FFCP PHASE1:Hg19::chr19:53758058..53758088,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:53758058..53758088,-
|short_description=p2@ZNF677
|description=CAGE_peak_2_at_ZNF677_5end
|association_with_transcript=0bp_to_ENST00000416063,uc002qbh.2_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=342926 | |EntrezGene=342926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28730 | |HGNC=28730 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XU0 | |UniProt=Q86XU0 | ||
|association_with_transcript=0bp_to_ENST00000416063,uc002qbh.2_5end | |||
|cluster_id=chr19:53758058..53758088,- | |||
|description=CAGE_peak_2_at_ZNF677_5end | |||
|id=chr19:53758058..53758088,- | |||
|ontology_enrichment_celltype=CL:0000221!2.38e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.97e-07,72;CL:0002321,8.07e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!3.14e-09!173;UBERON:0006601!3.14e-09!173;UBERON:0004121!9.05e-09!169;UBERON:0000468!1.43e-08!659;UBERON:0000073!2.21e-08!94;UBERON:0001016!2.21e-08!94;UBERON:0000483!3.95e-08!309;UBERON:0000475!7.79e-08!365;UBERON:0000119!8.03e-08!312 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.53e-09,171;UBERON:0000924,1.53e-09,171;UBERON:0006601,1.53e-09,171;UBERON:0000483,4.37e-09,306;UBERON:0000119,1.44e-08,309;UBERON:0001016,2.34e-07,89;UBERON:0010314,5.91e-07,132 | |||
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| ||
|short_description=p2@ZNF677 | |||
}} | }} |
Latest revision as of 18:37, 19 September 2015
Short description: | p2@ZNF677 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZNF677_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000416063, uc002qbh.2_5end |
EntrezGene: | ZNF677 |
HGNC: | 28730 |
UniProt: | Q86XU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.97e-07 | 72 |
embryonic cell | 8.07e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.53e-09 | 171 |
ectoderm | 1.53e-09 | 171 |
presumptive ectoderm | 1.53e-09 | 171 |
epithelium | 4.37e-09 | 306 |
cell layer | 1.44e-08 | 309 |
nervous system | 2.34e-07 | 89 |
structure with developmental contribution from neural crest | 5.91e-07 | 132 |