FFCP PHASE1:Hg19::chr17:38632800..38632814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38632800..38632814,- | |||
|coexpression_cluster_id=C918 | |coexpression_cluster_id=C918 | ||
|description=CAGE_peak_at_chr17:38632800..38632814,- | |description=CAGE_peak_at_chr17:38632800..38632814,- | ||
|id=chr17:38632800..38632814,- | |id=chr17:38632800..38632814,- | ||
|ontology_enrichment_celltype=CL:0000066!3.53e-27!254;CL:0002076!8.97e-25!43;CL:0000223!6.29e-20!59;CL:0002251!3.14e-14!21;CL:0002159!4.53e-11!13;CL:0002368!6.07e-11!13;CL:0000622!8.76e-11!5;CL:0000154!7.17e-09!6;CL:0000244!2.34e-08!4;CL:0000731!2.34e-08!4;CL:0002623!3.60e-07!3 | |ontology_enrichment_celltype=CL:0000066!3.53e-27!254;CL:0002076!8.97e-25!43;CL:0000223!6.29e-20!59;CL:0002251!3.14e-14!21;CL:0002159!4.53e-11!13;CL:0002368!6.07e-11!13;CL:0000622!8.76e-11!5;CL:0000154!7.17e-09!6;CL:0000244!2.34e-08!4;CL:0000731!2.34e-08!4;CL:0002623!3.60e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000622;2.68e-30;5!CL:0000154;3.14e-25;6!CL:0002076;2.35e-20;42!CL:0002623;5.94e-19;3!CL:0000150;9.12e-17;9!CL:0000362;1.19e-16;9!CL:0000240;3.69e-16;6!CL:0000311;3.69e-16;6!CL:0000079;3.69e-16;6!CL:0000237;3.69e-16;6!CL:0002159;6.32e-15;14!CL:0002251;6.53e-14;20!CL:0000317;3.89e-13;2!CL:1000448;3.89e-13;2!CL:0002308;3.89e-13;2!CL:0002140;3.89e-13;2!CL:0000312;1.85e-11;5!CL:0002368;2.64e-11;13!CL:0002231;6.32e-09;3!CL:0000307;6.32e-09;3!CL:0002252;1.63e-07;1!CL:0002336;4.08e-07;1!CL:0002261;4.08e-07;1!CL:0002170;4.08e-07;1!CL:0000244;5.76e-07;4!CL:0000731;5.76e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,4.93e-30,5;CL:0000154,5.20e-25,6;CL:0002076,5.43e-25,42;CL:0002623,7.15e-19,3;CL:0000223,2.65e-17,58;CL:0000150,1.27e-16,9;CL:0000362,1.94e-16,9;CL:0000240,5.27e-16,6;CL:0000311,5.27e-16,6;CL:0000079,5.27e-16,6;CL:0000237,5.27e-16,6;CL:0000036,5.27e-16,6;CL:0000357,5.27e-16,6;CL:0000114,5.27e-16,6;CL:0002159,8.96e-15,14;CL:0000066,3.44e-14,253;CL:0002251,6.17e-14,20;CL:0000317,5.95e-13,2;CL:1000448,5.95e-13,2;CL:0002308,5.95e-13,2;CL:0002140,5.95e-13,2;CL:0002368,2.39e-11,13;CL:0000312,2.46e-11,5;CL:0000068,8.36e-09,3;CL:0000069,8.36e-09,3;CL:0002231,8.36e-09,3;CL:0000307,8.36e-09,3;CL:0000377,8.36e-09,3;CL:0002252,1.44e-07,1;CL:0002336,4.34e-07,1;CL:0002261,4.34e-07,1;CL:0002170,4.34e-07,1;CL:0000244,5.69e-07,4;CL:0000731,5.69e-07,4;CL:0002321,7.72e-07,250;CL:0002327,8.10e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000357;3.69e-16;6!CL:0000114;3.69e-16;6!CL:0000223;9.57e-11;58!CL:0000377;6.32e-09;3!UBERON:0005754;4.08e-07;1!UBERON:0004874;4.08e-07;1 | |||
|ontology_enrichment_disease=DOID:305!4.44e-13!106;DOID:0050687!3.05e-07!143;DOID:1749!5.87e-07!14 | |ontology_enrichment_disease=DOID:305!4.44e-13!106;DOID:0050687!3.05e-07!143;DOID:1749!5.87e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3111;4.08e-07;1!DOID:3603;4.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,7.40e-07,1;DOID:3603,7.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.14e-24!169;UBERON:0000925!9.14e-24!169;UBERON:0006595!9.14e-24!169;UBERON:0001004!2.76e-20!72;UBERON:0001007!2.24e-15!155;UBERON:0001555!2.24e-15!155;UBERON:0007026!2.24e-15!155;UBERON:0000077!6.47e-15!130;UBERON:0000065!8.66e-15!53;UBERON:0005631!3.27e-14!14;UBERON:0000158!3.27e-14!14;UBERON:0001041!2.34e-12!98;UBERON:0000161!4.48e-12!35;UBERON:0000072!7.72e-12!46;UBERON:0004921!2.20e-11!129;UBERON:0004185!2.20e-11!129;UBERON:0001737!1.48e-10!9;UBERON:0008947!4.49e-10!38;UBERON:0003258!4.49e-10!38;UBERON:0000166!4.82e-10!21;UBERON:0000365!8.86e-10!5;UBERON:0005911!1.00e-09!82;UBERON:0001557!1.42e-09!19;UBERON:0003124!3.95e-09!7;UBERON:0003102!2.23e-08!95;UBERON:0000165!3.31e-08!28;UBERON:0000930!3.31e-08!28;UBERON:0005910!4.74e-08!6;UBERON:0005153!2.46e-07!37;UBERON:0000478!3.66e-07!24;UBERON:0000062!4.09e-07!511;UBERON:0002530!5.56e-07!59;UBERON:0000305!8.42e-07!7 | |ontology_enrichment_uberon=UBERON:0004119!9.14e-24!169;UBERON:0000925!9.14e-24!169;UBERON:0006595!9.14e-24!169;UBERON:0001004!2.76e-20!72;UBERON:0001007!2.24e-15!155;UBERON:0001555!2.24e-15!155;UBERON:0007026!2.24e-15!155;UBERON:0000077!6.47e-15!130;UBERON:0000065!8.66e-15!53;UBERON:0005631!3.27e-14!14;UBERON:0000158!3.27e-14!14;UBERON:0001041!2.34e-12!98;UBERON:0000161!4.48e-12!35;UBERON:0000072!7.72e-12!46;UBERON:0004921!2.20e-11!129;UBERON:0004185!2.20e-11!129;UBERON:0001737!1.48e-10!9;UBERON:0008947!4.49e-10!38;UBERON:0003258!4.49e-10!38;UBERON:0000166!4.82e-10!21;UBERON:0000365!8.86e-10!5;UBERON:0005911!1.00e-09!82;UBERON:0001557!1.42e-09!19;UBERON:0003124!3.95e-09!7;UBERON:0003102!2.23e-08!95;UBERON:0000165!3.31e-08!28;UBERON:0000930!3.31e-08!28;UBERON:0005910!4.74e-08!6;UBERON:0005153!2.46e-07!37;UBERON:0000478!3.66e-07!24;UBERON:0000062!4.09e-07!511;UBERON:0002530!5.56e-07!59;UBERON:0000305!8.42e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;3.89e-13;2!UBERON:0007771;3.89e-13;2!UBERON:0003297;3.89e-13;2!UBERON:0001821;3.89e-13;2!UBERON:0003487;3.89e-13;2!UBERON:0001820;3.89e-13;2!UBERON:0001003;6.66e-10;15!UBERON:0007376;6.66e-10;15!UBERON:0001044;9.90e-10;6!UBERON:0003293;9.90e-10;6!UBERON:0003294;9.90e-10;6!UBERON:0010047;9.90e-10;6!UBERON:0003408;9.90e-10;6!UBERON:0000167;9.90e-10;6!UBERON:0002365;1.74e-08;31!UBERON:0002330;1.74e-08;31!UBERON:0000161;9.06e-08;19!UBERON:0000166;9.06e-08;19!UBERON:0000165;3.49e-07;28!UBERON:0001041;3.78e-07;14!UBERON:0000989;4.08e-07;1!UBERON:0000998;4.08e-07;1!UBERON:0008811;4.08e-07;1!UBERON:0006868;4.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.95e-13,2;UBERON:0007771,5.95e-13,2;UBERON:0003297,5.95e-13,2;UBERON:0001821,5.95e-13,2;UBERON:0003487,5.95e-13,2;UBERON:0001820,5.95e-13,2;UBERON:0005089,5.95e-13,2;UBERON:0005088,5.95e-13,2;UBERON:0001003,8.87e-10,15;UBERON:0007376,8.87e-10,15;UBERON:0007383,8.87e-10,15;UBERON:0001044,1.08e-09,6;UBERON:0003293,1.08e-09,6;UBERON:0003294,1.08e-09,6;UBERON:0010047,1.08e-09,6;UBERON:0000167,1.08e-09,6;UBERON:0003102,6.59e-09,99;UBERON:0002365,1.30e-08,31;UBERON:0002330,1.30e-08,31;UBERON:0002530,2.74e-08,59;UBERON:0000161,2.60e-07,36;UBERON:0000989,3.62e-07,1;UBERON:0008811,3.62e-07,1;UBERON:0006258,3.62e-07,1;UBERON:0005876,3.62e-07,1;UBERON:0004874,3.62e-07,1;UBERON:0000998,4.60e-07,1;UBERON:0006868,4.60e-07,1;UBERON:0000165,6.40e-07,29;UBERON:0000930,6.40e-07,29;UBERON:0001911,8.10e-07,4;UBERON:0005333,8.10e-07,4;UBERON:0008425,8.10e-07,4;UBERON:0005311,8.10e-07,4 | |||
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| ||
|short_description=p@chr17:38632800..38632814,- | |short_description=p@chr17:38632800..38632814,- | ||
}} | }} |
Latest revision as of 16:30, 25 July 2015
Short description: | p@chr17:38632800..38632814, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38632800..38632814, - |
Coexpression cluster: | C918_Keratinocyte_Mammary_Prostate_Urothelial_salivary_Corneal_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 5.95e-13 | 2 |
epidermis gland | 5.95e-13 | 2 |
gland of integumental system | 5.95e-13 | 2 |
sebaceous gland | 5.95e-13 | 2 |
skin sebaceous gland | 5.95e-13 | 2 |
sweat gland | 5.95e-13 | 2 |
sweat gland placode | 5.95e-13 | 2 |
sebaceous gland placode | 5.95e-13 | 2 |
skin epidermis | 8.87e-10 | 15 |
outer epithelium | 8.87e-10 | 15 |
enveloping layer of ectoderm | 8.87e-10 | 15 |
saliva-secreting gland | 1.08e-09 | 6 |
gland of oral region | 1.08e-09 | 6 |
gland of foregut | 1.08e-09 | 6 |
oral gland | 1.08e-09 | 6 |
oral cavity | 1.08e-09 | 6 |
surface structure | 6.59e-09 | 99 |
exocrine gland | 1.30e-08 | 31 |
exocrine system | 1.30e-08 | 31 |
gland | 2.74e-08 | 59 |
orifice | 2.60e-07 | 36 |
penis | 3.62e-07 | 1 |
intromittent organ | 3.62e-07 | 1 |
lateral plate mesenchyme | 3.62e-07 | 1 |
undifferentiated genital tubercle | 3.62e-07 | 1 |
somatopleure | 3.62e-07 | 1 |
seminal vesicle | 4.60e-07 | 1 |
seminal fluid secreting gland | 4.60e-07 | 1 |
mouth | 6.40e-07 | 29 |
stomodeum | 6.40e-07 | 29 |
mammary gland | 8.10e-07 | 4 |
mammary bud | 8.10e-07 | 4 |
mammary ridge | 8.10e-07 | 4 |
mammary placode | 8.10e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 7.40e-07 | 1 |
mucinous cystadenocarcinoma | 7.40e-07 | 1 |