FFCP PHASE1:Hg19::chr3:123331868..123331898,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4638 | |EntrezGene=4638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7590 | |HGNC=7590 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=199bp_to_BC015838_5end | |association_with_transcript=199bp_to_BC015838_5end | ||
|cluster_id=chr3:123331868..123331898,- | |||
|coexpression_cluster_id=C3651 | |coexpression_cluster_id=C3651 | ||
|description=CAGE_peak_30_at_MYLK_5end | |description=CAGE_peak_30_at_MYLK_5end | ||
|id=chr3:123331868..123331898,- | |id=chr3:123331868..123331898,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.53e-11;2!UBERON:0005795;2.17e-08;10!UBERON:0006603;2.82e-07;65!UBERON:0009143;7.97e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.11e-07;3!DOID:127;1.11e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.65e-08,3;DOID:127,7.65e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.81e-14!115;UBERON:0001007!8.72e-10!155;UBERON:0001555!8.72e-10!155;UBERON:0007026!8.72e-10!155;UBERON:0000475!5.29e-09!365;UBERON:0000062!1.70e-08!511;UBERON:0004119!3.03e-08!169;UBERON:0000925!3.03e-08!169;UBERON:0006595!3.03e-08!169;UBERON:0004921!4.27e-08!129;UBERON:0004185!4.27e-08!129 | |ontology_enrichment_uberon=UBERON:0007023!8.81e-14!115;UBERON:0001007!8.72e-10!155;UBERON:0001555!8.72e-10!155;UBERON:0007026!8.72e-10!155;UBERON:0000475!5.29e-09!365;UBERON:0000062!1.70e-08!511;UBERON:0004119!3.03e-08!169;UBERON:0000925!3.03e-08!169;UBERON:0006595!3.03e-08!169;UBERON:0004921!4.27e-08!129;UBERON:0004185!4.27e-08!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;9.39e-17;3!UBERON:0004054;9.39e-17;3!UBERON:0004175;1.55e-14;21!UBERON:0000160;2.00e-13;17!UBERON:0005409;2.50e-13;22!UBERON:0005904;1.08e-12;4!UBERON:0003135;6.90e-12;11!UBERON:0004921;7.25e-11;33!UBERON:0003101;7.29e-11;22!UBERON:0000079;7.29e-11;22!UBERON:0000059;4.96e-08;11!UBERON:0003133;3.36e-07;44!UBERON:0001000;6.39e-07;1!UBERON:0005352;6.39e-07;1!UBERON:0001301;7.97e-07;1!UBERON:0003975;7.99e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.05e-17,3;UBERON:0004054,8.05e-17,3;UBERON:0000160,1.79e-13,17;UBERON:0005904,9.63e-13,4;UBERON:0007023,2.59e-12,114;UBERON:0004175,3.09e-12,25;UBERON:0003135,5.20e-12,11;UBERON:0005409,1.07e-11,25;UBERON:0003101,5.53e-11,22;UBERON:0000079,5.53e-11,22;UBERON:0005156,2.21e-10,59;UBERON:0000990,2.21e-10,59;UBERON:0003133,4.13e-09,48;UBERON:0003064,1.99e-08,28;UBERON:0000059,4.07e-08,11;UBERON:0004921,9.15e-08,118;UBERON:0001000,6.23e-07,1;UBERON:0005352,6.23e-07,1;UBERON:0001046,7.88e-07,19;UBERON:0001301,9.15e-07,1;UBERON:0000989,9.67e-07,1;UBERON:0008811,9.67e-07,1;UBERON:0006258,9.67e-07,1;UBERON:0005876,9.67e-07,1;UBERON:0004874,9.67e-07,1 | |||
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| ||
|short_description=p30@MYLK | |short_description=p30@MYLK | ||
}} | }} |
Latest revision as of 01:13, 20 September 2015
Short description: | p30@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_MYLK_5end |
Coexpression cluster: | C3651_ductus_colon_smooth_stomach_bladder_esophagus_penis |
Association with transcript: | 199bp_to_BC015838_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.05e-17 | 3 |
internal male genitalia | 8.05e-17 | 3 |
intestine | 1.79e-13 | 17 |
duct of male reproductive system | 9.63e-13 | 4 |
adult organism | 2.59e-12 | 114 |
internal genitalia | 3.09e-12 | 25 |
male reproductive organ | 5.20e-12 | 11 |
gastrointestinal system | 1.07e-11 | 25 |
male organism | 5.53e-11 | 22 |
male reproductive system | 5.53e-11 | 22 |
reproductive structure | 2.21e-10 | 59 |
reproductive system | 2.21e-10 | 59 |
reproductive organ | 4.13e-09 | 48 |
intermediate mesoderm | 1.99e-08 | 28 |
large intestine | 4.07e-08 | 11 |
subdivision of digestive tract | 9.15e-08 | 118 |
vas deferens | 6.23e-07 | 1 |
spermatic cord | 6.23e-07 | 1 |
hindgut | 7.88e-07 | 19 |
epididymis | 9.15e-07 | 1 |
penis | 9.67e-07 | 1 |
intromittent organ | 9.67e-07 | 1 |
lateral plate mesenchyme | 9.67e-07 | 1 |
undifferentiated genital tubercle | 9.67e-07 | 1 |
somatopleure | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.65e-08 | 3 |
leiomyoma | 7.65e-08 | 3 |