FFCP PHASE1:Hg19::chr17:4623333..4623376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:4623333..4623376,+ | |||
|coexpression_cluster_id=C161 | |coexpression_cluster_id=C161 | ||
|description=CAGE_peak_at_chr17:4623333..4623376,+ | |description=CAGE_peak_at_chr17:4623333..4623376,+ | ||
|id=chr17:4623333..4623376,+ | |id=chr17:4623333..4623376,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002097;3.56e-08;2!CL:0000077;5.75e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,3.56e-08,2;CL:0000066,2.49e-07,253;CL:0000077,5.41e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.01e-35;29 | |||
|ontology_enrichment_disease=DOID:305!9.88e-11!106;DOID:114!9.24e-10!2;DOID:0050687!1.19e-07!143 | |ontology_enrichment_disease=DOID:305!9.88e-11!106;DOID:114!9.24e-10!2;DOID:0050687!1.19e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:114;4.09e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.34e-14,106;DOID:0050687,6.75e-10,143;DOID:114,4.09e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.70e-37!9;UBERON:0001557!2.15e-20!19;UBERON:0008947!1.75e-13!38;UBERON:0003258!1.75e-13!38;UBERON:0000072!1.26e-10!46;UBERON:0000065!1.74e-10!53;UBERON:0001004!3.05e-08!72;UBERON:0001041!3.38e-08!98;UBERON:0004921!5.67e-07!129;UBERON:0004185!5.67e-07!129 | |ontology_enrichment_uberon=UBERON:0001737!2.70e-37!9;UBERON:0001557!2.15e-20!19;UBERON:0008947!1.75e-13!38;UBERON:0003258!1.75e-13!38;UBERON:0000072!1.26e-10!46;UBERON:0000065!1.74e-10!53;UBERON:0001004!3.05e-08!72;UBERON:0001041!3.38e-08!98;UBERON:0004921!5.67e-07!129;UBERON:0004185!5.67e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.07e-92;9!UBERON:0001557;9.07e-92;9!UBERON:0000072;2.77e-25;37!UBERON:0000065;3.86e-20;44!UBERON:0001004;4.89e-11;65!UBERON:0001905;5.01e-08;2!UBERON:0002757;5.01e-08;2!UBERON:0010134;5.01e-08;2!UBERON:0005408;5.01e-08;2!UBERON:0001899;5.01e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.46e-91,9;UBERON:0001557,3.86e-43,19;UBERON:0008947,5.06e-27,38;UBERON:0003258,5.06e-27,38;UBERON:0000072,1.09e-21,47;UBERON:0000065,9.11e-19,54;UBERON:0001004,1.89e-13,74;UBERON:0001041,2.68e-11,87;UBERON:0001905,5.37e-08,2;UBERON:0002757,5.37e-08,2;UBERON:0010134,5.37e-08,2;UBERON:0005408,5.37e-08,2;UBERON:0001899,5.37e-08,2;UBERON:0004921,5.41e-08,118 | |||
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| ||
|short_description=p@chr17:4623333..4623376,+ | |short_description=p@chr17:4623333..4623376,+ | ||
}} | }} |
Latest revision as of 18:03, 25 July 2015
Short description: | p@chr17:4623333..4623376, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4623333..4623376, + |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 3.56e-08 | 2 |
epithelial cell | 2.49e-07 | 253 |
mesothelial cell | 5.41e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.46e-91 | 9 |
upper respiratory tract | 3.86e-43 | 19 |
respiratory primordium | 5.06e-27 | 38 |
endoderm of foregut | 5.06e-27 | 38 |
segment of respiratory tract | 1.09e-21 | 47 |
respiratory tract | 9.11e-19 | 54 |
respiratory system | 1.89e-13 | 74 |
foregut | 2.68e-11 | 87 |
pineal body | 5.37e-08 | 2 |
regional part of epithalamus | 5.37e-08 | 2 |
secretory circumventricular organ | 5.37e-08 | 2 |
circumventricular organ | 5.37e-08 | 2 |
epithalamus | 5.37e-08 | 2 |
subdivision of digestive tract | 5.41e-08 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.34e-14 | 106 |
cell type cancer | 6.75e-10 | 143 |
heart disease | 4.09e-08 | 2 |