FFCP PHASE1:Hg19::chr9:16477370..16477375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:16477370..16477375,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_at_chr9:16477370..16477375,- | |description=CAGE_peak_at_chr9:16477370..16477375,- | ||
|id=chr9:16477370..16477375,- | |id=chr9:16477370..16477375,- | ||
|ontology_enrichment_celltype=CL:0000594!1.26e-07!3;CL:0002504!1.37e-07!3;CL:1000279!1.37e-07!3;CL:1000280!1.37e-07!3;CL:0000064!3.23e-07!3;CL:0005012!3.23e-07!3;CL:0000067!3.23e-07!3;CL:0002304!3.23e-07!3 | |ontology_enrichment_celltype=CL:0000594!1.26e-07!3;CL:0002504!1.37e-07!3;CL:1000279!1.37e-07!3;CL:1000280!1.37e-07!3;CL:0000064!3.23e-07!3;CL:0005012!3.23e-07!3;CL:0000067!3.23e-07!3;CL:0002304!3.23e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002504;1.71e-14;3!CL:1000279;1.71e-14;3!CL:0002590;1.71e-14;3!CL:1000280;1.71e-14;3!CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,1.83e-14,3;CL:0002504,2.09e-14,3;CL:1000279,2.09e-14,3;CL:1000280,2.09e-14,3;CL:0000306,3.10e-11,4;CL:0002222,3.10e-11,4;CL:0002224,3.10e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!3.23e-07!3;UBERON:0001775!3.23e-07!3 | |ontology_enrichment_uberon=UBERON:0001778!3.23e-07!3;UBERON:0001775!3.23e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002426;1.81e-40;1!UBERON:0003831;1.81e-40;1!UBERON:0003898;1.81e-40;1!UBERON:0004830;1.81e-40;1!UBERON:0003830;1.81e-40;1!UBERON:0005175;1.81e-40;1!UBERON:0001774;1.81e-40;1!UBERON:0001103;1.81e-40;1!UBERON:0005090;5.15e-21;2!UBERON:0001630;5.15e-21;2!UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0005284;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,9.91e-41,1;UBERON:0003831,9.91e-41,1;UBERON:0003898,9.91e-41,1;UBERON:0004830,9.91e-41,1;UBERON:0003830,9.91e-41,1;UBERON:0005175,9.91e-41,1;UBERON:0001774,9.91e-41,1;UBERON:0001103,9.91e-41,1;UBERON:0010084,9.91e-41,1;UBERON:0005090,3.81e-21,2;UBERON:0001630,3.81e-21,2;UBERON:0010077,3.10e-11,4;UBERON:0005389,3.10e-11,4;UBERON:0000484,3.10e-11,4;UBERON:0002546,3.10e-11,4;UBERON:0000965,3.10e-11,4;UBERON:0001803,3.10e-11,4;UBERON:0003073,3.10e-11,4;UBERON:0005426,3.10e-11,4;UBERON:0005284,3.22e-09,5 | |||
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| ||
|short_description=p@chr9:16477370..16477375,- | |short_description=p@chr9:16477370..16477375,- | ||
}} | }} |
Latest revision as of 00:54, 1 August 2015
Short description: | p@chr9:16477370..16477375, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:16477370..16477375, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 1.83e-14 | 3 |
enteric smooth muscle cell | 2.09e-14 | 3 |
smooth muscle cell of large intestine | 2.09e-14 | 3 |
smooth muscle cell of colon | 2.09e-14 | 3 |
crystallin accumulating cell | 3.10e-11 | 4 |
vertebrate lens cell | 3.10e-11 | 4 |
lens epithelial cell | 3.10e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 9.91e-41 | 1 |
respiratory system muscle | 9.91e-41 | 1 |
skeletal muscle of trunk | 9.91e-41 | 1 |
respiratory system skeletal muscle | 9.91e-41 | 1 |
thoracic segment muscle | 9.91e-41 | 1 |
chest organ | 9.91e-41 | 1 |
muscle of trunk | 9.91e-41 | 1 |
diaphragm | 9.91e-41 | 1 |
future diaphragm | 9.91e-41 | 1 |
muscle structure | 3.81e-21 | 2 |
muscle organ | 3.81e-21 | 2 |
cuboidal epithelium | 3.10e-11 | 4 |
transparent eye structure | 3.10e-11 | 4 |
simple cuboidal epithelium | 3.10e-11 | 4 |
cranial placode | 3.10e-11 | 4 |
lens of camera-type eye | 3.10e-11 | 4 |
epithelium of lens | 3.10e-11 | 4 |
lens placode | 3.10e-11 | 4 |
lens vesicle | 3.10e-11 | 4 |
brain vasculature | 3.22e-09 | 5 |