FFCP PHASE1:Hg19::chr17:79974342..79974365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79974342..79974365,+ | |||
|coexpression_cluster_id=C127 | |coexpression_cluster_id=C127 | ||
|description=CAGE_peak_at_chr17:79974342..79974365,+ | |description=CAGE_peak_at_chr17:79974342..79974365,+ | ||
|id=chr17:79974342..79974365,+ | |id=chr17:79974342..79974365,+ | ||
|ontology_enrichment_celltype=CL:0000039!5.76e-10!7;CL:0000586!5.76e-10!7 | |ontology_enrichment_celltype=CL:0000039!5.76e-10!7;CL:0000586!5.76e-10!7 | ||
|ontology_enrichment_celltype_v019=CL:0002253;6.30e-21;2!CL:0002563;3.60e-11;4!CL:0000039;6.21e-07;7!CL:0000586;6.21e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,6.96e-21,2;CL:0002563,3.79e-11,4;CL:0000039,6.04e-07,7;CL:0000586,6.04e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;6.62e-41;1!DOID:1357;6.62e-41;1!DOID:3119;2.59e-12;14!DOID:5409;2.80e-11;4!DOID:0050615;5.28e-11;16!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.62e-41,1;DOID:1357,6.62e-41,1;DOID:3119,2.66e-12,14;DOID:5409,2.80e-11,4;DOID:0050615,5.28e-11,16;DOID:0050686,8.63e-08,137;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.83e-13!8;UBERON:0003135!3.01e-09!11;UBERON:0003101!2.92e-08!22;UBERON:0000079!2.92e-08!22 | |ontology_enrichment_uberon=UBERON:0000473!7.83e-13!8;UBERON:0003135!3.01e-09!11;UBERON:0003101!2.92e-08!22;UBERON:0000079!2.92e-08!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;6.62e-41;1!UBERON:0001825;6.62e-41;1!UBERON:0001052;3.60e-11;4!UBERON:0001242;3.60e-11;4!UBERON:0001262;3.60e-11;4!UBERON:0004786;3.60e-11;4!UBERON:0004808;3.60e-11;4!UBERON:0001277;3.60e-11;4!UBERON:0004907;3.35e-09;5!UBERON:0000485;6.21e-07;7!UBERON:0003929;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.62e-41,1;UBERON:0001825,6.62e-41,1;UBERON:0001052,3.79e-11,4;UBERON:0001242,3.79e-11,4;UBERON:0001262,3.79e-11,4;UBERON:0004786,3.79e-11,4;UBERON:0004808,3.79e-11,4;UBERON:0001277,3.79e-11,4;UBERON:0004907,3.49e-09,5 | |||
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| ||
|short_description=p@chr17:79974342..79974365,+ | |short_description=p@chr17:79974342..79974365,+ | ||
}} | }} |
Latest revision as of 22:58, 25 July 2015
Short description: | p@chr17:79974342..79974365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79974342..79974365, + |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 6.96e-21 | 2 |
intestinal epithelial cell | 3.79e-11 | 4 |
germ line cell | 6.04e-07 | 7 |
germ cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 6.62e-41 | 1 |
paranasal sinus | 6.62e-41 | 1 |
rectum | 3.79e-11 | 4 |
intestinal mucosa | 3.79e-11 | 4 |
wall of intestine | 3.79e-11 | 4 |
gastrointestinal system mucosa | 3.79e-11 | 4 |
gastrointestinal system epithelium | 3.79e-11 | 4 |
intestinal epithelium | 3.79e-11 | 4 |
lower digestive tract | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.62e-41 | 1 |
maxillary sinus cancer | 6.62e-41 | 1 |
gastrointestinal system cancer | 2.66e-12 | 14 |
lung small cell carcinoma | 2.80e-11 | 4 |
respiratory system cancer | 5.28e-11 | 16 |
organ system cancer | 8.63e-08 | 137 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |