FFCP PHASE1:Hg19::chr1:155804425..155804436,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:155804425..155804436,- | |||
|coexpression_cluster_id=C157 | |coexpression_cluster_id=C157 | ||
|description=CAGE_peak_at_chr1:155804425..155804436,- | |description=CAGE_peak_at_chr1:155804425..155804436,- | ||
|id=chr1:155804425..155804436,- | |id=chr1:155804425..155804436,- | ||
|ontology_enrichment_celltype=CL:0002603!7.97e-09!3;CL:0002322!8.07e-09!5;CL:0000064!3.39e-08!3;CL:0005012!3.39e-08!3;CL:0000067!3.39e-08!3;CL:0002304!3.39e-08!3;CL:0000708!4.14e-08!3;CL:0002319!4.61e-08!25;CL:0000133!3.21e-07!59;CL:0000039!4.68e-07!7;CL:0000586!4.68e-07!7 | |ontology_enrichment_celltype=CL:0002603!7.97e-09!3;CL:0002322!8.07e-09!5;CL:0000064!3.39e-08!3;CL:0005012!3.39e-08!3;CL:0000067!3.39e-08!3;CL:0002304!3.39e-08!3;CL:0000708!4.14e-08!3;CL:0002319!4.61e-08!25;CL:0000133!3.21e-07!59;CL:0000039!4.68e-07!7;CL:0000586!4.68e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.69e-36;7!CL:0000586;9.69e-36;7!CL:0000047;6.93e-09;2!CL:0002549;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.70e-36,7;CL:0000586,9.70e-36,7;CL:0002549,8.09e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.67e-25;10!UBERON:0005564;3.67e-25;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;1.05e-17;8!DOID:3095;1.05e-17;22!DOID:2994;1.05e-17;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,8.34e-18,8;DOID:3095,1.05e-17,22;DOID:2994,1.05e-17,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000473;2.46e-31;8!UBERON:0003135;6.49e-23;11!UBERON:0000991;3.59e-12;21!UBERON:0003101;1.24e-11;22!UBERON:0000079;1.24e-11;22!UBERON:0005629;6.93e-09;2!UBERON:0005358;6.93e-09;2!UBERON:0001886;6.93e-09;2!UBERON:0004086;6.93e-09;2!UBERON:0005282;6.93e-09;2!UBERON:0005281;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.46e-31,8;UBERON:0003135,6.49e-23,11;UBERON:0000991,3.59e-12,21;UBERON:0009196,3.59e-12,21;UBERON:0009117,3.59e-12,21;UBERON:0005564,3.59e-12,21;UBERON:0004176,1.24e-11,22;UBERON:0003101,1.24e-11,22;UBERON:0000079,1.24e-11,22;UBERON:0005629,8.09e-09,2;UBERON:0005358,8.09e-09,2;UBERON:0001886,8.09e-09,2;UBERON:0004086,8.09e-09,2;UBERON:0005282,8.09e-09,2;UBERON:0005281,8.09e-09,2 | |||
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| ||
|short_description=p@chr1:155804425..155804436,- | |short_description=p@chr1:155804425..155804436,- | ||
}} | }} |
Latest revision as of 22:20, 27 July 2015
Short description: | p@chr1:155804425..155804436, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:155804425..155804436, - |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.70e-36 | 7 |
germ cell | 9.70e-36 | 7 |
fibroblast of choroid plexus | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 2.46e-31 | 8 |
male reproductive organ | 6.49e-23 | 11 |
gonad | 3.59e-12 | 21 |
indifferent external genitalia | 3.59e-12 | 21 |
indifferent gonad | 3.59e-12 | 21 |
gonad primordium | 3.59e-12 | 21 |
external genitalia | 1.24e-11 | 22 |
male organism | 1.24e-11 | 22 |
male reproductive system | 1.24e-11 | 22 |
vascular plexus | 8.09e-09 | 2 |
ventricle of nervous system | 8.09e-09 | 2 |
choroid plexus | 8.09e-09 | 2 |
brain ventricle | 8.09e-09 | 2 |
ventricular system of brain | 8.09e-09 | 2 |
ventricular system of central nervous system | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 8.34e-18 | 8 |
germ cell and embryonal cancer | 1.05e-17 | 22 |
germ cell cancer | 1.05e-17 | 22 |