FFCP PHASE1:Hg19::chr19:42806807..42806830,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:42806807..42806830,-
|short_description=p7@PAFAH1B3
|description=CAGE_peak_7_at_PAFAH1B3_5end
|association_with_transcript=-11bp_to_ENST00000262890,NM_002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5050 | |EntrezGene=5050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8576 | |HGNC=8576 | ||
|TSSclassifier=strong | |||
|UniProt=Q15102 | |UniProt=Q15102 | ||
|association_with_transcript=-11bp_to_ENST00000262890,NM_002573,uc002otg.2_5end | |||
|cluster_id=chr19:42806807..42806830,- | |||
|description=CAGE_peak_7_at_PAFAH1B3_5end | |||
|id=chr19:42806807..42806830,- | |||
|ontology_enrichment_celltype=CL:0000066!1.12e-13!254;CL:0000542!1.60e-13!53;CL:0000051!1.60e-13!53;CL:0000838!3.73e-13!52;CL:0000084!1.34e-08!25;CL:0000827!1.34e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.09e-08;53!CL:0000084;1.39e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.33e-15,53;CL:0000051,5.33e-15,53;CL:0000838,1.36e-14,52;CL:0000066,8.44e-13,253;CL:0000084,2.62e-09,25;CL:0000827,2.62e-09,25;CL:0000945,6.43e-07,24;CL:0000826,6.43e-07,24;CL:0000791,9.17e-07,18;CL:0000789,9.17e-07,18;CL:0002420,9.17e-07,18;CL:0002419,9.17e-07,18;CL:0000790,9.17e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.09e-08;53 | |||
|ontology_enrichment_disease=DOID:162!1.93e-11!235;DOID:14566!1.09e-10!239;DOID:0050686!6.51e-08!137;DOID:0050687!9.57e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.61e-10,235;DOID:14566,6.63e-09,239;DOID:0050687,3.48e-07,143;DOID:0050686,3.49e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@PAFAH1B3 | |||
}} | }} |
Latest revision as of 08:56, 18 September 2015
Short description: | p7@PAFAH1B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PAFAH1B3_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000262890, NM_002573, uc002otg.2_5end |
EntrezGene: | PAFAH1B3 |
HGNC: | 8576 |
UniProt: | Q15102 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.33e-15 | 53 |
common lymphoid progenitor | 5.33e-15 | 53 |
lymphoid lineage restricted progenitor cell | 1.36e-14 | 52 |
epithelial cell | 8.44e-13 | 253 |
T cell | 2.62e-09 | 25 |
pro-T cell | 2.62e-09 | 25 |
lymphocyte of B lineage | 6.43e-07 | 24 |
pro-B cell | 6.43e-07 | 24 |
mature alpha-beta T cell | 9.17e-07 | 18 |
alpha-beta T cell | 9.17e-07 | 18 |
immature T cell | 9.17e-07 | 18 |
mature T cell | 9.17e-07 | 18 |
immature alpha-beta T cell | 9.17e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.61e-10 | 235 |
disease of cellular proliferation | 6.63e-09 | 239 |
cell type cancer | 3.48e-07 | 143 |
organ system cancer | 3.49e-07 | 137 |