FFCP PHASE1:Hg19::chr1:186275893..186275905,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:186275893..186275905,+ | |||
|coexpression_cluster_id=C287 | |coexpression_cluster_id=C287 | ||
|description=CAGE_peak_at_chr1:186275893..186275905,+ | |description=CAGE_peak_at_chr1:186275893..186275905,+ | ||
|id=chr1:186275893..186275905,+ | |id=chr1:186275893..186275905,+ | ||
|ontology_enrichment_celltype=CL:0002570!2.57e-09!8;CL:0000153!2.70e-09!9;CL:0000447!2.70e-09!9;CL:0002521!1.87e-07!3;CL:0000135!2.37e-07!3;CL:0000386!2.37e-07!3;CL:0000388!2.37e-07!3;CL:0000667!9.50e-07!6;CL:0000058!9.50e-07!6;CL:0000138!9.50e-07!6 | |ontology_enrichment_celltype=CL:0002570!2.57e-09!8;CL:0000153!2.70e-09!9;CL:0000447!2.70e-09!9;CL:0002521!1.87e-07!3;CL:0000135!2.37e-07!3;CL:0000386!2.37e-07!3;CL:0000388!2.37e-07!3;CL:0000667!9.50e-07!6;CL:0000058!9.50e-07!6;CL:0000138!9.50e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.82e-21;9!CL:0000447;1.82e-21;9!CL:0000138;6.51e-15;6!CL:0000327;1.24e-12;15!CL:0000499;3.81e-11;28!CL:0002570;2.16e-10;8!CL:0000214;3.03e-08;3!CL:0002521;4.46e-08;3!CL:0000135;6.54e-08;3!CL:0000388;6.54e-08;3!CL:0002582;1.67e-07;3!CL:0002334;9.80e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.76e-21,9;CL:0000447,1.76e-21,9;CL:0000058,6.18e-15,6;CL:0000138,6.18e-15,6;CL:0000327,1.21e-12,15;CL:0000499,3.63e-11,28;CL:0002570,2.16e-10,8;CL:0000214,3.08e-08,3;CL:0002521,4.70e-08,3;CL:0000135,6.00e-08,3;CL:0000388,6.00e-08,3;CL:0002582,1.41e-07,3;CL:0002334,8.36e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.47e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!5.24e-17!14;UBERON:0007023!2.23e-12!115;UBERON:0002072!1.74e-07!5;UBERON:0002190!1.87e-07!3;UBERON:0000043!2.37e-07!3;UBERON:0004905!4.95e-07!5;UBERON:0000982!4.95e-07!5;UBERON:0004770!4.95e-07!5 | |ontology_enrichment_uberon=UBERON:0001013!5.24e-17!14;UBERON:0007023!2.23e-12!115;UBERON:0002072!1.74e-07!5;UBERON:0002190!1.87e-07!3;UBERON:0000043!2.37e-07!3;UBERON:0004905!4.95e-07!5;UBERON:0000982!4.95e-07!5;UBERON:0004770!4.95e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.22e-22;14!UBERON:0002072;6.06e-10;5!UBERON:0006915;3.03e-08;3!UBERON:0007616;3.03e-08;3!UBERON:0002217;3.03e-08;3!UBERON:0002018;3.03e-08;3!UBERON:0002190;4.46e-08;3!UBERON:0007846;6.54e-08;3!UBERON:0000043;6.54e-08;3!UBERON:0007845;6.54e-08;3!UBERON:0002107;6.02e-07;19!UBERON:0006925;6.02e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.35e-22,14;UBERON:0002072,5.44e-10,5;UBERON:0006915,3.08e-08,3;UBERON:0007616,3.08e-08,3;UBERON:0002217,3.08e-08,3;UBERON:0002018,3.08e-08,3;UBERON:0002190,4.70e-08,3;UBERON:0007846,6.00e-08,3;UBERON:0000043,6.00e-08,3;UBERON:0007845,6.00e-08,3;UBERON:0002107,5.95e-07,19;UBERON:0006925,5.95e-07,19;UBERON:0008836,5.95e-07,19 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.140954404095971,0,0,0,2.53299878168311,32.2177135447684,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,1.40900451698243,0.780356085359269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67453965722959,0,29.4038433490472,32.6067238290951,19.4653948121054,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05950199351452,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8291614912042,34.3989525837169,15.9513274803979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,0,0,0,0,0,0,0,0,0,0,1.37060810223918,0,0,0,0,0,0,0.907170879989041,0,0,0,0.128139149255701,0,0,1.48418066444991,0,1.77561725313127,1.56041596426237,0,1.62694529843943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81251743096572,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,10.7664894001809,19.4283986846342,0,0,0,0,0,4.89547764039252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61842532213849,0,0,0,0,0,0,0,0,0,0,0,3.98495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,2.21153028699708,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.19351266257817,0.219267951258557,0,0.484945082442097,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.798716001995964,1.28767814440971,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,18.7586859107946,2.65013777824443,0,0,0,0,0.854299300541557,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,7.91050455300432,0.233713309847224,3.88364103051829,0.378806010550178,0.251567901752575,7.11848977277229,0.457680136793847,0.453692771289717,8.54904603205293,0,0,0,0,3.7323558705677,0,0,0,0.380805212168795,0,0,0,0,0,0,0,1.01024846629776,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,1.94228651156368,0.923965261706223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,2.97596014533401,7.85698568673411,0.432626562123789,0,0,0,0,0,0,0,0.378893491091197,0,0,0,1.49263787330687,0,0.0645889098360061,0.31037357147929,0,0.0636471582781649,0,0.870866991587845,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,2.61655931668334,0 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|phase1_expression=0.181678379270557,1.2846031433459,0.140954404095971,0,0,0,2.53299878168311,32.2177135447684,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,1.40900451698243,0.780356085359269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67453965722959,0,29.4038433490472,32.6067238290951,19.4653948121054,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05950199351452,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8291614912042,34.3989525837169,15.9513274803979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,0,0,0,0,0,0,0,0,0,0,1.37060810223918,0,0,0,0,0,0,0.907170879989041,0,0,0,0.128139149255701,0,0,1.48418066444991,0,1.77561725313127,1.56041596426237,0,1.62694529843943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81251743096572,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,10.7664894001809,19.4283986846342,0,0,0,0,0,4.89547764039252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61842532213849,0,0,0,0,0,0,0,0,0,0,0,3.98495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,2.21153028699708,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.19351266257817,0.219267951258557,0,0.484945082442097,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.798716001995964,1.28767814440971,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,18.7586859107946,2.65013777824443,0,0,0,0,0.854299300541557,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,7.91050455300432,0.233713309847224,3.88364103051829,0.378806010550178,0.251567901752575,7.11848977277229,0.457680136793847,0.453692771289717,8.54904603205293,0,0,0,0,3.7323558705677,0,0,0,0.380805212168795,0,0,0,0,0,0,0,1.01024846629776,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,1.94228651156368,0.923965261706223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,2.97596014533401,7.85698568673411,0.432626562123789,0,0,0,0,0,0,0,0.378893491091197,0,0,0,1.49263787330687,0,0.0645889098360061,0.31037357147929,0,0.0636471582781649,0,0.870866991587845,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,2.61655931668334,0 | ||
|short_description=p@chr1:186275893..186275905,+ | |short_description=p@chr1:186275893..186275905,+ | ||
}} | }} |
Latest revision as of 01:29, 28 July 2015
Short description: | p@chr1:186275893..186275905, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186275893..186275905, + |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.76e-21 | 9 |
carbohydrate secreting cell | 1.76e-21 | 9 |
chondroblast | 6.18e-15 | 6 |
chondrocyte | 6.18e-15 | 6 |
extracellular matrix secreting cell | 1.21e-12 | 15 |
stromal cell | 3.63e-11 | 28 |
mesenchymal stem cell of adipose | 2.16e-10 | 8 |
synovial cell | 3.08e-08 | 3 |
subcutaneous fat cell | 4.70e-08 | 3 |
fibrocyte | 6.00e-08 | 3 |
tendon cell | 6.00e-08 | 3 |
visceral preadipocyte | 1.41e-07 | 3 |
preadipocyte | 8.36e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.35e-22 | 14 |
hypodermis | 5.44e-10 | 5 |
stratified squamous epithelium | 3.08e-08 | 3 |
layer of synovial tissue | 3.08e-08 | 3 |
synovial joint | 3.08e-08 | 3 |
synovial membrane of synovial joint | 3.08e-08 | 3 |
subcutaneous adipose tissue | 4.70e-08 | 3 |
dense regular connective tissue | 6.00e-08 | 3 |
tendon | 6.00e-08 | 3 |
regular connective tissue | 6.00e-08 | 3 |
liver | 5.95e-07 | 19 |
digestive gland | 5.95e-07 | 19 |
liver bud | 5.95e-07 | 19 |