FFCP PHASE1:Hg19::chr21:44345714..44345723,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_uc002zco.2_5end | |association_with_transcript=7bp_to_uc002zco.2_5end | ||
|cluster_id=chr21:44345714..44345723,- | |||
|coexpression_cluster_id=C925 | |coexpression_cluster_id=C925 | ||
|description=CAGE_peak_2_at_uc002zco.2_5end | |description=CAGE_peak_2_at_uc002zco.2_5end | ||
|id=chr21:44345714..44345723,- | |id=chr21:44345714..44345723,- | ||
|ontology_enrichment_celltype=CL:0000039!7.88e-31!7;CL:0000586!7.88e-31!7;CL:0002322!1.08e-21!5;CL:0002541!1.40e-13!3 | |ontology_enrichment_celltype=CL:0000039!7.88e-31!7;CL:0000586!7.88e-31!7;CL:0002322!1.08e-21!5;CL:0002541!1.40e-13!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.89e-67;7!CL:0000586;3.89e-67;7!CL:0002322;1.25e-46;5!CL:0002321;1.47e-15;15!CL:0002541;1.70e-13;3!CL:0000148;5.78e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.29e-67,7;CL:0000586,4.29e-67,7;CL:0002322,1.51e-46,5;CL:0002541,1.60e-13,3;CL:0000148,5.94e-09,10;CL:0000541,5.94e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.75e-16;10!UBERON:0005564;7.75e-16;10!UBERON:0003124;4.15e-11;1 | |||
|ontology_enrichment_disease=DOID:3095!1.11e-17!22;DOID:2994!1.11e-17!22 | |ontology_enrichment_disease=DOID:3095!1.11e-17!22;DOID:2994!1.11e-17!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.67e-21;22!DOID:2994;5.67e-21;22!DOID:1799;2.79e-11;1!DOID:10165;2.79e-11;1!DOID:1798;2.79e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.84e-21,22;DOID:2994,5.84e-21,22;DOID:1799,2.79e-11,1;DOID:10165,2.79e-11,1;DOID:1798,2.79e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.40e-13!3;UBERON:0000920!1.40e-13!3;UBERON:0003124!3.68e-10!7;UBERON:0000473!3.38e-09!8;UBERON:0005631!1.97e-07!14;UBERON:0000158!1.97e-07!14 | |ontology_enrichment_uberon=UBERON:0000476!1.40e-13!3;UBERON:0000920!1.40e-13!3;UBERON:0003124!3.68e-10!7;UBERON:0000473!3.38e-09!8;UBERON:0005631!1.97e-07!14;UBERON:0000158!1.97e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.91e-20;8!UBERON:0003135;2.03e-14;11!UBERON:0003124;1.70e-13;3!UBERON:0000920;1.70e-13;3!UBERON:0000922;2.21e-09;49!UBERON:0000991;1.24e-07;21!UBERON:0003101;2.73e-07;22!UBERON:0000079;2.73e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.04e-19,8;UBERON:0003135,2.10e-14,11;UBERON:0000920,1.60e-13,3;UBERON:0003124,7.77e-13,7;UBERON:0000991,1.26e-07,21;UBERON:0009196,1.26e-07,21;UBERON:0009117,1.26e-07,21;UBERON:0005564,1.26e-07,21;UBERON:0004176,2.77e-07,22;UBERON:0003101,2.77e-07,22;UBERON:0000079,2.77e-07,22 | |||
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| ||
|short_description=p2@uc002zco.2 | |short_description=p2@uc002zco.2 | ||
}} | }} |
Latest revision as of 18:14, 28 July 2015
Short description: | p2@uc002zco.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc002zco.2_5end |
Coexpression cluster: | C925_testicular_pancreatic_choriocarcinoma_placenta_H9_chorionic_hepatoblastoma |
Association with transcript: | 7bp_to_uc002zco.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.29e-67 | 7 |
germ cell | 4.29e-67 | 7 |
embryonic stem cell | 1.51e-46 | 5 |
chorionic membrane mesenchymal stem cell | 1.60e-13 | 3 |
melanocyte | 5.94e-09 | 10 |
melanoblast | 5.94e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 1.04e-19 | 8 |
male reproductive organ | 2.10e-14 | 11 |
egg chorion | 1.60e-13 | 3 |
chorion | 7.77e-13 | 7 |
gonad | 1.26e-07 | 21 |
indifferent external genitalia | 1.26e-07 | 21 |
indifferent gonad | 1.26e-07 | 21 |
gonad primordium | 1.26e-07 | 21 |
external genitalia | 2.77e-07 | 22 |
male organism | 2.77e-07 | 22 |
male reproductive system | 2.77e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.84e-21 | 22 |
germ cell cancer | 5.84e-21 | 22 |
islet cell tumor | 2.79e-11 | 1 |
endocrine pancreas cancer | 2.79e-11 | 1 |
pancreatic endocrine carcinoma | 2.79e-11 | 1 |