FFCP PHASE1:Hg19::chr19:507487..507508,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91978 | |EntrezGene=91978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25058 | |HGNC=25058 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZTW0 | |UniProt=Q6ZTW0 | ||
|association_with_transcript=0bp_to_ENST00000359315,ENST00000388800,NM_033513,uc002lou.2_5end | |association_with_transcript=0bp_to_ENST00000359315,ENST00000388800,NM_033513,uc002lou.2_5end | ||
|cluster_id=chr19:507487..507508,+ | |||
|coexpression_cluster_id=C1437 | |coexpression_cluster_id=C1437 | ||
|description=CAGE_peak_1_at_TPGS1_5end | |description=CAGE_peak_1_at_TPGS1_5end | ||
|id=chr19:507487..507508,+ | |id=chr19:507487..507508,+ | ||
|ontology_enrichment_celltype=CL:0000222!1.82e-09!119;CL:0000183!4.21e-08!59;CL:0000359!1.76e-07!32;CL:0000192!6.26e-07!42;CL:0000514!6.26e-07!42;CL:0000393!8.46e-07!60;CL:0000211!8.46e-07!60 | |ontology_enrichment_celltype=CL:0000222!1.82e-09!119;CL:0000183!4.21e-08!59;CL:0000359!1.76e-07!32;CL:0000192!6.26e-07!42;CL:0000514!6.26e-07!42;CL:0000393!8.46e-07!60;CL:0000211!8.46e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.50e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.80e-10,121;CL:0000359,1.76e-07,32;CL:0000192,2.33e-07,43;CL:0000514,2.33e-07,43;CL:0000393,3.53e-07,61;CL:0000211,3.53e-07,61;CL:0000187,6.19e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!6.83e-11!42;UBERON:0003509!6.83e-11!42;UBERON:0004572!6.83e-11!42;UBERON:0001981!3.28e-09!60;UBERON:0007500!3.28e-09!60;UBERON:0004537!3.28e-09!60;UBERON:0006965!3.28e-09!60;UBERON:0002049!7.25e-09!79;UBERON:0007798!7.25e-09!79;UBERON:0004573!1.36e-08!33;UBERON:0004571!1.36e-08!33;UBERON:0004872!1.45e-08!84;UBERON:0000055!1.68e-08!69;UBERON:0004535!7.11e-08!110;UBERON:0001009!1.63e-07!113 | |ontology_enrichment_uberon=UBERON:0001637!6.83e-11!42;UBERON:0003509!6.83e-11!42;UBERON:0004572!6.83e-11!42;UBERON:0001981!3.28e-09!60;UBERON:0007500!3.28e-09!60;UBERON:0004537!3.28e-09!60;UBERON:0006965!3.28e-09!60;UBERON:0002049!7.25e-09!79;UBERON:0007798!7.25e-09!79;UBERON:0004573!1.36e-08!33;UBERON:0004571!1.36e-08!33;UBERON:0004872!1.45e-08!84;UBERON:0000055!1.68e-08!69;UBERON:0004535!7.11e-08!110;UBERON:0001009!1.63e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.91e-08;42!UBERON:0003509;5.91e-08;42!UBERON:0004572;5.91e-08;42!UBERON:0004573;8.53e-08;33!UBERON:0004571;8.53e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,6.83e-11,42;UBERON:0003509,6.83e-11,42;UBERON:0004572,6.83e-11,42;UBERON:0007500,1.81e-09,59;UBERON:0001981,1.81e-09,59;UBERON:0004537,1.81e-09,59;UBERON:0006965,1.81e-09,59;UBERON:0002049,4.54e-09,78;UBERON:0007798,4.54e-09,78;UBERON:0004872,9.37e-09,83;UBERON:0000055,1.02e-08,68;UBERON:0004573,1.36e-08,33;UBERON:0004571,1.36e-08,33;UBERON:0007503,2.69e-08,78;UBERON:0004535,5.08e-08,109;UBERON:0001009,1.19e-07,112;UBERON:0003077,9.63e-07,72;UBERON:0007285,9.63e-07,72 | |||
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| ||
|short_description=p1@TPGS1 | |short_description=p1@TPGS1 | ||
}} | }} |
Latest revision as of 10:40, 19 September 2015
Short description: | p1@TPGS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPGS1_5end |
Coexpression cluster: | C1437_Mesenchymal_Osteoblast_Renal_Pericytes_Placental_Fibroblast_Nucleus |
Association with transcript: | 0bp_to_ENST00000359315, ENST00000388800, NM_033513, uc002lou.2_5end |
EntrezGene: | TPGS1 |
HGNC: | 25058 |
UniProt: | Q6ZTW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.80e-10 | 121 |
vascular associated smooth muscle cell | 1.76e-07 | 32 |
smooth muscle cell | 2.33e-07 | 43 |
smooth muscle myoblast | 2.33e-07 | 43 |
electrically responsive cell | 3.53e-07 | 61 |
electrically active cell | 3.53e-07 | 61 |
muscle cell | 6.19e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
artery | 6.83e-11 | 42 |
arterial blood vessel | 6.83e-11 | 42 |
arterial system | 6.83e-11 | 42 |
epithelial tube open at both ends | 1.81e-09 | 59 |
blood vessel | 1.81e-09 | 59 |
blood vasculature | 1.81e-09 | 59 |
vascular cord | 1.81e-09 | 59 |
vasculature | 4.54e-09 | 78 |
vascular system | 4.54e-09 | 78 |
splanchnic layer of lateral plate mesoderm | 9.37e-09 | 83 |
vessel | 1.02e-08 | 68 |
systemic artery | 1.36e-08 | 33 |
systemic arterial system | 1.36e-08 | 33 |
epithelial vesicle | 2.69e-08 | 78 |
cardiovascular system | 5.08e-08 | 109 |
circulatory system | 1.19e-07 | 112 |
paraxial mesoderm | 9.63e-07 | 72 |
presumptive paraxial mesoderm | 9.63e-07 | 72 |