FFCP PHASE1:Hg19::chr6:31138055..31138073,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5460 | |EntrezGene=5460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9221 | |HGNC=9221 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=361bp_to_ENST00000461401_5end | |association_with_transcript=361bp_to_ENST00000461401_5end | ||
|cluster_id=chr6:31138055..31138073,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_3_at_POU5F1_5end | |description=CAGE_peak_3_at_POU5F1_5end | ||
|id=chr6:31138055..31138073,- | |id=chr6:31138055..31138073,- | ||
|ontology_enrichment_celltype=CL:0002322!3.85e-58!5;CL:0000039!4.35e-27!7;CL:0000586!4.35e-27!7;CL:0000540!1.14e-18!6;CL:0000031!1.14e-18!6;CL:0000404!1.14e-18!6;CL:0000047!3.71e-14!8;CL:0000148!3.26e-11!10;CL:0000541!3.26e-11!10;CL:0000147!3.68e-08!14 | |ontology_enrichment_celltype=CL:0002322!3.85e-58!5;CL:0000039!4.35e-27!7;CL:0000586!4.35e-27!7;CL:0000540!1.14e-18!6;CL:0000031!1.14e-18!6;CL:0000404!1.14e-18!6;CL:0000047!3.71e-14!8;CL:0000148!3.26e-11!10;CL:0000541!3.26e-11!10;CL:0000147!3.68e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.78e-57;5!CL:0000540;7.09e-28;6!CL:0000404;7.09e-28;6!CL:0000039;7.43e-24;7!CL:0000586;7.43e-24;7!CL:0002321;1.85e-19;15!CL:0000148;8.80e-17;10!CL:0000147;3.51e-12;14!CL:0000710;1.04e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.73e-57,5;CL:0000540,5.40e-28,6;CL:0000031,5.40e-28,6;CL:0000404,5.40e-28,6;CL:0000039,1.06e-23,7;CL:0000586,1.06e-23,7;CL:0000047,3.42e-21,8;CL:0000148,9.55e-17,10;CL:0000541,9.55e-17,10;CL:0000147,3.72e-12,14;CL:0000133,1.51e-10,59;CL:0000710,1.08e-08,20;CL:0000221,1.16e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;7.09e-28;6!UBERON:0009117;6.36e-17;10!UBERON:0005564;6.36e-17;10 | |||
|ontology_enrichment_disease=DOID:3095!9.23e-19!22;DOID:2994!9.23e-19!22 | |ontology_enrichment_disease=DOID:3095!9.23e-19!22;DOID:2994!9.23e-19!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.95e-08;22!DOID:2994;4.95e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.52e-08,22;DOID:2994,5.52e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.92e-26!11;UBERON:0000473!9.45e-24!8;UBERON:0000991!6.93e-14!21;UBERON:0009196!6.93e-14!21;UBERON:0009117!6.93e-14!21;UBERON:0005564!6.93e-14!21;UBERON:0004176!2.98e-13!22;UBERON:0003101!3.13e-13!22;UBERON:0000079!3.13e-13!22;UBERON:0001301!9.73e-13!1;UBERON:0003133!2.15e-08!48;UBERON:0005156!9.37e-07!59;UBERON:0000990!9.37e-07!59 | |ontology_enrichment_uberon=UBERON:0003135!1.92e-26!11;UBERON:0000473!9.45e-24!8;UBERON:0000991!6.93e-14!21;UBERON:0009196!6.93e-14!21;UBERON:0009117!6.93e-14!21;UBERON:0005564!6.93e-14!21;UBERON:0004176!2.98e-13!22;UBERON:0003101!3.13e-13!22;UBERON:0000079!3.13e-13!22;UBERON:0001301!9.73e-13!1;UBERON:0003133!2.15e-08!48;UBERON:0005156!9.37e-07!59;UBERON:0000990!9.37e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.71e-21;8!UBERON:0003135;1.90e-15;11!UBERON:0000922;1.32e-12;49!UBERON:0000991;2.18e-08;21!UBERON:0003101;4.95e-08;22!UBERON:0000079;4.95e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.75e-21,8;UBERON:0003135,2.37e-15,11;UBERON:0000991,2.45e-08,21;UBERON:0009196,2.45e-08,21;UBERON:0009117,2.45e-08,21;UBERON:0005564,2.45e-08,21;UBERON:0004176,5.52e-08,22;UBERON:0003101,5.52e-08,22;UBERON:0000079,5.52e-08,22 | |||
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|short_description=p3@POU5F1 | |short_description=p3@POU5F1 | ||
}} | }} |
Latest revision as of 19:55, 17 September 2015
Short description: | p3@POU5F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_POU5F1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 361bp_to_ENST00000461401_5end |
EntrezGene: | POU5F1 |
HGNC: | 9221 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.73e-57 | 5 |
neuron | 5.40e-28 | 6 |
neuroblast | 5.40e-28 | 6 |
electrically signaling cell | 5.40e-28 | 6 |
germ line cell | 1.06e-23 | 7 |
germ cell | 1.06e-23 | 7 |
neuronal stem cell | 3.42e-21 | 8 |
melanocyte | 9.55e-17 | 10 |
melanoblast | 9.55e-17 | 10 |
pigment cell | 3.72e-12 | 14 |
neurectodermal cell | 1.51e-10 | 59 |
neurecto-epithelial cell | 1.08e-08 | 20 |
ectodermal cell | 1.16e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 7.75e-21 | 8 |
male reproductive organ | 2.37e-15 | 11 |
gonad | 2.45e-08 | 21 |
indifferent external genitalia | 2.45e-08 | 21 |
indifferent gonad | 2.45e-08 | 21 |
gonad primordium | 2.45e-08 | 21 |
external genitalia | 5.52e-08 | 22 |
male organism | 5.52e-08 | 22 |
male reproductive system | 5.52e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.52e-08 | 22 |
germ cell cancer | 5.52e-08 | 22 |