FFCP PHASE1:Hg19::chr1:46073987..46074014,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:46073987..46074014,- | |||
|coexpression_cluster_id=C130 | |coexpression_cluster_id=C130 | ||
|description=CAGE_peak_at_chr1:46073987..46074014,- | |description=CAGE_peak_at_chr1:46073987..46074014,- | ||
|id=chr1:46073987..46074014,- | |id=chr1:46073987..46074014,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.06e-35;5!CL:0000540;9.15e-18;6!CL:0000404;9.15e-18;6!CL:0002321;5.76e-12;15!CL:0000148;1.42e-10;10!CL:0000147;1.06e-07;14!CL:0002319;6.28e-07;25!CL:0000075;8.85e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.38e-35,5;CL:0000540,9.17e-18,6;CL:0000031,9.17e-18,6;CL:0000404,9.17e-18,6;CL:0000047,1.79e-13,8;CL:0000148,1.24e-10,10;CL:0000541,1.24e-10,10;CL:0000133,2.32e-08,59;CL:0000147,9.68e-08,14;CL:0002319,6.69e-07,25;CL:0000075,8.72e-07,27;CL:0000221,9.01e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;9.15e-18;6 | |||
|ontology_enrichment_disease=DOID:0050687!9.58e-18!143;DOID:162!1.70e-17!235;DOID:14566!6.55e-17!239;DOID:305!2.28e-12!106;DOID:3095!2.19e-08!22;DOID:2994!2.19e-08!22 | |ontology_enrichment_disease=DOID:0050687!9.58e-18!143;DOID:162!1.70e-17!235;DOID:14566!6.55e-17!239;DOID:305!2.28e-12!106;DOID:3095!2.19e-08!22;DOID:2994!2.19e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.66e-08;22!DOID:2994;2.66e-08;22!DOID:4468;8.52e-07;2!DOID:3307;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.77e-08,22;DOID:2994,2.77e-08,22;DOID:3307,6.07e-07,2;DOID:4468,6.80e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr1:46073987..46074014,- | |short_description=p@chr1:46073987..46074014,- | ||
}} | }} |
Latest revision as of 08:43, 28 July 2015
Short description: | p@chr1:46073987..46074014, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:46073987..46074014, - |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.38e-35 | 5 |
neuron | 9.17e-18 | 6 |
neuroblast | 9.17e-18 | 6 |
electrically signaling cell | 9.17e-18 | 6 |
neuronal stem cell | 1.79e-13 | 8 |
melanocyte | 1.24e-10 | 10 |
melanoblast | 1.24e-10 | 10 |
neurectodermal cell | 2.32e-08 | 59 |
pigment cell | 9.68e-08 | 14 |
neural cell | 6.69e-07 | 25 |
columnar/cuboidal epithelial cell | 8.72e-07 | 27 |
ectodermal cell | 9.01e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.77e-08 | 22 |
germ cell cancer | 2.77e-08 | 22 |
teratoma | 6.07e-07 | 2 |
clear cell adenocarcinoma | 6.80e-07 | 2 |