | 25 |
pro-T cell | 6.31e-09 | 25 |
nongranular leukocyte | 2.25e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 5.50e-08 | 120 |