FFCP PHASE1:Hg19::chr5:56589068..56589074,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:56589068..56589074,- | |||
|coexpression_cluster_id=C225 | |coexpression_cluster_id=C225 | ||
|description=CAGE_peak_at_chr5:56589068..56589074,- | |description=CAGE_peak_at_chr5:56589068..56589074,- | ||
|id=chr5:56589068..56589074,- | |id=chr5:56589068..56589074,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;4.83e-30;3!CL:0000047;2.74e-12;2!CL:0000148;9.65e-10;10!CL:0000322;9.66e-09;3!CL:0000147;3.23e-07;14!CL:0000083;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,4.84e-30,3;CL:0000047,5.83e-12,8;CL:0000148,9.65e-10,10;CL:0000541,9.65e-10,10;CL:0000322,9.66e-09,3;CL:0000147,3.24e-07,14;CL:0000083,6.50e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!2.81e-09!2;DOID:0050687!9.93e-07!143 | |ontology_enrichment_disease=DOID:1909!2.81e-09!2;DOID:0050687!9.93e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:4074;1.48e-12;2!DOID:4905;1.48e-12;2!DOID:3498;1.48e-12;2!DOID:1909;1.65e-12;2!DOID:3910;1.85e-12;2!DOID:1793;6.50e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.48e-12,2;DOID:4905,1.48e-12,2;DOID:3498,1.48e-12,2;DOID:1909,1.65e-12,2;DOID:3910,1.85e-12,2;DOID:1793,6.50e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000488!1.16e-09!4 | |ontology_enrichment_uberon=UBERON:0000488!1.16e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.85e-12;2!UBERON:0002173;1.85e-12;2!UBERON:0002186;1.85e-12;2!UBERON:0004821;9.66e-09;3!UBERON:0007499;9.66e-09;3!UBERON:0003215;9.66e-09;3!UBERON:0010368;9.66e-09;3!UBERON:0009911;9.66e-09;3!UBERON:0002299;9.66e-09;3!UBERON:0006524;9.66e-09;3!UBERON:0008874;9.66e-09;3!UBERON:0002169;9.66e-09;3!UBERON:0004894;9.66e-09;3!UBERON:0009856;7.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.85e-12,2;UBERON:0002173,1.85e-12,2;UBERON:0002186,1.85e-12,2;UBERON:0004821,9.66e-09,3;UBERON:0003215,9.66e-09,3;UBERON:0010368,9.66e-09,3;UBERON:0009911,9.66e-09,3;UBERON:0002299,9.66e-09,3;UBERON:0006524,9.66e-09,3;UBERON:0008874,9.66e-09,3;UBERON:0002169,9.66e-09,3;UBERON:0004894,9.66e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,1.17217447210047,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.593042257361244,0,0,0,0,0,0,0,14.0812620129774,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0.529536760149002,0,1.23337732182076,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,4.28198000317451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,1.17217447210047,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.593042257361244,0,0,0,0,0,0,0,14.0812620129774,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0.529536760149002,0,1.23337732182076,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,4.28198000317451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:56589068..56589074,- | |short_description=p@chr5:56589068..56589074,- | ||
}} | }} |
Latest revision as of 15:25, 30 July 2015
Short description: | p@chr5:56589068..56589074, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:56589068..56589074, - |
Coexpression cluster: | C225_ductal_alveolar_giant_prostate_salivary_squamous_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 4.84e-30 | 3 |
neuronal stem cell | 5.83e-12 | 8 |
melanocyte | 9.65e-10 | 10 |
melanoblast | 9.65e-10 | 10 |
pneumocyte | 9.66e-09 | 3 |
pigment cell | 3.24e-07 | 14 |
epithelial cell of pancreas | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.85e-12 | 2 |
alveolar duct | 1.85e-12 | 2 |
bronchiole | 1.85e-12 | 2 |
pulmonary alveolus epithelium | 9.66e-09 | 3 |
alveolus | 9.66e-09 | 3 |
pulmonary lobule | 9.66e-09 | 3 |
lobule | 9.66e-09 | 3 |
alveolus of lung | 9.66e-09 | 3 |
alveolar system | 9.66e-09 | 3 |
pulmonary acinus | 9.66e-09 | 3 |
alveolar sac | 9.66e-09 | 3 |
alveolar wall | 9.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.48e-12 | 2 |
pancreatic carcinoma | 1.48e-12 | 2 |
pancreatic ductal adenocarcinoma | 1.48e-12 | 2 |
melanoma | 1.65e-12 | 2 |
lung adenocarcinoma | 1.85e-12 | 2 |
pancreatic cancer | 6.50e-07 | 4 |