FFCP PHASE1:Hg19::chr2:10101444..10101453,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29841 | |EntrezGene=29841 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17923 | |HGNC=17923 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=351bp_to_ENST00000494520_5end | |association_with_transcript=351bp_to_ENST00000494520_5end | ||
|cluster_id=chr2:10101444..10101453,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_9_at_GRHL1_5end | |description=CAGE_peak_9_at_GRHL1_5end | ||
|id=chr2:10101444..10101453,+ | |id=chr2:10101444..10101453,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.97e-18!5;CL:0000457!1.97e-18!5;CL:0002191!1.97e-18!5;CL:0000097!1.97e-18!5;CL:0000831!1.97e-18!5;CL:0002028!1.97e-18!5;CL:1001319!1.10e-10!1;CL:1000600!1.10e-10!1;CL:0000163!1.73e-10!9 | |ontology_enrichment_celltype=CL:0002274!1.97e-18!5;CL:0000457!1.97e-18!5;CL:0002191!1.97e-18!5;CL:0000097!1.97e-18!5;CL:0000831!1.97e-18!5;CL:0002028!1.97e-18!5;CL:1001319!1.10e-10!1;CL:1000600!1.10e-10!1;CL:0000163!1.73e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;7.76e-118;5!CL:0000163;3.75e-66;9!CL:0000151;1.61e-17;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.76e-118,5;CL:0002028,7.76e-118,5;CL:0000163,3.75e-66,9;CL:0000151,1.62e-17,36;CL:0000839,6.35e-10,66;CL:0000557,8.58e-10,67;CL:0000766,3.42e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001255!9.60e-20!2;UBERON:0001556!9.60e-20!2;UBERON:0007029!3.76e-11!1;UBERON:0003112!4.58e-11!1;UBERON:0000032!4.58e-11!1;UBERON:0005253!4.58e-11!1;UBERON:0003128!4.58e-11!1;UBERON:0002241!4.58e-11!1;UBERON:0001703!4.58e-11!1;UBERON:0004761!4.58e-11!1;UBERON:0009617!4.58e-11!1;UBERON:0002038!6.14e-11!1;UBERON:0009661!6.14e-11!1;UBERON:0004645!1.10e-10!1;UBERON:0001256!1.10e-10!1;UBERON:0001259!1.10e-10!1;UBERON:0002902!1.21e-10!1;UBERON:0009899!1.21e-10!1;UBERON:0007190!1.33e-10!1;UBERON:0002372!1.46e-10!1;UBERON:0001961!1.46e-10!1;UBERON:0001744!1.46e-10!1;UBERON:0001735!1.46e-10!1;UBERON:0001882!1.61e-10!1;UBERON:0005403!1.61e-10!1;UBERON:0002022!1.77e-10!1;UBERON:0001893!3.51e-09!34;UBERON:0002780!1.41e-07!41;UBERON:0001890!1.41e-07!41;UBERON:0006240!1.41e-07!41;UBERON:0003080!2.16e-07!42;UBERON:0001869!6.44e-07!32;UBERON:0002791!9.39e-07!33 | |ontology_enrichment_uberon=UBERON:0001255!9.60e-20!2;UBERON:0001556!9.60e-20!2;UBERON:0007029!3.76e-11!1;UBERON:0003112!4.58e-11!1;UBERON:0000032!4.58e-11!1;UBERON:0005253!4.58e-11!1;UBERON:0003128!4.58e-11!1;UBERON:0002241!4.58e-11!1;UBERON:0001703!4.58e-11!1;UBERON:0004761!4.58e-11!1;UBERON:0009617!4.58e-11!1;UBERON:0002038!6.14e-11!1;UBERON:0009661!6.14e-11!1;UBERON:0004645!1.10e-10!1;UBERON:0001256!1.10e-10!1;UBERON:0001259!1.10e-10!1;UBERON:0002902!1.21e-10!1;UBERON:0009899!1.21e-10!1;UBERON:0007190!1.33e-10!1;UBERON:0002372!1.46e-10!1;UBERON:0001961!1.46e-10!1;UBERON:0001744!1.46e-10!1;UBERON:0001735!1.46e-10!1;UBERON:0001882!1.61e-10!1;UBERON:0005403!1.61e-10!1;UBERON:0002022!1.77e-10!1;UBERON:0001893!3.51e-09!34;UBERON:0002780!1.41e-07!41;UBERON:0001890!1.41e-07!41;UBERON:0006240!1.41e-07!41;UBERON:0003080!2.16e-07!42;UBERON:0001869!6.44e-07!32;UBERON:0002791!9.39e-07!33 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.08e-09,76;UBERON:0001474,3.31e-08,82;UBERON:0004765,1.43e-07,90;UBERON:0002405,2.32e-07,93;UBERON:0002390,4.88e-07,98;UBERON:0003061,4.88e-07,98;UBERON:0001434,6.45e-07,100 | |||
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|short_description=p9@GRHL1 | |short_description=p9@GRHL1 | ||
}} | }} |
Latest revision as of 23:06, 15 September 2015
Short description: | p9@GRHL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GRHL1_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 351bp_to_ENST00000494520_5end |
EntrezGene: | GRHL1 |
HGNC: | 17923 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.76e-118 | 5 |
basophil mast progenitor cell | 7.76e-118 | 5 |
endocrine cell | 3.75e-66 | 9 |
secretory cell | 1.62e-17 | 36 |
myeloid lineage restricted progenitor cell | 6.35e-10 | 66 |
granulocyte monocyte progenitor cell | 8.58e-10 | 67 |
myeloid leukocyte | 3.42e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.08e-09 | 76 |
bone element | 3.31e-08 | 82 |
skeletal element | 1.43e-07 | 90 |
immune system | 2.32e-07 | 93 |
hematopoietic system | 4.88e-07 | 98 |
blood island | 4.88e-07 | 98 |
skeletal system | 6.45e-07 | 100 |