FFCP PHASE1:Hg19::chr1:186275917..186275955,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:186275917..186275955,+ | |||
|coexpression_cluster_id=C287 | |coexpression_cluster_id=C287 | ||
|description=CAGE_peak_at_chr1:186275917..186275955,+ | |description=CAGE_peak_at_chr1:186275917..186275955,+ | ||
|id=chr1:186275917..186275955,+ | |id=chr1:186275917..186275955,+ | ||
|ontology_enrichment_celltype=CL:0000153!2.61e-10!9;CL:0000447!2.61e-10!9;CL:0000667!2.01e-08!6;CL:0000058!2.01e-08!6;CL:0000138!2.01e-08!6;CL:0002570!1.26e-07!8 | |ontology_enrichment_celltype=CL:0000153!2.61e-10!9;CL:0000447!2.61e-10!9;CL:0000667!2.01e-08!6;CL:0000058!2.01e-08!6;CL:0000138!2.01e-08!6;CL:0002570!1.26e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000153;4.26e-28;9!CL:0000447;4.26e-28;9!CL:0000138;5.14e-22;6!CL:0000327;1.75e-16;15!CL:0000499;1.17e-13;28!CL:0000214;4.58e-08;3!CL:0000135;9.39e-08;3!CL:0000388;9.39e-08;3!CL:0002582;1.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.71e-28,9;CL:0000447,4.71e-28,9;CL:0000058,5.85e-22,6;CL:0000138,5.85e-22,6;CL:0000327,1.86e-16,15;CL:0000499,1.17e-13,28;CL:0000214,4.50e-08,3;CL:0000135,8.63e-08,3;CL:0000388,8.63e-08,3;CL:0002582,1.69e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;7.68e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.93e-15!115;UBERON:0001013!5.47e-09!14 | |ontology_enrichment_uberon=UBERON:0007023!2.93e-15!115;UBERON:0001013!5.47e-09!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002081;1.51e-10;2!UBERON:0006915;4.58e-08;3!UBERON:0007616;4.58e-08;3!UBERON:0002217;4.58e-08;3!UBERON:0002018;4.58e-08;3!UBERON:0007846;9.39e-08;3!UBERON:0000043;9.39e-08;3!UBERON:0007845;9.39e-08;3!UBERON:0004151;2.59e-07;3!UBERON:0002107;9.92e-07;19!UBERON:0006925;9.92e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,1.37e-10,2;UBERON:0010227,1.37e-10,2;UBERON:0006915,4.50e-08,3;UBERON:0007616,4.50e-08,3;UBERON:0002217,4.50e-08,3;UBERON:0002018,4.50e-08,3;UBERON:0007846,8.63e-08,3;UBERON:0000043,8.63e-08,3;UBERON:0007845,8.63e-08,3;UBERON:0004151,2.42e-07,3;UBERON:0002107,9.98e-07,19;UBERON:0006925,9.98e-07,19;UBERON:0008836,9.98e-07,19 | |||
|phase1_expression=0.181678379270557,1.92690471501885,0.140954404095971,0,0.446961094427288,0,0,24.6370750636464,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651844533267181,0,0,0,0,0.221533894583621,0.270803863765016,0.768547918354051,0.780356085359269,0,0,0,0,0.535081656179426,0,0.113309342697566,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,9.03597880961416,2.00535164254356,18.8300474649071,102.591887169592,28.7114573478555,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756787138224657,4.03323147135999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,53.237114625169,39.313088667105,25.4039659873004,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,1.56640925970192,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,2.46381468041427,0,1.51073491997947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.07762831779956,20.7455782564738,0,0,0,0,0,4.0481834334015,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0.111443384277478,0,0,0,0,0,0,0,0,0,3.38721580026819,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0,0,0,2.21153028699708,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.387025325156341,0.219267951258557,0.0821154570532092,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,1.43574604915363,0.599037001496973,1.28767814440971,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,13.1897010310274,1.32506888912221,0,0,0,0,1.06787412567695,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,6.26870172124871,0.233713309847224,4.99325275352352,0.378806010550178,0.50313580350515,8.00830099436882,0.686520205190771,0.756154618816195,5.90661362214566,0,0,0,0,3.7323558705677,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,2.48105589194647,0.175871244359621,0,0,0,1.21393120847326,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.923965261706223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,7.85698568673411,2.59575937274273,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.639701945702943,0.23806443146374,0.322944549180031,0.186224142887574,0,0.12729431655633,0,0.653150243690884,0,0.0673520530145875,0.645499848534087,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | |phase1_expression=0.181678379270557,1.92690471501885,0.140954404095971,0,0.446961094427288,0,0,24.6370750636464,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651844533267181,0,0,0,0,0.221533894583621,0.270803863765016,0.768547918354051,0.780356085359269,0,0,0,0,0.535081656179426,0,0.113309342697566,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,9.03597880961416,2.00535164254356,18.8300474649071,102.591887169592,28.7114573478555,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756787138224657,4.03323147135999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,53.237114625169,39.313088667105,25.4039659873004,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,1.56640925970192,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,2.46381468041427,0,1.51073491997947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.07762831779956,20.7455782564738,0,0,0,0,0,4.0481834334015,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0.111443384277478,0,0,0,0,0,0,0,0,0,3.38721580026819,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0,0,0,2.21153028699708,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0.387025325156341,0.219267951258557,0.0821154570532092,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,1.43574604915363,0.599037001496973,1.28767814440971,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,13.1897010310274,1.32506888912221,0,0,0,0,1.06787412567695,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,6.26870172124871,0.233713309847224,4.99325275352352,0.378806010550178,0.50313580350515,8.00830099436882,0.686520205190771,0.756154618816195,5.90661362214566,0,0,0,0,3.7323558705677,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,2.48105589194647,0.175871244359621,0,0,0,1.21393120847326,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.923965261706223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,7.85698568673411,2.59575937274273,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.639701945702943,0.23806443146374,0.322944549180031,0.186224142887574,0,0.12729431655633,0,0.653150243690884,0,0.0673520530145875,0.645499848534087,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | ||
|short_description=p@chr1:186275917..186275955,+ | |short_description=p@chr1:186275917..186275955,+ | ||
}} | }} |
Latest revision as of 01:29, 28 July 2015
Short description: | p@chr1:186275917..186275955, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186275917..186275955, + |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.71e-28 | 9 |
carbohydrate secreting cell | 4.71e-28 | 9 |
chondroblast | 5.85e-22 | 6 |
chondrocyte | 5.85e-22 | 6 |
extracellular matrix secreting cell | 1.86e-16 | 15 |
stromal cell | 1.17e-13 | 28 |
synovial cell | 4.50e-08 | 3 |
fibrocyte | 8.63e-08 | 3 |
tendon cell | 8.63e-08 | 3 |
visceral preadipocyte | 1.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 1.37e-10 | 2 |
future cardiac atrium | 1.37e-10 | 2 |
stratified squamous epithelium | 4.50e-08 | 3 |
layer of synovial tissue | 4.50e-08 | 3 |
synovial joint | 4.50e-08 | 3 |
synovial membrane of synovial joint | 4.50e-08 | 3 |
dense regular connective tissue | 8.63e-08 | 3 |
tendon | 8.63e-08 | 3 |
regular connective tissue | 8.63e-08 | 3 |
cardiac chamber | 2.42e-07 | 3 |
liver | 9.98e-07 | 19 |
digestive gland | 9.98e-07 | 19 |
liver bud | 9.98e-07 | 19 |