FFCP PHASE1:Hg19::chr19:48018166..48018177,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:48018166..48018177,-
|short_description=p2@NAPA
|description=CAGE_peak_2_at_NAPA_5end
|association_with_transcript=319bp_to_uc002phc.1,uc010elf.1,uc010elg...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8775 | |EntrezGene=8775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7641 | |HGNC=7641 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=319bp_to_uc002phc.1,uc010elf.1,uc010elg.1_5end | |||
|cluster_id=chr19:48018166..48018177,- | |||
|description=CAGE_peak_2_at_NAPA_5end | |||
|id=chr19:48018166..48018177,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.70e-14;33!CL:0002057;1.70e-14;33!CL:0000473;6.80e-12;39!CL:0000234;6.80e-12;39!CL:0000576;2.66e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.24e-13,42;CL:0002057,2.24e-13,42;CL:0000473,6.17e-13,48;CL:0000234,6.17e-13,48;CL:0002009,2.07e-10,61;CL:0002194,1.69e-09,59;CL:0000576,1.69e-09,59;CL:0000040,1.69e-09,59;CL:0000559,1.69e-09,59;CL:0000766,2.98e-09,72;CL:0000557,4.23e-09,67;CL:0000839,4.43e-08,66 | |||
|ontology_enrichment_development_v019=CL:0002057;2.21e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.75e-09;3!DOID:127;1.75e-09;3!DOID:0060072;3.41e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.03e-09,3;DOID:127,1.03e-09,3;DOID:0060072,2.32e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.56e-07,76;UBERON:0002405,5.60e-07,93;UBERON:0002193,7.52e-07,108 | |||
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|phase1_expression=0,1.49870366723688,0,0,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0,2.09340350391728,0,0,0.618831764800233,0.662794751455832,1.34465029290355,1.20538905604795,1.46062018077475,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.376627918784408,0.534893840235659,0.492603536699674,0.393553906568396,0.393364276848904,0,0.309632246632152,0,0.30120591877825,1.84877005083394,0,0,0,0,0.401088894940283,1.30206522429511,0,0,0,0.872389432677388,0,0.242584061187816,0.697287110717054,1.6446715520873,0.309706370895104,1.1507695692886,2.0492856522328,4.02019790810595,0.344745680736619,1.29096936716765,0,0.376484679085209,0.272906150057846,0,1.83650335422542,0.641858054152187,3.19668562899521,2.30895910130701,1.79517291859469,2.55734850319616,1.7412554317715,0,0.622822248995575,2.26123798731069,2.08593167368081,1.95469960234605,1.21079900526674,0.368277635987565,0.949387162322653,0.633765858935825,0.425208599930087,0.209658645508376,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0.954053754535364,1.1384259382189,0,0,0,0.560508562981536,0.263384084775077,0,1.57204305099666,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.384273959177026,0.260118695119756,0,0.552700035571697,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0.802320587350522,0.579297615531196,0,1.34140171940727,0.12786256184353,0,0,0.434539556882471,0,0,0.0945348171640679,0.443458794925128,0.351339142772504,0.523916301990851,0,0.370784442784429,0,0.348259474598534,0.531831842075461,0.476981248610684,0,0.371457501329565,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0.550236083880135,0.835979866147242,0.775250277507987,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0,0.81014194788176,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0.732806975721629,1.31780417436063,0,0,0,0.506522046658319,0.397227542439656,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0.653847612453835,0,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.352303495931295,0.485618833104395,0.561803226808994,0,0.122834317311768,0.413303124703062,1.18800285728205,1.48360157567134,0,1.43723628363248,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.45071417671979,0.453728732640084,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.460249493211497,0.161646056818812,0,0.201504196455281,0,0.193260853163297,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0.928735856063958,0.721879481669586,0.591534000199219,0.337169380156203,0,0.772057809126758,0.217879444092406,0.71181185733329,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,1.26755034821831,0,0.590789906681404,0.441463099414651,0,0,0,0,0.301586917234893,0,0.651616610620649,0,0,0.115930404975077,0,1.15493158208859,0.462985512576611,0.570762456703795,0,0,0.738651018262192,0.702012795417713,0.594524649154913,0,0.335964256397719,0,0,0,0,0.492663237895943,0.352193736052904,0.207328115540772,0.432359860250884,0.12624243342638,0.126995788584338,0,0,0,0.411309970813294,0.300343057843917,0.571652865261156,0,0,0.2933531432838,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,2.61460037580088,0.199945982364114,0,0,4.21667878966063,0.479249710983165,0,0,0.579125226670317,2.05476322550383,0,0.224170287987055,0.197030760201927,0.646882724578552,0.385029108839245,0,0,0,0.837581326671744,0.637938751653163,0.749007023947182,5.9832291840805,0.414415513436035,0.24538298343828,1.50051156317903,0.813795071099207,0.415941723061614,1.60586089917446,0.630809660135739,0.35142424497814,0.300946099727719,2.27407504055985,1.03473071292505,0,0.368738337083406,0.347534457872331,0.195801157462741,0.343143423810856,0,0.647142602455851,0.640365346820666,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0,0.64341568457443,0,0.308419387605311,0.177561725313127,0,0,0.232420756919918,0.362578348774867,0,0.0920809889358963,0.229628896329213,0.364182336013434,0.524497659837696,0,0.15403067420883,0,0,0.105551628892876,0,0.680374821106063,0.647747748306418,0,0,0,0,0,0.447749509444357,0.219259876645935,0.522870902049801,0.256450125116389,0,0,0.412164046590889,0.824125183365091,0,0.574265537996172,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.827019434907183,0.214840489736547,0.725083469571143,0.340906509664404,0.0890320356467374,0,0,0.255225424989168,0.2023155617111,0,0.31481234683064,0,0.616067160352178,0.532306030317022,0,0.18532421910392,0.715624433709956,0.744316738719335,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0.54907405947211,0.353437207037059,0,3.17020642346017,0.421258456238981,0,0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| ||
|short_description=p2@NAPA | |||
}} | }} |
Latest revision as of 00:15, 19 September 2015
Short description: | p2@NAPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 319bp_to_uc002phc.1, uc010elf.1, uc010elg.1_5end |
EntrezGene: | NAPA |
HGNC: | 7641 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.24e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.24e-13 | 42 |
defensive cell | 6.17e-13 | 48 |
phagocyte | 6.17e-13 | 48 |
macrophage dendritic cell progenitor | 2.07e-10 | 61 |
monopoietic cell | 1.69e-09 | 59 |
monocyte | 1.69e-09 | 59 |
monoblast | 1.69e-09 | 59 |
promonocyte | 1.69e-09 | 59 |
myeloid leukocyte | 2.98e-09 | 72 |
granulocyte monocyte progenitor cell | 4.23e-09 | 67 |
myeloid lineage restricted progenitor cell | 4.43e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.56e-07 | 76 |
immune system | 5.60e-07 | 93 |
hemolymphoid system | 7.52e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.03e-09 | 3 |
leiomyoma | 1.03e-09 | 3 |
benign neoplasm | 2.32e-07 | 4 |