FFCP PHASE1:Hg19::chr2:216261849..216261862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216261849..216261862,+ | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_at_chr2:216261849..216261862,+ | |description=CAGE_peak_at_chr2:216261849..216261862,+ | ||
|id=chr2:216261849..216261862,+ | |id=chr2:216261849..216261862,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.23e-20!180;CL:0000057!2.37e-19!75;CL:0002371!9.62e-17!591;CL:0000144!3.86e-15!625;CL:0000723!5.07e-12!436;CL:0000048!5.49e-12!430;CL:0000034!2.01e-11!444;CL:0002620!7.72e-11!23;CL:0000548!1.30e-10!679;CL:0000004!1.30e-10!679;CL:0000255!1.30e-10!679;CL:0000012!2.68e-10!682;CL:0000183!8.74e-08!59;CL:0002320!1.36e-07!365;CL:0000187!2.08e-07!54;CL:0002334!2.23e-07!12;CL:0000680!2.39e-07!57;CL:0000056!2.39e-07!57;CL:0000355!2.39e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.23e-20!180;CL:0000057!2.37e-19!75;CL:0002371!9.62e-17!591;CL:0000144!3.86e-15!625;CL:0000723!5.07e-12!436;CL:0000048!5.49e-12!430;CL:0000034!2.01e-11!444;CL:0002620!7.72e-11!23;CL:0000548!1.30e-10!679;CL:0000004!1.30e-10!679;CL:0000255!1.30e-10!679;CL:0000012!2.68e-10!682;CL:0000183!8.74e-08!59;CL:0002320!1.36e-07!365;CL:0000187!2.08e-07!54;CL:0002334!2.23e-07!12;CL:0000680!2.39e-07!57;CL:0000056!2.39e-07!57;CL:0000355!2.39e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002540;3.82e-09;6!CL:0000188;2.25e-08;9!CL:0002570;3.62e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.70e-10,76;CL:0002540,4.91e-09,6;CL:0000188,3.79e-08,9;CL:0000048,2.42e-07,427;CL:0002570,2.70e-07,8;CL:0000723,4.87e-07,433;CL:0002334,8.20e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!3.54e-10!45;UBERON:0002416!3.54e-10!45;UBERON:0000914!1.89e-09!83;UBERON:0002329!1.89e-09!83;UBERON:0003077!1.89e-09!83;UBERON:0003059!1.89e-09!83;UBERON:0007282!1.89e-09!83;UBERON:0009618!1.89e-09!83;UBERON:0007285!1.89e-09!83;UBERON:0002097!2.97e-08!40;UBERON:0005256!4.73e-08!143;UBERON:0004290!6.58e-08!70;UBERON:0002384!1.02e-07!375;UBERON:0003102!1.33e-07!95;UBERON:0000486!2.03e-07!82 | |ontology_enrichment_uberon=UBERON:0002199!3.54e-10!45;UBERON:0002416!3.54e-10!45;UBERON:0000914!1.89e-09!83;UBERON:0002329!1.89e-09!83;UBERON:0003077!1.89e-09!83;UBERON:0003059!1.89e-09!83;UBERON:0007282!1.89e-09!83;UBERON:0009618!1.89e-09!83;UBERON:0007285!1.89e-09!83;UBERON:0002097!2.97e-08!40;UBERON:0005256!4.73e-08!143;UBERON:0004290!6.58e-08!70;UBERON:0002384!1.02e-07!375;UBERON:0003102!1.33e-07!95;UBERON:0000486!2.03e-07!82 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.54e-07,46;UBERON:0002416,1.54e-07,46;UBERON:0002384,5.96e-07,371 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.845726424575827,2.00146596706261,0.893922188854576,0.872338524100369,5.06599756336621,0,0.261185628199839,0,0,1.09220686065086,0.527533956456907,0.37129905888014,1.32558950291166,0.672325146451775,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.66221330396589,1.0843174571537,0,1.88300474649071,0,4.86634870302636,0.0945348171640679,0,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51699661725944,0.550236083880135,0,0,0.35576626268671,0,0,0,0.24406205754817,0,1.62028389576352,0,0,0,0,0,0.183201743930407,0,0,0,4.47274756525787,0.759783069987479,1.85372853138506,4.30254931123221,1.06400514659507,0,0,4.68668341992604,0,0.538842688278752,0.653847612453835,0.908144565869588,1.15235184896,0,6.24320153660641,0,3.13842229158782,0.352303495931295,0.485618833104395,0.280901613404497,0.204154171254893,0.859840221182376,0.103325781175765,0,0.247266929278557,0,1.43723628363248,0.168336113954066,0,0,0,0.612975591598039,0.45071417671979,0.453728732640084,1.79389635688862,0.427114777637135,2.7551147150743,2.70081986475962,0.412210116953756,4.3798891807757,0.37223371266318,0.843881661206331,0.68205903612839,4.03894038790583,0.736399189138395,0.484938170456436,4.26011511019937,0.403008392910561,0,0,0.272746120590835,0,0,0,0.348581828608555,0,0,0,0,0.643240938192885,0,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,1.26755034821831,0,0,0,0,0,0.658501712451753,0,0.100528972411631,0,0,0,0,0,0.352226082707465,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0,2.5971971583826,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.308482478109971,0,0,0,0.43596006883328,0.36669142910475,0.258543431515556,0,2.535908257668,0.531876233169741,0,1.02882949704857,0,1.0656887160644,0.142977993658148,1.08524321078289,0.823240336780769,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0.958499421966331,0,0,0,1.64381058040307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,4.00136416847742,1.35632511849868,6.23912584592421,10.3488813502354,3.78485796081443,0.937131319941706,0,0,1.03473071292505,1.32845119707087,0.184369168541703,1.12948698808508,0,0.686286847621712,0,0,0,0,0,1.81434175997808,0.744323423456331,2.76231551918512,3.92924132206303,0.768834895534206,0,1.76939313257968,0,1.69630663182921,2.66342587969691,0.657017248110473,0.519254429183621,1.39452454151951,0.120859449591622,1.40354529212299,0,0.114814448164607,0,0.917870904715969,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,1.6068392984416,1.35339005608971,1.07834031980251,1.68854042198743,0.964856007391714,1.18162269355101,1.30515024522806,0.511359764496605,1.24644849905432,0.330569830721956,0.960950336825531,0.510450849978337,0.30347334256665,0.464845549297286,7.870308670766,0,0.308033580176089,0,0,0.18532421910392,0,0,0.632758849437452,0.571890581771475,0.255897791311334,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0,0,0.409499734223957,0.848432591722276,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0.563391205064483,0.430234056612155,1.17898849215745,0,0,0.422215270595328,4.93942339439853,0,0,0,0,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,3.00533503561846,0,0,0.597743964753209,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,3.50901275705111,0.0915975934018623,14.3919389525031,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0.236349546921671,0.659326867049332,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63293680054705,0,0,1.19271615249795,0,0.146552233678082,1.32506888912221,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,1.94031243752936,2.80455971816669,0.554805861502613,1.32582103692562,1.76097531226803,1.77962244319307,1.83072054717539,2.11723293268535,0.310874401165561,0.443565449968902,0.318593534327405,0.449803112163605,0.310525913752519,0.414706207840855,1.06336685823198,0.521745061811734,0.150257608997218,0,0,1.27294061441792,0.966695013382396,0.464033759878494,1.19428766609585,0.400027764663154,1.71697852591396,1.01024846629776,0,0,0,0,0,0,0.489473409012935,0.358177682162975,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0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| ||
|short_description=p@chr2:216261849..216261862,+ | |short_description=p@chr2:216261849..216261862,+ | ||
}} | }} |
Latest revision as of 06:08, 29 July 2015
Short description: | p@chr2:216261849..216261862, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216261849..216261862, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.70e-10 | 76 |
mesenchymal stem cell of the bone marrow | 4.91e-09 | 6 |
cell of skeletal muscle | 3.79e-08 | 9 |
multi fate stem cell | 2.42e-07 | 427 |
mesenchymal stem cell of adipose | 2.70e-07 | 8 |
somatic stem cell | 4.87e-07 | 433 |
preadipocyte | 8.20e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
integument | 1.54e-07 | 46 |
integumental system | 1.54e-07 | 46 |
connective tissue | 5.96e-07 | 371 |