FFCP PHASE1:Hg19::chr19:47998907..47998916,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:47998907..47998916,- | |||
|coexpression_cluster_id=C3808 | |coexpression_cluster_id=C3808 | ||
|description=CAGE_peak_at_chr19:47998907..47998916,- | |description=CAGE_peak_at_chr19:47998907..47998916,- | ||
|id=chr19:47998907..47998916,- | |id=chr19:47998907..47998916,- | ||
|ontology_enrichment_celltype=CL:0000167!1.57e-10!1;CL:0000164!1.57e-10!1;CL:0000502!1.57e-10!1;CL:0000172!1.57e-10!1;CL:0000173!1.57e-10!1;CL:0002351!1.57e-10!1 | |ontology_enrichment_celltype=CL:0000167!1.57e-10!1;CL:0000164!1.57e-10!1;CL:0000502!1.57e-10!1;CL:0000172!1.57e-10!1;CL:0000173!1.57e-10!1;CL:0002351!1.57e-10!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4430!1.57e-10!1 | |ontology_enrichment_disease=DOID:4430!1.57e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr19:47998907..47998916,- | |short_description=p@chr19:47998907..47998916,- | ||
}} | }} |
Latest revision as of 15:32, 27 July 2015
Short description: | p@chr19:47998907..47998916, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47998907..47998916, - |
Coexpression cluster: | C3808_thymus_brain_acute_parietal_occipital_CD8_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 6.60e-50 | 4 |
hemolymphoid system gland | 6.60e-50 | 4 |
thymic region | 6.60e-50 | 4 |
pharyngeal gland | 6.60e-50 | 4 |
thymus primordium | 6.60e-50 | 4 |
pharyngeal epithelium | 9.87e-34 | 6 |
hemopoietic organ | 4.21e-29 | 7 |
immune organ | 4.21e-29 | 7 |
neck | 9.44e-21 | 10 |
gland of gut | 9.44e-21 | 10 |
chordate pharynx | 9.44e-21 | 10 |
pharyngeal region of foregut | 9.44e-21 | 10 |
pharynx | 5.63e-19 | 11 |
entire pharyngeal arch endoderm | 5.63e-19 | 11 |
early pharyngeal endoderm | 5.63e-19 | 11 |
pharyngeal arch system | 4.81e-12 | 18 |
upper respiratory tract | 1.81e-11 | 19 |
respiratory system epithelium | 4.06e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 7.15e-08 | 29 |