FFCP PHASE1:Hg19::chr20:33851666..33851675,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:33851666..33851675,+ | |||
|coexpression_cluster_id=C1867 | |coexpression_cluster_id=C1867 | ||
|description=CAGE_peak_at_chr20:33851666..33851675,+ | |description=CAGE_peak_at_chr20:33851666..33851675,+ | ||
|id=chr20:33851666..33851675,+ | |id=chr20:33851666..33851675,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.29e-09!254;CL:0000322!5.94e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.29e-09!254;CL:0000322!5.94e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;2.89e-12;3!CL:1000497;7.76e-09;17!CL:0002518;7.76e-09;17!CL:0002188;5.92e-08;5!CL:0000082;6.59e-08;19!CL:0002149;8.97e-07;6!CL:0002255;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.59e-12,3;CL:1000497,7.91e-09,17;CL:0002518,7.91e-09,17;CL:0002188,6.13e-08,5;CL:0000082,6.36e-08,19;CL:0002149,9.49e-07,6;CL:0002255,9.49e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.86e-14!106;DOID:0050687!1.42e-13!143;DOID:162!2.12e-07!235;DOID:14566!4.04e-07!239 | |ontology_enrichment_disease=DOID:305!5.86e-14!106;DOID:0050687!1.42e-13!143;DOID:162!2.12e-07!235;DOID:14566!4.04e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:4468;7.05e-18;2!DOID:3910;1.07e-17;2!DOID:1324;9.24e-10;15!DOID:0050615;3.27e-09;16!DOID:3908;7.01e-08;5!DOID:3001;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.48e-18,2;DOID:3910,9.07e-18,2;DOID:1324,8.85e-10,15;DOID:0050615,3.14e-09,16;DOID:305,3.15e-08,106;DOID:3908,6.55e-08,5;DOID:3001,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0008947!2.44e-13!38;UBERON:0003258!2.44e-13!38;UBERON:0005911!4.77e-12!82;UBERON:0002048!5.63e-11!22;UBERON:0000117!5.63e-11!22;UBERON:0000171!5.63e-11!22;UBERON:0000170!5.63e-11!22;UBERON:0005597!5.63e-11!22;UBERON:0000118!5.63e-11!22;UBERON:0000077!4.09e-10!130;UBERON:0005153!2.01e-09!37;UBERON:0004921!4.71e-09!129;UBERON:0004185!4.71e-09!129;UBERON:0000065!7.43e-09!53;UBERON:0005177!2.05e-08!107;UBERON:0001041!2.54e-08!98;UBERON:0009569!9.27e-08!113;UBERON:0001737!1.21e-07!9;UBERON:0001007!1.24e-07!155;UBERON:0001555!1.24e-07!155;UBERON:0007026!1.24e-07!155;UBERON:0004119!2.12e-07!169;UBERON:0000925!2.12e-07!169;UBERON:0006595!2.12e-07!169;UBERON:0007499!2.31e-07!25;UBERON:0003104!3.19e-07!238;UBERON:0009142!3.19e-07!238;UBERON:0009856!4.83e-07!26;UBERON:0004821!5.94e-07!3;UBERON:0003215!5.94e-07!3;UBERON:0002299!5.94e-07!3;UBERON:0006524!5.94e-07!3;UBERON:0008874!5.94e-07!3;UBERON:0002169!5.94e-07!3;UBERON:0004894!5.94e-07!3 | |ontology_enrichment_uberon=UBERON:0008947!2.44e-13!38;UBERON:0003258!2.44e-13!38;UBERON:0005911!4.77e-12!82;UBERON:0002048!5.63e-11!22;UBERON:0000117!5.63e-11!22;UBERON:0000171!5.63e-11!22;UBERON:0000170!5.63e-11!22;UBERON:0005597!5.63e-11!22;UBERON:0000118!5.63e-11!22;UBERON:0000077!4.09e-10!130;UBERON:0005153!2.01e-09!37;UBERON:0004921!4.71e-09!129;UBERON:0004185!4.71e-09!129;UBERON:0000065!7.43e-09!53;UBERON:0005177!2.05e-08!107;UBERON:0001041!2.54e-08!98;UBERON:0009569!9.27e-08!113;UBERON:0001737!1.21e-07!9;UBERON:0001007!1.24e-07!155;UBERON:0001555!1.24e-07!155;UBERON:0007026!1.24e-07!155;UBERON:0004119!2.12e-07!169;UBERON:0000925!2.12e-07!169;UBERON:0006595!2.12e-07!169;UBERON:0007499!2.31e-07!25;UBERON:0003104!3.19e-07!238;UBERON:0009142!3.19e-07!238;UBERON:0009856!4.83e-07!26;UBERON:0004821!5.94e-07!3;UBERON:0003215!5.94e-07!3;UBERON:0002299!5.94e-07!3;UBERON:0006524!5.94e-07!3;UBERON:0008874!5.94e-07!3;UBERON:0002169!5.94e-07!3;UBERON:0004894!5.94e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.07e-17;2!UBERON:0002173;1.07e-17;2!UBERON:0002186;1.07e-17;2!UBERON:0004821;2.89e-12;3!UBERON:0007499;2.89e-12;3!UBERON:0003215;2.89e-12;3!UBERON:0010368;2.89e-12;3!UBERON:0009911;2.89e-12;3!UBERON:0002299;2.89e-12;3!UBERON:0006524;2.89e-12;3!UBERON:0008874;2.89e-12;3!UBERON:0002169;2.89e-12;3!UBERON:0004894;2.89e-12;3!UBERON:0009856;1.57e-09;4!UBERON:0004802;6.59e-08;19!UBERON:0000115;6.59e-08;19!UBERON:0002048;5.91e-07;22!UBERON:0004807;5.91e-07;22!UBERON:0000117;5.91e-07;22!UBERON:0000171;5.91e-07;22!UBERON:0000170;5.91e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,9.07e-18,2;UBERON:0002173,9.07e-18,2;UBERON:0002186,9.07e-18,2;UBERON:0004821,2.59e-12,3;UBERON:0003215,2.59e-12,3;UBERON:0010368,2.59e-12,3;UBERON:0009911,2.59e-12,3;UBERON:0002299,2.59e-12,3;UBERON:0006524,2.59e-12,3;UBERON:0008874,2.59e-12,3;UBERON:0002169,2.59e-12,3;UBERON:0004894,2.59e-12,3;UBERON:0000058,5.94e-08,19;UBERON:0004802,6.36e-08,19;UBERON:0000115,6.36e-08,19;UBERON:0002048,5.74e-07,22;UBERON:0000117,5.74e-07,22;UBERON:0000171,5.74e-07,22;UBERON:0000170,5.74e-07,22;UBERON:0005597,5.74e-07,22;UBERON:0000118,5.74e-07,22 | |||
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| ||
|short_description=p@chr20:33851666..33851675,+ | |short_description=p@chr20:33851666..33851675,+ | ||
}} | }} |
Latest revision as of 13:22, 28 July 2015
Short description: | p@chr20:33851666..33851675, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33851666..33851675, + |
Coexpression cluster: | C1867_renal_bile_clear_Alveolar_mesothelioma_lung_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.59e-12 | 3 |
kidney cell | 7.91e-09 | 17 |
kidney epithelial cell | 7.91e-09 | 17 |
glomerular endothelial cell | 6.13e-08 | 5 |
epithelial cell of lung | 6.36e-08 | 19 |
epithelial cell of uterus | 9.49e-07 | 6 |
stromal cell of endometrium | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 9.07e-18 | 2 |
alveolar duct | 9.07e-18 | 2 |
bronchiole | 9.07e-18 | 2 |
pulmonary alveolus epithelium | 2.59e-12 | 3 |
alveolus | 2.59e-12 | 3 |
pulmonary lobule | 2.59e-12 | 3 |
lobule | 2.59e-12 | 3 |
alveolus of lung | 2.59e-12 | 3 |
alveolar system | 2.59e-12 | 3 |
pulmonary acinus | 2.59e-12 | 3 |
alveolar sac | 2.59e-12 | 3 |
alveolar wall | 2.59e-12 | 3 |
duct | 5.94e-08 | 19 |
respiratory tract epithelium | 6.36e-08 | 19 |
lung epithelium | 6.36e-08 | 19 |
lung | 5.74e-07 | 22 |
respiratory tube | 5.74e-07 | 22 |
respiration organ | 5.74e-07 | 22 |
pair of lungs | 5.74e-07 | 22 |
lung primordium | 5.74e-07 | 22 |
lung bud | 5.74e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.48e-18 | 2 |
lung adenocarcinoma | 9.07e-18 | 2 |
lung cancer | 8.85e-10 | 15 |
respiratory system cancer | 3.14e-09 | 16 |
carcinoma | 3.15e-08 | 106 |
non-small cell lung carcinoma | 6.55e-08 | 5 |
female reproductive endometrioid cancer | 9.49e-07 | 6 |