FFCP PHASE1:Hg19::chr17:80278355..80278368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:80278355..80278368,+ | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_at_chr17:80278355..80278368,+ | |description=CAGE_peak_at_chr17:80278355..80278368,+ | ||
|id=chr17:80278355..80278368,+ | |id=chr17:80278355..80278368,+ | ||
|ontology_enrichment_celltype=CL:1000415!2.37e-16!2;CL:0002149!3.67e-12!6;CL:0002255!3.67e-12!6;CL:0000223!2.22e-09!59;CL:0000313!9.17e-09!1;CL:0002563!9.56e-09!4 | |ontology_enrichment_celltype=CL:1000415!2.37e-16!2;CL:0002149!3.67e-12!6;CL:0002255!3.67e-12!6;CL:0000223!2.22e-09!59;CL:0000313!9.17e-09!1;CL:0002563!9.56e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.59e-25;12!CL:1000415;1.17e-17;2!CL:0002563;1.27e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12;CL:1000415,1.07e-17,2;CL:0000223,1.02e-09,58;CL:0002563,1.12e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.31e-28;11!UBERON:0009497;1.24e-23;13!UBERON:0001041;1.04e-10;30!UBERON:0003104;3.55e-10;31!CL:0000223;4.32e-07;58 | |||
|ontology_enrichment_disease=DOID:3001!3.67e-12!6;DOID:0050687!8.09e-11!143;DOID:305!6.25e-10!106;DOID:2152!9.17e-09!1;DOID:299!1.87e-07!25 | |ontology_enrichment_disease=DOID:3001!3.67e-12!6;DOID:0050687!8.09e-11!143;DOID:305!6.25e-10!106;DOID:2152!9.17e-09!1;DOID:299!1.87e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:7;8.63e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.18e-08,39;DOID:305,3.25e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002110!3.25e-11!3;UBERON:0006242!3.25e-11!3;UBERON:0000160!1.74e-09!27;UBERON:0004911!9.17e-09!1;UBERON:0001242!9.56e-09!4;UBERON:0001262!9.56e-09!4;UBERON:0004786!9.56e-09!4;UBERON:0004808!9.56e-09!4;UBERON:0001277!9.56e-09!4;UBERON:0001052!1.70e-08!4;UBERON:0003929!3.33e-08!54;UBERON:0009497!9.35e-08!25;UBERON:0000015!9.35e-08!25;UBERON:0002423!9.35e-08!25;UBERON:0006235!9.35e-08!25;UBERON:0004161!9.35e-08!25;UBERON:0005409!2.90e-07!35;UBERON:0003350!3.68e-07!5;UBERON:0004907!5.82e-07!5 | |ontology_enrichment_uberon=UBERON:0002110!3.25e-11!3;UBERON:0006242!3.25e-11!3;UBERON:0000160!1.74e-09!27;UBERON:0004911!9.17e-09!1;UBERON:0001242!9.56e-09!4;UBERON:0001262!9.56e-09!4;UBERON:0004786!9.56e-09!4;UBERON:0004808!9.56e-09!4;UBERON:0001277!9.56e-09!4;UBERON:0001052!1.70e-08!4;UBERON:0003929!3.33e-08!54;UBERON:0009497!9.35e-08!25;UBERON:0000015!9.35e-08!25;UBERON:0002423!9.35e-08!25;UBERON:0006235!9.35e-08!25;UBERON:0004161!9.35e-08!25;UBERON:0005409!2.90e-07!35;UBERON:0003350!3.68e-07!5;UBERON:0004907!5.82e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.15e-21;25!UBERON:0002107;1.89e-16;19!UBERON:0006925;1.89e-16;19!UBERON:0002110;3.06e-12;3!UBERON:0002365;1.21e-09;31!UBERON:0002330;1.21e-09;31!UBERON:0001242;1.27e-09;4!UBERON:0001262;1.27e-09;4!UBERON:0004786;1.27e-09;4!UBERON:0004808;1.27e-09;4!UBERON:0001277;1.27e-09;4!UBERON:0002368;4.13e-09;33!UBERON:0000949;3.43e-07;43!UBERON:0002417;9.48e-07;58!UBERON:0000916;9.48e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.21e-21,25;UBERON:0000015,1.21e-21,25;UBERON:0002423,1.21e-21,25;UBERON:0006235,1.21e-21,25;UBERON:0004161,1.21e-21,25;UBERON:0002107,2.05e-16,19;UBERON:0006925,2.05e-16,19;UBERON:0008836,2.05e-16,19;UBERON:0003929,9.10e-16,54;UBERON:0008835,2.73e-14,22;UBERON:0003894,2.73e-14,22;UBERON:0009854,1.05e-13,23;UBERON:0007499,1.13e-12,25;UBERON:0002110,2.89e-12,3;UBERON:0006242,2.89e-12,3;UBERON:0009856,3.25e-12,26;UBERON:0005911,1.51e-10,82;UBERON:0002365,2.29e-10,31;UBERON:0002330,2.29e-10,31;UBERON:0005172,2.34e-10,54;UBERON:0005173,2.34e-10,54;UBERON:0001242,1.12e-09,4;UBERON:0001262,1.12e-09,4;UBERON:0004786,1.12e-09,4;UBERON:0004808,1.12e-09,4;UBERON:0001277,1.12e-09,4;UBERON:0002417,2.25e-09,60;UBERON:0000916,2.25e-09,60;UBERON:0002368,2.89e-09,35;UBERON:0000949,2.33e-07,45 | |||
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|short_description=p@chr17:80278355..80278368,+ | |short_description=p@chr17:80278355..80278368,+ | ||
}} | }} |
Latest revision as of 23:04, 25 July 2015
Short description: | p@chr17:80278355..80278368, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80278355..80278368, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-25 | 12 |
epithelial cell of gall bladder | 1.07e-17 | 2 |
endodermal cell | 1.02e-09 | 58 |
intestinal epithelial cell | 1.12e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.21e-21 | 25 |
anatomical boundary | 1.21e-21 | 25 |
hepatobiliary system | 1.21e-21 | 25 |
foregut-midgut junction | 1.21e-21 | 25 |
septum transversum | 1.21e-21 | 25 |
liver | 2.05e-16 | 19 |
digestive gland | 2.05e-16 | 19 |
liver bud | 2.05e-16 | 19 |
gut epithelium | 9.10e-16 | 54 |
hepatic diverticulum | 2.73e-14 | 22 |
liver primordium | 2.73e-14 | 22 |
digestive tract diverticulum | 1.05e-13 | 23 |
epithelial sac | 1.13e-12 | 25 |
gallbladder | 2.89e-12 | 3 |
gall bladder primordium | 2.89e-12 | 3 |
sac | 3.25e-12 | 26 |
endo-epithelium | 1.51e-10 | 82 |
exocrine gland | 2.29e-10 | 31 |
exocrine system | 2.29e-10 | 31 |
abdomen element | 2.34e-10 | 54 |
abdominal segment element | 2.34e-10 | 54 |
intestinal mucosa | 1.12e-09 | 4 |
wall of intestine | 1.12e-09 | 4 |
gastrointestinal system mucosa | 1.12e-09 | 4 |
gastrointestinal system epithelium | 1.12e-09 | 4 |
intestinal epithelium | 1.12e-09 | 4 |
abdominal segment of trunk | 2.25e-09 | 60 |
abdomen | 2.25e-09 | 60 |
endocrine gland | 2.89e-09 | 35 |
endocrine system | 2.33e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.18e-08 | 39 |
carcinoma | 3.25e-08 | 106 |