FFCP PHASE1:Hg19::chr19:49928618..49928665,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:49928618..49928665,+
|short_description=p@chr19:49928618..49928665,+
|description=CAGE_peak_at_chr19:49928618..49928665,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:49928618..49928665,+ | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr19:49928618..49928665,+ | |||
|id=chr19:49928618..49928665,+ | |||
|ontology_enrichment_celltype=CL:0002322!7.38e-16!5;CL:0000066!3.32e-11!254;CL:0000242!9.77e-08!2;CL:0000039!6.40e-07!7;CL:0000586!6.40e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.57e-31;5!CL:0000123;1.45e-21;2!CL:0000242;1.45e-21;2!CL:0002321;1.05e-10;15!CL:0000148;1.94e-09;10!CL:0000312;3.46e-09;5!CL:0000240;8.51e-08;6!CL:0000311;8.51e-08;6!CL:0000079;8.51e-08;6!CL:0000237;8.51e-08;6!CL:0002077;5.93e-07;34!CL:0000147;6.98e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.05e-31,5;CL:0000242,1.53e-21,2;CL:0000148,1.78e-09,10;CL:0000541,1.78e-09,10;CL:0000312,3.53e-09,5;CL:0000240,8.66e-08,6;CL:0000311,8.66e-08,6;CL:0000079,8.66e-08,6;CL:0000237,8.66e-08,6;CL:0000036,8.66e-08,6;CL:0000357,8.66e-08,6;CL:0000114,8.66e-08,6;CL:0002077,2.84e-07,34;CL:0000147,6.57e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000357;8.51e-08;6!CL:0000114;8.51e-08;6 | |||
|ontology_enrichment_disease=DOID:0050687!2.23e-25!143;DOID:305!7.98e-23!106;DOID:162!6.34e-16!235;DOID:14566!2.35e-15!239;DOID:299!5.86e-08!25;DOID:3119!2.47e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.52e-11;1!DOID:1357;1.52e-11;1!DOID:6193;2.68e-11;1!DOID:4362;4.49e-09;5!DOID:3119;4.16e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.45e-11,1;DOID:1357,1.45e-11,1;DOID:6193,2.42e-11,1;DOID:4362,4.49e-09,5;DOID:3119,4.25e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.20e-09!8;UBERON:0003101!3.32e-07!22;UBERON:0000079!3.32e-07!22;UBERON:0004119!8.16e-07!169;UBERON:0000925!8.16e-07!169;UBERON:0006595!8.16e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.52e-11;1!UBERON:0001825;1.52e-11;1!UBERON:0000945;4.87e-09;5!UBERON:0010039;4.87e-09;5!UBERON:0000002;1.06e-07;6!UBERON:0001560;1.06e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.45e-11,1;UBERON:0001825,1.45e-11,1;UBERON:0000002,1.06e-07,6;UBERON:0001560,1.06e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,0.397589304964456,1.2781333715647,4.76840853070704,1.7662459561294,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0.614942192715568,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3173048572111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,12.3447046448595,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.8508686411148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0.150323419414493,0.622129148383483,0,0,0,0,0,0.138674673013139,0.347119476670262,0,0,0,2.75177651954586,0.483781656445426,0.292357268344742,0,0,0,0,0,0,0,0,1.36269994427607,0,0,2.59362750877391,20.1584409252012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.513260513652988,1.40963004463334,0,0,0,0,0,0.243585196761792,0.638341257770182,0,0,0,0,5.81100156125867,0,0,0,0,0,0,0,0,0.151649117541648,0,0,62.2885424723153,5.79684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.49131575253029,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.472775363535873,0.111231401892069,0,0,0,0,0,0,0,0,2.67355278346688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,4.44484980578001,0,0,0,0.879524133963433,4.07599677630019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0.203977659483963,0.26721740526556,0,0.752122617877125,1.13668047327359,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,0.397589304964456,1.2781333715647,4.76840853070704,1.7662459561294,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0.614942192715568,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3173048572111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,12.3447046448595,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.8508686411148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0.150323419414493,0.622129148383483,0,0,0,0,0,0.138674673013139,0.347119476670262,0,0,0,2.75177651954586,0.483781656445426,0.292357268344742,0,0,0,0,0,0,0,0,1.36269994427607,0,0,2.59362750877391,20.1584409252012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.513260513652988,1.40963004463334,0,0,0,0,0,0.243585196761792,0.638341257770182,0,0,0,0,5.81100156125867,0,0,0,0,0,0,0,0,0.151649117541648,0,0,62.2885424723153,5.79684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.49131575253029,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.472775363535873,0.111231401892069,0,0,0,0,0,0,0,0,2.67355278346688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,4.44484980578001,0,0,0,0.879524133963433,4.07599677630019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0.203977659483963,0.26721740526556,0,0.752122617877125,1.13668047327359,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:49928618..49928665,+ | |||
}} | }} |
Latest revision as of 16:03, 27 July 2015
Short description: | p@chr19:49928618..49928665, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49928618..49928665, + |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.05e-31 | 5 |
Merkel cell | 1.53e-21 | 2 |
melanocyte | 1.78e-09 | 10 |
melanoblast | 1.78e-09 | 10 |
keratinocyte | 3.53e-09 | 5 |
stratified squamous epithelial cell | 8.66e-08 | 6 |
keratin accumulating cell | 8.66e-08 | 6 |
stratified epithelial cell | 8.66e-08 | 6 |
keratinizing barrier epithelial cell | 8.66e-08 | 6 |
epithelial fate stem cell | 8.66e-08 | 6 |
stratified epithelial stem cell | 8.66e-08 | 6 |
surface ectodermal cell | 8.66e-08 | 6 |
ecto-epithelial cell | 2.84e-07 | 34 |
pigment cell | 6.57e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.45e-11 | 1 |
paranasal sinus | 1.45e-11 | 1 |
uterine cervix | 1.06e-07 | 6 |
neck of organ | 1.06e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.45e-11 | 1 |
maxillary sinus cancer | 1.45e-11 | 1 |
epithelioid sarcoma | 2.42e-11 | 1 |
cervical cancer | 4.49e-09 | 5 |
gastrointestinal system cancer | 4.25e-07 | 14 |