FFCP PHASE1:Hg19::chr2:216270982..216270997,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216270982..216270997,+ | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_at_chr2:216270982..216270997,+ | |description=CAGE_peak_at_chr2:216270982..216270997,+ | ||
|id=chr2:216270982..216270997,+ | |id=chr2:216270982..216270997,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.70e-25!180;CL:0000057!2.75e-22!75;CL:0002371!7.28e-16!591;CL:0000144!2.64e-14!625;CL:0000048!2.44e-12!430;CL:0000723!6.15e-12!436;CL:0000680!2.86e-11!57;CL:0000056!2.86e-11!57;CL:0000355!2.86e-11!57;CL:0000183!5.05e-11!59;CL:0000548!6.09e-11!679;CL:0000004!6.09e-11!679;CL:0000255!6.09e-11!679;CL:0000034!6.13e-11!444;CL:0000187!1.07e-10!54;CL:0002334!1.18e-10!12;CL:0000012!1.32e-10!682;CL:0002620!1.50e-10!23;CL:0000393!1.52e-08!60;CL:0000211!1.52e-08!60;CL:0002320!5.83e-07!365 | |ontology_enrichment_celltype=CL:0000055!2.70e-25!180;CL:0000057!2.75e-22!75;CL:0002371!7.28e-16!591;CL:0000144!2.64e-14!625;CL:0000048!2.44e-12!430;CL:0000723!6.15e-12!436;CL:0000680!2.86e-11!57;CL:0000056!2.86e-11!57;CL:0000355!2.86e-11!57;CL:0000183!5.05e-11!59;CL:0000548!6.09e-11!679;CL:0000004!6.09e-11!679;CL:0000255!6.09e-11!679;CL:0000034!6.13e-11!444;CL:0000187!1.07e-10!54;CL:0002334!1.18e-10!12;CL:0000012!1.32e-10!682;CL:0002620!1.50e-10!23;CL:0000393!1.52e-08!60;CL:0000211!1.52e-08!60;CL:0002320!5.83e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.69e-13;12!CL:0000746;9.21e-08;3!CL:0002620;9.54e-08;23!CL:0002580;1.10e-07;3!CL:0000134;5.65e-07;55!CL:0002570;7.41e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.56e-17,76;CL:0002334,2.74e-13,12;CL:0000048,1.26e-11,427;CL:0000723,3.28e-11,433;CL:0000034,1.12e-10,441;CL:0002320,1.48e-08,361;CL:0000134,6.70e-08,354;CL:0000746,7.18e-08,3;CL:0000513,7.18e-08,3;CL:0002580,8.23e-08,3;CL:0002620,8.74e-08,23;CL:0002570,8.24e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000513;9.21e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.46e-13!83;UBERON:0002329!6.46e-13!83;UBERON:0003077!6.46e-13!83;UBERON:0003059!6.46e-13!83;UBERON:0007282!6.46e-13!83;UBERON:0009618!6.46e-13!83;UBERON:0007285!6.46e-13!83;UBERON:0000486!9.71e-12!82;UBERON:0004290!1.24e-11!70;UBERON:0005256!1.31e-10!143;UBERON:0001134!9.19e-10!61;UBERON:0002036!9.19e-10!61;UBERON:0003082!9.19e-10!61;UBERON:0004872!3.00e-09!84;UBERON:0002385!4.28e-09!63;UBERON:0001015!4.28e-09!63;UBERON:0000383!4.28e-09!63;UBERON:0000490!1.18e-07!138;UBERON:0002384!2.30e-07!375;UBERON:0002199!2.79e-07!45;UBERON:0002416!2.79e-07!45;UBERON:0003102!3.76e-07!95;UBERON:0004923!7.06e-07!57;UBERON:0002100!9.45e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!6.46e-13!83;UBERON:0002329!6.46e-13!83;UBERON:0003077!6.46e-13!83;UBERON:0003059!6.46e-13!83;UBERON:0007282!6.46e-13!83;UBERON:0009618!6.46e-13!83;UBERON:0007285!6.46e-13!83;UBERON:0000486!9.71e-12!82;UBERON:0004290!1.24e-11!70;UBERON:0005256!1.31e-10!143;UBERON:0001134!9.19e-10!61;UBERON:0002036!9.19e-10!61;UBERON:0003082!9.19e-10!61;UBERON:0004872!3.00e-09!84;UBERON:0002385!4.28e-09!63;UBERON:0001015!4.28e-09!63;UBERON:0000383!4.28e-09!63;UBERON:0000490!1.18e-07!138;UBERON:0002384!2.30e-07!375;UBERON:0002199!2.79e-07!45;UBERON:0002416!2.79e-07!45;UBERON:0003102!3.76e-07!95;UBERON:0004923!7.06e-07!57;UBERON:0002100!9.45e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.27e-08;6!UBERON:0002358;1.27e-08;6!UBERON:0003684;1.27e-08;6!UBERON:0001178;1.27e-08;6!UBERON:0004457;7.99e-08;9!UBERON:0000042;7.99e-08;9!UBERON:0001013;3.31e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.42e-09,371;UBERON:0002199,1.68e-08,46;UBERON:0002416,1.68e-08,46;UBERON:0003688,2.78e-08,6;UBERON:0002358,2.78e-08,6;UBERON:0003684,2.78e-08,6;UBERON:0001178,2.78e-08,6;UBERON:0002097,1.64e-07,41;UBERON:0001013,3.60e-07,14 | |||
|phase1_expression=1.63510541343501,2.14100523890983,0.845726424575827,1.0007329835313,2.23480547213644,3.48935409640147,0,0.631719873426831,0,0,0,0.218441372130172,0.527533956456907,0.495065411840187,0.331397375727916,0.672325146451775,0.602694528023977,0,0.975865597581014,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,3.35350429851818,1.53435074212236,0.361439152384566,0.50133791063589,0.144846518960824,0,12.6525066278685,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,3.24056779152704,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,3.47880366186723,0.886413581652058,3.97227542439656,5.73673241497627,0.709336764396714,0,0,2.22000793575444,0.933633106199299,1.61652806483626,1.14423332179421,0.908144565869588,1.15235184896,0,1.87296046098192,0,3.28787097213962,0.23486899728753,0.809364721840658,0.561803226808994,0.61246251376468,0.368502951935304,0.103325781175765,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0.500474079487857,0,0,1.5324389789951,0.300476117813194,1.02088964844019,1.4351170855109,0,2.11931901159562,4.20127534518163,0.515262646192195,4.63752972082133,0.558350568994769,1.18143432568886,0.876933046450788,2.52433774244115,1.01254888506529,0.80823028409406,1.77504796258307,0.403008392910561,0.508681776931463,0,0.545492241181669,0,0,0,0,0,0,0,0,2.57296375277154,0,6.50115099244771,2.88751792667834,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0,0,0,0,0,0,0.469634776943287,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.503946384596579,0,1.79117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0.5867062865676,0.387815147273333,0,2.535908257668,0,0,1.02882949704857,0,0.266422179016099,0.714889968290738,0.542621605391443,0,1.30294473717494,0.355391948742546,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,0,0.434343920002738,1.84928690295345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,4.50153468953709,1.35632511849868,4.57535895367776,3.21172179834891,2.05013139544115,0.937131319941706,0.300946099727719,0,0,1.99267679560631,1.10621501125022,0.434418072340414,0.195801157462741,0.686286847621712,0,0,0,0.303127571446259,0,0.907170879989041,1.48864684691266,3.6830873589135,3.64858122762996,1.40953064181271,1.02341449813341,1.28683136914886,4.45254199334973,1.07946785661859,2.13074070375753,0.657017248110473,0.519254429183621,0.929683027679674,0.120859449591622,2.20557117333613,0,0.114814448164607,0.182091168006717,0.524497659837696,0,0.385076685522074,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,1.6068392984416,0.870036464629098,1.54048617114644,0.767518373630648,1.10269257987624,0.859361958946189,1.59518363305651,0.596586391912706,1.33548053470106,0.495854746082934,0.192190067365106,0.382838137483752,0.2023155617111,0,2.83331112147576,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0,0.372158369359667,1.58189712359363,0.571890581771475,0,1.71175595213568,0.318203247925937,0,0.359744915166629,0.54907405947211,0.235624804691373,0,0,0,0,1.21856744815642,0,0.136499911407986,0.565621727814851,0,0,1.32687795048244,0.876901770507525,1.15755106853338,0.655894752046633,0.202910376962704,0,0.281695602532241,1.00387946542836,0.88424136911809,0,0,0.633322905892992,1.64647446479951,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.71623345421307,0,0,0,0,2.67140892054974,0,0,0.996239941255349,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,5.74202087517455,0.641183153813036,10.1276607443541,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0,2.16179930125442,0,0.551482276150566,0.247247575143499,0.337017719270924,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.895528817321244,3.03827302801392,1.10961172300523,2.08343305802598,2.26411111577318,0.889811221596536,0.915360273587694,2.26846385644859,0.466311601748341,0.295710299979268,0.318593534327405,1.79921244865442,0.621051827505038,1.24411862352257,1.32920857278997,2.08698024724694,0.300515217994437,0,0,0.363697318405119,0.537052785212442,0.928067519756987,1.19428766609585,0.400027764663154,2.74716564146234,0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| ||
|short_description=p@chr2:216270982..216270997,+ | |short_description=p@chr2:216270982..216270997,+ | ||
}} | }} |
Latest revision as of 06:09, 29 July 2015
Short description: | p@chr2:216270982..216270997, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216270982..216270997, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.56e-17 | 76 |
preadipocyte | 2.74e-13 | 12 |
multi fate stem cell | 1.26e-11 | 427 |
somatic stem cell | 3.28e-11 | 433 |
stem cell | 1.12e-10 | 441 |
connective tissue cell | 1.48e-08 | 361 |
mesenchymal cell | 6.70e-08 | 354 |
cardiac muscle cell | 7.18e-08 | 3 |
cardiac muscle myoblast | 7.18e-08 | 3 |
preadipocyte of the breast | 8.23e-08 | 3 |
skin fibroblast | 8.74e-08 | 23 |
mesenchymal stem cell of adipose | 8.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.42e-09 | 371 |
integument | 1.68e-08 | 46 |
integumental system | 1.68e-08 | 46 |
omentum | 2.78e-08 | 6 |
peritoneum | 2.78e-08 | 6 |
abdominal cavity | 2.78e-08 | 6 |
visceral peritoneum | 2.78e-08 | 6 |
skin of body | 1.64e-07 | 41 |
adipose tissue | 3.60e-07 | 14 |