FFCP PHASE1:Hg19::chr22:44377278..44377303,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:44377278..44377303,+ | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_at_chr22:44377278..44377303,+ | |description=CAGE_peak_at_chr22:44377278..44377303,+ | ||
|id=chr22:44377278..44377303,+ | |id=chr22:44377278..44377303,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.81e-40;1!CL:0002625;1.81e-40;1!CL:0000216;1.81e-40;1!CL:0002535;3.11e-21;2!CL:0000307;1.71e-14;3!CL:0002595;3.10e-09;5!CL:0000154;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,9.91e-41,1;CL:0002625,9.91e-41,1;CL:0000216,9.91e-41,1;CL:0002535,3.11e-21,2;CL:0000068,2.09e-14,3;CL:0000069,2.09e-14,3;CL:0000307,2.09e-14,3;CL:0000377,2.09e-14,3;CL:0002595,2.97e-09,5;CL:0000154,5.92e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000377;1.71e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;2.53e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.53e-09,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.81e-40;1!UBERON:0001343;1.81e-40;1!UBERON:0004910;1.81e-40;1!UBERON:0004813;1.81e-40;1!UBERON:0006955;3.11e-21;2!UBERON:0004801;3.11e-21;2!UBERON:0004909;5.15e-21;2!UBERON:0005904;3.26e-11;4!UBERON:0003834;3.10e-09;5!UBERON:0001533;3.10e-09;5!UBERON:0000002;5.54e-08;6!UBERON:0001560;5.54e-08;6!UBERON:0003126;5.86e-07;7!UBERON:0001871;5.86e-07;6!UBERON:0001005;5.86e-07;7!UBERON:0003513;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,9.91e-41,1;UBERON:0001343,9.91e-41,1;UBERON:0004910,9.91e-41,1;UBERON:0005154,9.91e-41,1;UBERON:0005295,9.91e-41,1;UBERON:0004813,9.91e-41,1;UBERON:0005297,9.91e-41,1;UBERON:0005294,9.91e-41,1;UBERON:0010141,9.91e-41,1;UBERON:0005891,9.91e-41,1;UBERON:0006955,3.11e-21,2;UBERON:0004801,3.11e-21,2;UBERON:0004909,3.81e-21,2;UBERON:0005904,2.80e-11,4;UBERON:0003834,2.97e-09,5;UBERON:0001533,2.97e-09,5;UBERON:0000002,5.54e-08,6;UBERON:0001560,5.54e-08,6;UBERON:0003513,5.70e-07,7;UBERON:0001871,6.04e-07,6;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
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| ||
|short_description=p@chr22:44377278..44377303,+ | |short_description=p@chr22:44377278..44377303,+ | ||
}} | }} |
Latest revision as of 21:56, 28 July 2015
Short description: | p@chr22:44377278..44377303, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:44377278..44377303, + |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 9.91e-41 | 1 |
seminiferous tubule epithelial cell | 9.91e-41 | 1 |
Sertoli cell | 9.91e-41 | 1 |
epithelial cell of cervix | 3.11e-21 | 2 |
duct epithelial cell | 2.09e-14 | 3 |
branched duct epithelial cell | 2.09e-14 | 3 |
tracheal epithelial cell | 2.09e-14 | 3 |
tracheoblast | 2.09e-14 | 3 |
smooth muscle cell of the subclavian artery | 2.97e-09 | 5 |
protein secreting cell | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 9.91e-41 | 1 |
seminiferous tubule of testis | 9.91e-41 | 1 |
epithelium of male gonad | 9.91e-41 | 1 |
epithelial cord | 9.91e-41 | 1 |
sex cord | 9.91e-41 | 1 |
seminiferous tubule epithelium | 9.91e-41 | 1 |
testis sex cord | 9.91e-41 | 1 |
genital ridge | 9.91e-41 | 1 |
primitive sex cord of indifferent gonad | 9.91e-41 | 1 |
coelomic epithelium | 9.91e-41 | 1 |
uterine epithelium | 3.11e-21 | 2 |
cervix epithelium | 3.11e-21 | 2 |
epithelium of gonad | 3.81e-21 | 2 |
duct of male reproductive system | 2.80e-11 | 4 |
thoracic segment blood vessel | 2.97e-09 | 5 |
subclavian artery | 2.97e-09 | 5 |
uterine cervix | 5.54e-08 | 6 |
neck of organ | 5.54e-08 | 6 |
trunk blood vessel | 5.70e-07 | 7 |
temporal lobe | 6.04e-07 | 6 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.53e-09 | 5 |