FFCP PHASE1:Hg19::chr1:212968135..212968164,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128387 | |EntrezGene=128387 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27010 | |HGNC=27010 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000525569_5end | |association_with_transcript=-47bp_to_ENST00000525569_5end | ||
|cluster_id=chr1:212968135..212968164,+ | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_3_at_TATDN3_5end | |description=CAGE_peak_3_at_TATDN3_5end | ||
|id=chr1:212968135..212968164,+ | |id=chr1:212968135..212968164,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.18e-23!140;CL:0000037!6.43e-23!172;CL:0000566!6.43e-23!172;CL:0002087!2.86e-22!119;CL:0000945!5.04e-22!24;CL:0000826!5.04e-22!24;CL:0000988!1.07e-20!182;CL:0002032!3.82e-20!165;CL:0000837!3.82e-20!165;CL:0002031!1.77e-17!124;CL:0000542!2.35e-11!53;CL:0000051!2.35e-11!53;CL:0000766!6.03e-11!76;CL:0000236!1.98e-10!14;CL:0000838!1.98e-10!52;CL:0002194!4.81e-10!63;CL:0000576!4.81e-10!63;CL:0000040!4.81e-10!63;CL:0000559!4.81e-10!63;CL:0000763!1.05e-09!112;CL:0000049!1.05e-09!112;CL:0002009!1.53e-09!65;CL:0000839!2.02e-08!70;CL:0000557!3.23e-08!71;CL:0002393!5.33e-08!9;CL:0002397!5.33e-08!9;CL:0000784!2.58e-07!3;CL:0002057!2.92e-07!42;CL:0000875!3.47e-07!3;CL:0002396!3.47e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.18e-23!140;CL:0000037!6.43e-23!172;CL:0000566!6.43e-23!172;CL:0002087!2.86e-22!119;CL:0000945!5.04e-22!24;CL:0000826!5.04e-22!24;CL:0000988!1.07e-20!182;CL:0002032!3.82e-20!165;CL:0000837!3.82e-20!165;CL:0002031!1.77e-17!124;CL:0000542!2.35e-11!53;CL:0000051!2.35e-11!53;CL:0000766!6.03e-11!76;CL:0000236!1.98e-10!14;CL:0000838!1.98e-10!52;CL:0002194!4.81e-10!63;CL:0000576!4.81e-10!63;CL:0000040!4.81e-10!63;CL:0000559!4.81e-10!63;CL:0000763!1.05e-09!112;CL:0000049!1.05e-09!112;CL:0002009!1.53e-09!65;CL:0000839!2.02e-08!70;CL:0000557!3.23e-08!71;CL:0002393!5.33e-08!9;CL:0002397!5.33e-08!9;CL:0000784!2.58e-07!3;CL:0002057!2.92e-07!42;CL:0000875!3.47e-07!3;CL:0002396!3.47e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.85e-28;13!CL:0000784;5.84e-25;3!CL:0000945;1.66e-24;24!CL:0000875;2.00e-24;3!CL:0002396;2.00e-24;3!CL:0002393;3.14e-12;6!CL:0002397;3.14e-12;6!CL:0000542;1.18e-09;53!CL:0000451;3.58e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,7.37e-31,9;CL:0002397,7.37e-31,9;CL:0000236,2.93e-26,14;CL:0000784,5.86e-25,3;CL:0000945,1.74e-24,24;CL:0000826,1.74e-24,24;CL:0000875,1.93e-24,3;CL:0002396,1.93e-24,3;CL:0000738,4.68e-19,136;CL:0002087,3.12e-18,115;CL:0002031,2.42e-17,120;CL:0000037,9.15e-15,168;CL:0000988,7.79e-14,177;CL:0002032,4.09e-12,161;CL:0000837,4.09e-12,161;CL:0000838,1.37e-10,52;CL:0000542,2.30e-10,53;CL:0000051,2.30e-10,53;CL:0000473,3.05e-09,48;CL:0000234,3.05e-09,48;CL:0002194,3.93e-09,59;CL:0000576,3.93e-09,59;CL:0000040,3.93e-09,59;CL:0000559,3.93e-09,59;CL:0002009,8.57e-09,61;CL:0000860,2.69e-08,42;CL:0002057,2.69e-08,42;CL:0000839,4.90e-08,66;CL:0000557,6.73e-08,67;CL:0000766,2.89e-07,72;CL:0000451,3.58e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000051;1.18e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!1.14e-08!51;DOID:0060083!1.14e-08!51 | |ontology_enrichment_disease=DOID:2531!1.14e-08!51;DOID:0060083!1.14e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:4960;6.72e-09;1!DOID:0070004;6.72e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,5.75e-09,1;DOID:0070004,5.75e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.65e-16!102;UBERON:0003061!5.65e-16!102;UBERON:0002193!1.62e-14!112;UBERON:0007023!3.69e-13!115;UBERON:0002405!8.17e-10!115;UBERON:0004177!2.52e-08!7;UBERON:0002371!1.87e-07!80;UBERON:0000178!7.42e-07!15;UBERON:0000179!7.42e-07!15;UBERON:0000463!7.42e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!5.65e-16!102;UBERON:0003061!5.65e-16!102;UBERON:0002193!1.62e-14!112;UBERON:0007023!3.69e-13!115;UBERON:0002405!8.17e-10!115;UBERON:0004177!2.52e-08!7;UBERON:0002371!1.87e-07!80;UBERON:0000178!7.42e-07!15;UBERON:0000179!7.42e-07!15;UBERON:0000463!7.42e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.95e-08;15!UBERON:0000179;2.95e-08;15!UBERON:0000463;2.95e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.19e-12,98;UBERON:0003061,1.19e-12,98;UBERON:0002193,2.94e-11,108;UBERON:0002371,1.93e-08,76;UBERON:0000178,2.78e-08,15;UBERON:0000179,2.78e-08,15;UBERON:0000463,2.78e-08,15;UBERON:0001474,1.02e-07,82;UBERON:0004765,6.74e-07,90 | |||
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| ||
|short_description=p3@TATDN3 | |short_description=p3@TATDN3 | ||
}} | }} |
Latest revision as of 00:51, 25 September 2015
Short description: | p3@TATDN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TATDN3_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -47bp_to_ENST00000525569_5end |
EntrezGene: | TATDN3 |
HGNC: | 27010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.19e-12 | 98 |
blood island | 1.19e-12 | 98 |
hemolymphoid system | 2.94e-11 | 108 |
bone marrow | 1.93e-08 | 76 |
blood | 2.78e-08 | 15 |
haemolymphatic fluid | 2.78e-08 | 15 |
organism substance | 2.78e-08 | 15 |
bone element | 1.02e-07 | 82 |
skeletal element | 6.74e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 5.75e-09 | 1 |
myeloma | 5.75e-09 | 1 |