FFCP PHASE1:Hg19::chr19:4229572..4229583,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_CU677281_5end | |association_with_transcript=25bp_to_CU677281_5end | ||
|cluster_id=chr19:4229572..4229583,+ | |||
|coexpression_cluster_id=C205 | |coexpression_cluster_id=C205 | ||
|description=CAGE_peak_2_at_CU677281_5end | |description=CAGE_peak_2_at_CU677281_5end | ||
|id=chr19:4229572..4229583,+ | |id=chr19:4229572..4229583,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.53e-11!24;CL:0000826!2.53e-11!24;CL:0002087!2.55e-09!119;CL:0000738!3.74e-09!140;CL:0002541!1.89e-08!3;CL:0000988!6.21e-08!182;CL:0002031!7.36e-08!124;CL:0000542!1.06e-07!53;CL:0000051!1.06e-07!53;CL:0002032!2.69e-07!165;CL:0000837!2.69e-07!165;CL:0000838!8.47e-07!52 | |ontology_enrichment_celltype=CL:0000945!2.53e-11!24;CL:0000826!2.53e-11!24;CL:0002087!2.55e-09!119;CL:0000738!3.74e-09!140;CL:0002541!1.89e-08!3;CL:0000988!6.21e-08!182;CL:0002031!7.36e-08!124;CL:0000542!1.06e-07!53;CL:0000051!1.06e-07!53;CL:0002032!2.69e-07!165;CL:0000837!2.69e-07!165;CL:0000838!8.47e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.44e-23;24!CL:0002541;9.42e-13;3!CL:0000946;1.98e-10;1!CL:0000786;1.98e-10;1!CL:0000542;4.24e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.26e-23,24;CL:0000826,1.26e-23,24;CL:0000838,2.69e-16,52;CL:0000542,5.84e-16,53;CL:0000051,5.84e-16,53;CL:0002541,7.86e-13,3;CL:0002087,3.29e-11,115;CL:0002031,1.18e-10,120;CL:0000988,1.57e-10,177;CL:0000946,1.89e-10,1;CL:0000786,1.89e-10,1;CL:0000980,1.89e-10,1;CL:0000738,3.71e-09,136;CL:0002032,2.08e-07,161;CL:0000837,2.08e-07,161;CL:0000037,5.19e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.45e-10;1!CL:0000051;4.24e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.12e-12!10 | |ontology_enrichment_disease=DOID:0060058!3.12e-12!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;6.70e-15;10!DOID:0060060;6.73e-11;1!DOID:0060061;6.73e-11;1!DOID:8691;6.73e-11;1!DOID:630;7.40e-11;1!DOID:0050177;7.40e-11;1!DOID:0050427;7.40e-11;1!DOID:2355;2.28e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.01e-15,10;DOID:0060060,6.73e-11,1;DOID:0060061,6.73e-11,1;DOID:8691,6.73e-11,1;DOID:630,7.40e-11,1;DOID:0050177,7.40e-11,1;DOID:0050427,7.40e-11,1;DOID:2355,2.28e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.05e-09!7;UBERON:0002193!3.87e-09!112;UBERON:0003124!4.46e-09!7;UBERON:0002106!1.11e-08!3;UBERON:0004854!1.11e-08!3;UBERON:0009034!1.11e-08!3;UBERON:0002095!1.11e-08!3;UBERON:0004782!1.11e-08!3;UBERON:0003281!1.11e-08!3;UBERON:0009664!1.11e-08!3;UBERON:0002296!1.11e-08!3;UBERON:0005602!1.11e-08!3;UBERON:0001179!1.11e-08!3;UBERON:0006293!1.11e-08!3;UBERON:0000476!1.89e-08!3;UBERON:0000920!1.89e-08!3;UBERON:0002405!5.36e-07!115 | |ontology_enrichment_uberon=UBERON:0004177!3.05e-09!7;UBERON:0002193!3.87e-09!112;UBERON:0003124!4.46e-09!7;UBERON:0002106!1.11e-08!3;UBERON:0004854!1.11e-08!3;UBERON:0009034!1.11e-08!3;UBERON:0002095!1.11e-08!3;UBERON:0004782!1.11e-08!3;UBERON:0003281!1.11e-08!3;UBERON:0009664!1.11e-08!3;UBERON:0002296!1.11e-08!3;UBERON:0005602!1.11e-08!3;UBERON:0001179!1.11e-08!3;UBERON:0006293!1.11e-08!3;UBERON:0000476!1.89e-08!3;UBERON:0000920!1.89e-08!3;UBERON:0002405!5.36e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.49e-13;24!UBERON:0003124;9.42e-13;3!UBERON:0000920;9.42e-13;3!UBERON:0002331;8.05e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,4.44e-13,24;UBERON:0000920,7.86e-13,3;UBERON:0003124,5.82e-12,7;UBERON:0002331,8.05e-09,10;UBERON:0000358,8.05e-09,10;UBERON:0000307,8.05e-09,10;UBERON:0000091,8.05e-09,10;UBERON:0000087,8.05e-09,10;UBERON:0007010,8.05e-09,10;UBERON:0007806,8.05e-09,10;UBERON:0008780,8.05e-09,10;UBERON:0005728,8.05e-09,10 | |||
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| ||
|short_description=p2@CU677281 | |short_description=p2@CU677281 | ||
}} | }} |
Latest revision as of 08:37, 26 July 2015
Short description: | p2@CU677281 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU677281_5end |
Coexpression cluster: | C205_mycosis_cord_hairy_xeroderma_CD4_B_b |
Association with transcript: | 25bp_to_CU677281_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.26e-23 | 24 |
pro-B cell | 1.26e-23 | 24 |
lymphoid lineage restricted progenitor cell | 2.69e-16 | 52 |
lymphocyte | 5.84e-16 | 53 |
common lymphoid progenitor | 5.84e-16 | 53 |
chorionic membrane mesenchymal stem cell | 7.86e-13 | 3 |
nongranular leukocyte | 3.29e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.18e-10 | 120 |
hematopoietic cell | 1.57e-10 | 177 |
antibody secreting cell | 1.89e-10 | 1 |
plasma cell | 1.89e-10 | 1 |
plasmablast | 1.89e-10 | 1 |
leukocyte | 3.71e-09 | 136 |
hematopoietic oligopotent progenitor cell | 2.08e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-07 | 161 |
hematopoietic stem cell | 5.19e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 4.44e-13 | 24 |
egg chorion | 7.86e-13 | 3 |
chorion | 5.82e-12 | 7 |
umbilical cord | 8.05e-09 | 10 |
blastocyst | 8.05e-09 | 10 |
blastula | 8.05e-09 | 10 |
bilaminar disc | 8.05e-09 | 10 |
inner cell mass | 8.05e-09 | 10 |
cleaving embryo | 8.05e-09 | 10 |
connecting stalk | 8.05e-09 | 10 |
inner cell mass derived epiblast | 8.05e-09 | 10 |
extraembryonic mesoderm | 8.05e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.01e-15 | 10 |
non-Hodgkin lymphoma | 6.73e-11 | 1 |
cutaneous T cell lymphoma | 6.73e-11 | 1 |
mycosis fungoides | 6.73e-11 | 1 |
genetic disease | 7.40e-11 | 1 |
monogenic disease | 7.40e-11 | 1 |
xeroderma pigmentosum | 7.40e-11 | 1 |
anemia | 2.28e-10 | 1 |