FF:1564-45I6: Difference between revisions

Latest revision as of 19:08, 4 June 2020

Name:	gonad, embryo E13
Species:	Mouse (Mus musculus)
Library ID:	CNhs11044
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	gonad
dev stage	13 days embryo
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004837

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11044		CAGE		DRX008970		DRR009844

Accession ID Mm9

Library id		BAM		CTSS
CNhs11044		DRZ001269		DRZ002652

Accession ID Mm10

Library id		BAM		CTSS
CNhs11044		DRZ012619		DRZ014002

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs11044

0	0
1	0
10	0
100	0
1000	-0.0322
1001	-0.0356
1002	0.586
1003	-0.102
1004	0.112
1005	-0.0389
1006	-0.0465
1007	0.113
1008	0
1009	-0.00536
101	0.0975
1010	0
1011	-0.0287
1012	0
1013	-0.116
1014	0.358
1015	0.159
1016	0.339
1017	0
1018	0
1019	0
102	0
1020	0
1021	0
1022	0.0638
1023	0
1024	-0.011
1025	0
1026	0.0494
1027	0
1028	0
1029	0.117
103	0.164
1030	0
1031	0.416
1032	-0.0159
1033	0.0397
1034	0
1035	0.0788
1036	0.132
1037	0
1038	0.0817
1039	-0.108
104	0
1040	0.0559
1041	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11044

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	2.30203e-4
MA0003.1	MA0003.1	0.561
MA0004.1	MA0004.1	0.601
MA0006.1	MA0006.1	0.293
MA0007.1	MA0007.1	0.427
MA0009.1	MA0009.1	0.775
MA0014.1	MA0014.1	0.646
MA0017.1	MA0017.1	0.00329
MA0018.2	MA0018.2	0.163
MA0019.1	MA0019.1	0.906
MA0024.1	MA0024.1	3.76289e-6
MA0025.1	MA0025.1	0.00118
MA0027.1	MA0027.1	0.129
MA0028.1	MA0028.1	0.173
MA0029.1	MA0029.1	0.986
MA0030.1	MA0030.1	0.036
MA0031.1	MA0031.1	0.00374
MA0035.2	MA0035.2	0.24
MA0038.1	MA0038.1	0.153
MA0039.2	MA0039.2	0.127
MA0040.1	MA0040.1	0.377
MA0041.1	MA0041.1	0.244
MA0042.1	MA0042.1	0.461
MA0043.1	MA0043.1	0.319
MA0046.1	MA0046.1	3.95704e-7
MA0047.2	MA0047.2	0.0178
MA0048.1	MA0048.1	0.0135
MA0050.1	MA0050.1	0.0142
MA0051.1	MA0051.1	0.0038
MA0052.1	MA0052.1	5.56738e-6
MA0055.1	MA0055.1	0.00532
MA0057.1	MA0057.1	0.128
MA0058.1	MA0058.1	0.432
MA0059.1	MA0059.1	0.221
MA0060.1	MA0060.1	1.93354e-6
MA0061.1	MA0061.1	0.121
MA0062.2	MA0062.2	0.727
MA0065.2	MA0065.2	2.71987e-4
MA0066.1	MA0066.1	0.0493
MA0067.1	MA0067.1	0.411
MA0068.1	MA0068.1	0.00216
MA0069.1	MA0069.1	0.541
MA0070.1	MA0070.1	0.851
MA0071.1	MA0071.1	0.283
MA0072.1	MA0072.1	0.0369
MA0073.1	MA0073.1	0.655
MA0074.1	MA0074.1	0.871
MA0076.1	MA0076.1	0.154
MA0077.1	MA0077.1	0.982
MA0078.1	MA0078.1	0.527
MA0079.2	MA0079.2	0.945
MA0080.2	MA0080.2	1.85304e-7
MA0081.1	MA0081.1	0.345
MA0083.1	MA0083.1	0.128
MA0084.1	MA0084.1	0.615
MA0087.1	MA0087.1	0.318
MA0088.1	MA0088.1	0.597
MA0090.1	MA0090.1	0.987
MA0091.1	MA0091.1	0.578
MA0092.1	MA0092.1	0.677
MA0093.1	MA0093.1	0.584
MA0099.2	MA0099.2	2.69456e-7
MA0100.1	MA0100.1	0.781
MA0101.1	MA0101.1	0.305
MA0102.2	MA0102.2	0.0726
MA0103.1	MA0103.1	0.00372
MA0104.2	MA0104.2	0.241
MA0105.1	MA0105.1	0.0409
MA0106.1	MA0106.1	0.226
MA0107.1	MA0107.1	0.164
MA0108.2	MA0108.2	0.00213
MA0111.1	MA0111.1	0.474
MA0112.2	MA0112.2	5.7843e-4
MA0113.1	MA0113.1	0.463
MA0114.1	MA0114.1	0.00204
MA0115.1	MA0115.1	0.0459
MA0116.1	MA0116.1	0.0482
MA0117.1	MA0117.1	0.0299
MA0119.1	MA0119.1	0.206
MA0122.1	MA0122.1	0.926
MA0124.1	MA0124.1	0.283
MA0125.1	MA0125.1	0.831
MA0131.1	MA0131.1	0.21
MA0135.1	MA0135.1	0.273
MA0136.1	MA0136.1	3.40985e-4
MA0137.2	MA0137.2	0.194
MA0138.2	MA0138.2	1.82196e-4
MA0139.1	MA0139.1	0.638
MA0140.1	MA0140.1	0.623
MA0141.1	MA0141.1	0.591
MA0142.1	MA0142.1	0.558
MA0143.1	MA0143.1	0.111
MA0144.1	MA0144.1	0.145
MA0145.1	MA0145.1	0.00767
MA0146.1	MA0146.1	0.729
MA0147.1	MA0147.1	0.242
MA0148.1	MA0148.1	0.00783
MA0149.1	MA0149.1	0.0488
MA0150.1	MA0150.1	3.2078e-4
MA0152.1	MA0152.1	0.211
MA0153.1	MA0153.1	6.38008e-5
MA0154.1	MA0154.1	0.0489
MA0155.1	MA0155.1	0.971
MA0156.1	MA0156.1	0.0867
MA0157.1	MA0157.1	0.0704
MA0159.1	MA0159.1	0.0052
MA0160.1	MA0160.1	0.149
MA0162.1	MA0162.1	0.401
MA0163.1	MA0163.1	0.835
MA0164.1	MA0164.1	0.964
MA0258.1	MA0258.1	0.00208
MA0259.1	MA0259.1	0.203

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11044

Novel motif	Logo	P-value
1	1	0.115
10	10	0.41
100	100	0.726
101	101	0.519
102	102	0.844
103	103	0.366
104	104	0.843
105	105	0.228
106	106	0.012
107	107	0.2
108	108	0.496
109	109	0.256
11	11	0.247
110	110	0.932
111	111	0.288
112	112	0.428
113	113	0.418
114	114	0.0418
115	115	0.437
116	116	0.463
117	117	0.374
118	118	0.844
119	119	0.205
12	12	0.516
120	120	0.818
121	121	0.273
122	122	0.737
123	123	0.106
124	124	0.169
125	125	0.415
126	126	0.957
127	127	0.0615
128	128	0.00599
129	129	0.0312
13	13	0.973
130	130	0.224
131	131	0.222
132	132	0.569
133	133	0.527
134	134	0.595
135	135	0.932
136	136	0.697
137	137	0.698
138	138	0.488
139	139	0.0502
14	14	0.177
140	140	0.94
141	141	0.176
142	142	0.322
143	143	0.102
144	144	0.372
145	145	0.967
146	146	0.268
147	147	0.835
148	148	0.192
149	149	0.258
15	15	0.118
150	150	0.88
151	151	0.0439
152	152	0.114
153	153	0.882
154	154	0.512
155	155	0.837
156	156	2.80617e-4
157	157	0.574
158	158	0.334
159	159	0.198
160	160	0.747
161	161	0.862
162	162	0.997
163	163	0.00882
164	164	0.464
165	165	0.102
166	166	0.316
167	167	0.652
168	168	0.122
169	169	0.0915
17	17	0.112
18	18	0.111
19	19	0.803
2	2	0.526
20	20	0.377
21	21	0.696
22	22	0.559
23	23	0.137
24	24	0.6
25	25	0.277
26	26	0.848
27	27	0.369
28	28	0.244
29	29	0.751
3	3	0.385
30	30	0.561
31	31	0.219
32	32	0.308
33	33	0.947
34	34	0.764
35	35	0.111
36	36	0.262
37	37	0.169
38	38	0.657
39	39	0.85
4	4	0.743
40	40	0.404
41	41	0.0598
42	42	0.767
43	43	0.224
44	44	0.0775
45	45	0.409
46	46	0.312
47	47	0.287
48	48	0.283
49	49	0.13
5	5	0.169
50	50	0.8
51	51	0.683
52	52	0.268
53	53	0.564
54	54	0.365
55	55	0.503
56	56	0.318
57	57	0.912
58	58	0.25
59	59	0.142
6	6	0.848
60	60	0.0888
61	61	0.581
62	62	0.0705
63	63	0.194
64	64	0.657
65	65	0.206
66	66	0.967
67	67	0.821
68	68	0.0836
69	69	0.872
7	7	0.363
70	70	0.00188
71	71	0.31
72	72	0.35
73	73	0.143
74	74	0.747
75	75	0.197
76	76	0.469
77	77	0.317
78	78	0.214
79	79	0.88
8	8	0.236
80	80	0.0706
81	81	0.315
82	82	0.217
83	83	0.346
84	84	0.0786
85	85	0.00599
86	86	0.32
87	87	0.259
88	88	0.805
89	89	0.0947
9	9	0.753
90	90	0.104
91	91	0.517
92	92	0.125
93	93	0.681
94	94	0.364
95	95	0.188
96	96	0.503
97	97	0.908
98	98	0.131
99	99	0.799

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11044

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011282 mouse gonad- embryo E13 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000991 (gonad)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000999 (fetal tissue sample)
0000292 (embryonic day sample - mouse)
0000004 (tissue sample)
0000293 (mouse embryonic day 13 sample)
0011282 (mouse gonad- embryo E13 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000991,UBERON:0000926,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000480,UBERON:0000923,UBERON:0000990,UBERON:0002050,UBERON:0005423,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0005291,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0001048,UBERON:0006598,UBERON:0003886,UBERON:0002532,UBERON:0006603,UBERON:0005564
+|DRA_sample_Accession=CAGE@SAMD00004837
+|accession_numbers=CAGE;DRX008970;DRR009844;DRZ001269;DRZ002652;DRZ012619;DRZ014002
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000991,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000999,FF:0000292,FF:0000004,FF:0000293,FF:0011282
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr1:140739014..140739032,-!p1@Lhx9!2.01!125.79!Lhx9;;chr10:22539932..22539956,-!p1@Tcf21!1.77!148.68!Tcf21;;chr15:102828658..102828678,+!p1@Hoxc6!1.77!58.32!Hoxc6;;chrX:90531838..90531861,+!p1@Arx!1.67!57.52!Arx;;chr2:104966766..104966786,+!p1@Wt1!1.61!62.30!Wt1;;chr7:147129712..147129774,+!p1@Utf1!1.59!37.82!Utf1;;chr10:119913546..119913583,-!p3@Hmga2!1.57!74.04!Hmga2;;chr2:38570011..38570034,-!p1@Nr5a1!1.57!35.83!Nr5a1;;chr10:119913278..119913298,-!p2@Hmga2!1.56!76.83!Hmga2;;chr10:119914001..119914078,-!p4@Hmga2!1.52!43.19!Hmga2;;chr2:74549968..74549996,+!p1@Hoxd3!1.52!40.01!Hoxd3;;chr10:119913310..119913366,-!p1@Hmga2!1.48!219.53!Hmga2;;chr2:104966874..104966907,+!p2@Wt1!1.47!28.66!Wt1;;chr19:59533221..59533271,+!p1@Emx2!1.41!30.25!Emx2;;chr14:63864056..63864102,-!p1@Gata4!1.40!41.60!Gata4;;chr2:104966933..104966966,+!p3@Wt1!1.36!21.89!Wt1;;chr8:59799772..59799789,+!p1@Hand2!1.32!56.72!Hand2;;chr6:52163319..52163342,-!p1@Hoxa3!1.32!28.86!Hoxa3;;chr2:74550015..74550057,+!p2@Hoxd3!1.22!15.52!Hoxd3;;chr6:52176164..52176195,-!p1@Hoxa9!1.21!18.71!Hoxa9;;chr19:59533429..59533470,+!p4@Emx2!1.20!14.93!Emx2;;chr2:24331085..24331100,-!p1@Pax8!1.19!14.33!Pax8;;chr2:74529970..74529997,+!p1@Hoxd10!1.17!13.93!Hoxd10;;chr19:59533139..59533152,+!p2@Emx2!1.16!13.53!Emx2;;chr17:35642997..35643014,+!p1@Pou5f1!1.13!12.54!Pou5f1;;chr15:102828642..102828653,+!p2@Hoxc6!1.13!12.34!Hoxc6;;chr7:6649134..6649167,-!p1@Zim1!1.12!65.68!Zim1;;chr6:88148650..88148669,+!p1@Gata2!1.11!99.52!Gata2;;chr12:34642510..34642530,+!p1@Twist1!1.09!36.22!Twist1;;chr17:35642973..35642994,+!p2@Pou5f1!1.09!11.34!Pou5f1;;chr11:18918434..18918489,-!p3@Meis1!1.06!16.72!Meis1;;chr11:96153767..96153822,+!p1@Hoxb6!1.05!16.12!Hoxb6;;chr11:85646303..85646329,+!p1@Tbx2!1.02!64.49!Tbx2;;chr6:52167459..52167492,-!p1@Hoxa7!1.00!10.95!Hoxa7;;chr3:54985946..54985981,+!p1@Sohlh2!1.00!8.96!Sohlh2;;chr10:126778916..126778974,-!p1@Gli1!0.99!19.90!Gli1;;chr15:102797288..102797302,+!p1@Hoxc10!0.99!8.76!Hoxc10;;chr15:35225845..35225867,+!p1@Osr2!0.98!22.09!Osr2;;chr12:3891810..3891829,+!p2@Dnmt3a!0.98!13.34!Dnmt3a;;chr14:63890459..63890484,-!p4@Gata4!0.97!8.36!Gata4;;chr9:71743854..71743909,-!p1@Tcf12!0.96!66.28!Tcf12;;chr11:85646263..85646278,+!p2@Tbx2!0.96!21.30!Tbx2;;chr15:102820964..102821006,+!p1@Hoxc8!0.96!8.16!Hoxc8;;chr15:102820946..102820961,+!p3@Hoxc8!0.96!8.16!Hoxc8;;chr10:119913792..119913820,-!p5@Hmga2!0.95!13.93!Hmga2;;chr12:28027561..28027591,-!p1@Sox11!0.94!52.74!Sox11;;chr2:104966662..104966673,+!p4@Wt1!0.93!7.56!Wt1;;chr6:52190467..52190500,-!p1@Hoxa10!0.92!7.36!Hoxa10;;chr7:77511403..77511450,-!p3@Nr2f2!0.91!15.72!Nr2f2;;chr6:52184901..52184959,-!p2@Hoxa10!0.91!7.17!Hoxa10;;chr19:59533163..59533185,+!p3@Emx2!0.91!7.17!Emx2;;chr2:104966465..104966479,+!p6@Wt1!0.89!6.77!Wt1;;chr7:147129777..147129814,+!p2@Utf1!0.89!6.77!Utf1;;chr15:102839948..102839975,+!p3@Hoxc6!0.89!6.77!Hoxc6;;chr14:63890660..63890687,-!p7@Gata4!0.88!6.57!Gata4;;chr2:74536026..74536039,+!p1@Hoxd9!0.88!6.57!Hoxd9;;chr8:26958093..26958148,-!p2@Ash2l!0.88!6.57!Ash2l;;chr10:12810631..12810649,+!p1@Plagl1!0.87!178.33!Plagl1;;chr2:70313168..70313184,+!p1@Sp5!0.87!9.95!Sp5;;chr15:40486883..40486903,+!p4@Zfpm2!0.87!8.76!Zfpm2;;chr11:83664365..83664383,+!p1@Hnf1b!0.87!6.37!Hnf1b;;chr13:78339134..78339185,-!p5@Nr2f1!0.86!7.76!Nr2f1;;chr10:119913266..119913277,-!p6@Hmga2!0.86!6.17!Hmga2;;chr11:84339016..84339044,-!p1@Lhx1!0.86!6.17!Lhx1;;chr2:74536050..74536065,+!p2@Hoxd9!0.86!6.17!Hoxd9;;chr13:53568104..53568156,-!p1@Msx2!0.85!9.35!Msx2;;chr15:102844431..102844445,+!p1@Hoxc5!0.84!5.97!Hoxc5;;chr2:105003277..105003280,+!p5@Wt1!0.84!5.97!Wt1;;chrX:45245679..45245702,-!p1@Smarca1!0.83!27.27!Smarca1;;chr12:3891753..3891801,+!p4@Dnmt3a!0.83!9.75!Dnmt3a;;chr13:99124189..99124205,+!p1@Foxd1!0.83!8.96!Foxd1;;chr11:18918406..18918431,-!p6@Meis1!0.82!7.76!Meis1;;chrX:83437105..83437121,+!p1@Nr0b1!0.82!5.57!Nr0b1;;chr11:18918917..18918944,-!p1@Meis1!0.81!76.43!Meis1;;chr4:84320893..84320910,-!p1@Bnc2!0.81!12.74!Bnc2;;chr11:18918820..18918831,-!p4@Meis1!0.81!10.75!Meis1;;chr10:5636374..5636421,-!p1@Esr1!0.81!6.97!Esr1;;chr10:5734525..5734569,-!p3@Esr1!0.80!9.16!Esr1;;chr15:102865088..102865107,+!p1@Hoxc4!0.80!7.17!Hoxc4;;chr10:102491237..102491291,-!p2@Alx1!0.80!5.37!Alx1;;chr19:59532915..59532940,+!p5@Emx2!0.80!5.37!Emx2;;chr7:77505617..77505632,-!p1@Nr2f2!0.79!264.32!Nr2f2;;chr7:77511234..77511302,-!p2@Nr2f2!0.79!37.62!Nr2f2;;chr14:63864337..63864381,-!p6@Gata4!0.79!5.17!Gata4;;chr7:52471143..52471186,+!p1@Tead2!0.78!58.91!Tead2;;chr1:38684260..38684312,-!p2@Aff3!0.78!38.81!Aff3;;chr15:102865131..102865151,+!p2@Hoxc4!0.78!5.77!Hoxc4;;chr15:102821007..102821021,+!p2@Hoxc8!0.78!4.98!Hoxc8;;chr2:104966436..104966455,+!p7@Wt1!0.78!4.98!Wt1;;chr19:25580110..25580163,+!p1@Dmrt1!0.78!4.98!Dmrt1;;chr18:76219118..76219155,+!p1@Zbtb7c!0.77!9.16!Zbtb7c;;chr2:115891534..115891589,-!p1@Meis2!0.76!73.64!Meis2;;chr19:10315179..10315241,-!p1@Gm98!0.76!55.13!Gm98;;chr11:74981654..74981658,-!p1@Hic1!0.76!20.50!Hic1;;chr7:17647736..17647772,-!p1@Hif3a!0.76!18.31!Hif3a;;chr2:74529998..74530020,+!p2@Hoxd10!0.76!4.78!Hoxd10;;chr7:147129680..147129693,+!p3@Utf1!0.75!4.58!Utf1;;chr6:122657610..122657626,+!p1@Nanog,p1@Nanogpd!0.75!4.58!Nanog;;chr2:65683890..65683907,+!p1@Csrnp3!0.74!9.16!Csrnp3;;chrX:110411840..110411860,+!p1@Dach2!0.74!5.57!Dach2;;chr9:98855868..98855895,+!p1@Foxl2!0.73!4.38!Foxl2;;chr11:96143843..96143868,+!p3@Hoxb8!0.73!4.38!Hoxb8;;chr10:5636354..5636373,-!p2@Esr1!0.73!4.38!Esr1;;chr12:12948633..12948651,-!p1@Mycn!0.72!45.58!Mycn;;chr7:77511622..77511657,-!p5@Nr2f2!0.72!5.57!Nr2f2;;chr11:96143666..96143725,+!p1@Hoxb8!0.72!4.98!Hoxb8;;chr19:25746898..25746910,+!p1@Dmrt2!0.71!6.37!Dmrt2;;chr10:102491405..102491416,-!p1@Alx1!0.71!4.18!Alx1;;chr7:77511311..77511352,-!p4@Nr2f2!0.70!8.76!Nr2f2;;chr14:63890491..63890516,-!p2@Gata4!0.70!3.98!Gata4;;chr15:102839976..102839989,+!p4@Hoxc6!0.70!3.98!Hoxc6;;chr17:37139472..37139514,+!p1@Zfp57!0.69!30.05!Zfp57;;chr18:11052642..11052659,+!p1@Gata6!0.69!22.29!Gata6;;chr14:22807107..22807119,-!p2@Zfp503!0.69!19.31!Zfp503;;chr2:169458838..169458859,+!p4@Tshz2!0.69!8.36!Tshz2;;chr1:120879128..120879183,-!p3@Gli2!0.69!7.96!Gli2;;chr2:169458799..169458832,+!p5@Tshz2!0.69!6.77!Tshz2;;chr2:74542918..74542971,+!p1@Hoxd8!0.69!6.17!Hoxd8;;chr16:14705925..14705951,+!p1@Snai2!0.68!30.25!Snai2;;chr11:85646341..85646352,+!p3@Tbx2!0.68!8.16!Tbx2;;chr7:89137163..89137200,-!p1@Bnc1!0.68!4.78!Bnc1;;chr11:18918959..18918976,-!p2@Meis1!0.66!56.13!Meis1;;chr15:40486566..40486600,+!p1@Zfpm2!0.66!24.08!Zfpm2;;chr4:3865501..3865548,-!p1@Plag1!0.66!20.90!Plag1;;chrX:48558950..48559016,-!p1@Mbnl3!0.66!12.94!Mbnl3;;chr18:11052456..11052477,+!p3@Gata6!0.66!12.54!Gata6;;chr18:11052485..11052508,+!p2@Gata6!0.66!11.34!Gata6;;chr13:22036953..22037009,+!p1@Zfp184!0.66!10.75!Zfp184;;chr14:17407878..17407926,-!p1@Rarb!0.66!8.96!Rarb;;chr14:22807216..22807231,-!p3@Zfp503!0.66!6.57!Zfp503;;chr11:96147952..96147967,+!p1@Hoxb7!0.66!4.58!Hoxb7;;chr10:119913974..119913992,-!p9@Hmga2!0.66!3.58!Hmga2;;chr12:87811059..87811072,+!p3@Esrrb!0.66!3.58!Esrrb;;chr6:52195795..52195825,-!p1@Hoxa11!0.66!3.58!Hoxa11;;chr14:22807083..22807104,-!p1@Zfp503!0.65!71.06!Zfp503;;chr2:169458192..169458247,+!p1@Tshz2!0.65!35.63!Tshz2;;chr3:130813200..130813252,+!p1@Lef1!0.65!17.91!Lef1;;chr16:14705961..14705978,+!p2@Snai2!0.64!18.11!Snai2;;chr2:152223441..152223465,-!p2@Sox12!0.64!16.12!Sox12;;chr2:30700788..30700824,+!p2@Prrx2!0.64!5.57!Prrx2;;chr2:105002682..105002691,+!p10@Wt1!0.64!3.38!Wt1;;chr14:63890691..63890718,-!p8@Gata4!0.64!3.38!Gata4;;chr1:170362040..170362113,-!p2@Pbx1!0.63!30.45!Pbx1;;chr8:90483433..90483457,-!p2@Zfp423!0.63!4.58!Zfp423;;chr2:180069370..180069409,-!p1@Gata5!0.63!3.98!Gata5;;chr5:120120667..120120685,+!p3@Tbx3!0.62!6.77!Tbx3;;chr11:85646427..85646451,+!p4@Tbx2!0.62!5.97!Tbx2;;chr1:165243591..165243625,-!p2@Prrx1!0.62!5.17!Prrx1;;chr2:74583776..74583815,+!p3@Hoxd3!0.62!3.18!Hoxd3;;chr2:74549945..74549965,+!p4@Hoxd3!0.62!3.18!Hoxd3;;chr10:119913954..119913972,-!p8@Hmga2!0.62!3.18!Hmga2;;chr2:130120884..130120972,+!p1@Ebf4!0.61!21.10!Ebf4;;chr17:35031460..35031518,+!p1@Zbtb12!0.61!18.31!Zbtb12;;chr8:94325321..94325366,-!p1@Irx3!0.61!8.56!Irx3;;chr1:93698068..93698085,+!p2@Twist2!0.61!3.78!Twist2;;chr15:76287876..76287894,+!p1@Scx!0.60!19.51!Scx;;chr2:169458519..169458555,+!p2@Tshz2!0.60!14.13!Tshz2;;chr4:84321300..84321315,-!p2@Bnc2!0.60!3.78!Bnc2;;chr2:74543202..74543213,+!p3@Hoxd8!0.60!2.99!Hoxd8;;chr7:25292076..25292114,+!p4@Zfp428!0.59!9.16!Zfp428;;chr1:93698030..93698064,+!p1@Twist2!0.59!6.57!Twist2;;chr1:38684431..38684450,-!p3@Aff3!0.59!5.17!Aff3;;chr7:17642053..17642066,-!p2@Hif3a!0.59!4.38!Hif3a;;chr1:38684383..38684394,-!p4@Aff3!0.59!4.18!Aff3;;chr19:26822880..26822964,+!p2@Smarca2!0.58!28.86!Smarca2;;chr7:26067242..26067273,+!p3@Cic!0.58!14.33!Cic;;chr6:48395825..48395846,-!p3@Zfp467!0.58!12.74!Zfp467;;chr2:91864300..91864379,-!p2@Creb3l1!0.58!9.35!Creb3l1;;chr12:34642682..34642753,+!p2@Twist1!0.58!8.56!Twist1;;chr13:53568191..53568219,-!p2@Msx2!0.58!2.79!Msx2;;chr10:5734473..5734489,-!p5@Esr1!0.58!2.79!Esr1;;chr19:59533595..59533628,+!p6@Emx2!0.58!2.79!Emx2;;chr2:25562346..25562433,+!p1@Bmyc!0.57!61.70!Bmyc;;chr2:167363692..167363710,+!p1@Snai1!0.57!40.60!Snai1;;chr5:120121020..120121049,+!p1@Tbx3!0.57!20.10!Tbx3;;chr4:62626594..62626651,+!p1@Zfp618!0.57!12.34!Zfp618;;chrX:45245644..45245666,-!p2@Smarca1!0.57!10.35!Smarca1;;chr11:85646469..85646488,+!p5@Tbx2!0.57!4.38!Tbx2;;chr1:170361730..170361769,-!p7@Pbx1!0.56!6.97!Pbx1;;chr17:28487603..28487626,-!p2@Tead3!0.56!6.37!Tead3;;chr17:37140628..37140631,+!p2@Zfp57!0.56!5.97!Zfp57;;chr3:34548909..34548927,+!p1@Sox2!0.56!4.98!Sox2;;chr3:130813736..130813752,+!p3@Lef1!0.56!3.98!Lef1;;chr10:119913839..119913869,-!p7@Hmga2!0.56!3.58!Hmga2;;chr7:52472041..52472065,+!p2@Tead2!0.56!3.18!Tead2;;chr7:6683123..6683142,-!p1@Peg3!0.55!167.59!Peg3;;chr4:58956447..58956510,+!p1@Zkscan16!0.55!6.37!Zkscan16;;chr18:76219161..76219176,+!p4@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Nr2f1!0.38!1.39!Nr2f1;;chr19:59534052..59534083,+!p8@Emx2!0.38!1.39!Emx2;;chr2:30700830..30700843,+!p4@Prrx2!0.38!1.39!Prrx2;;chr19:25580272..25580305,+!p3@Dmrt1!0.38!1.39!Dmrt1;;chr9:119893782..119893802,-!p1@Csrnp1!0.38!1.39!Csrnp1;;chr9:74709695..74709722,+!p1@Onecut1!0.38!1.39!Onecut1;;chr11:96145393..96145407,+!p3@Hoxb7!0.38!1.39!Hoxb7;;chr10:5734582..5734595,-!p10@Esr1!0.38!1.39!Esr1;;chr6:52190858..52190873,-!p4@Hoxa10!0.38!1.39!Hoxa10;;chr4:84321317..84321332,-!p4@Bnc2!0.38!1.39!Bnc2;;chr4:133109285..133109308,+!p1@Nr0b2!0.38!1.39!Nr0b2;;chr2:74535796..74535808,+!p3@Hoxd9!0.38!1.39!Hoxd9;;chr1:136456791..136456810,+!p1@Kdm5b!0.37!75.23!Kdm5b;;chr3:98186361..98186443,+!p1@Zfp697!0.37!20.70!Zfp697;;chr2:165213745..165213815,-!p1@Zfp334!0.37!18.31!Zfp334;;chr4:120488308..120488366,-!p1@Nfyc!0.37!11.54!Nfyc;;chr14:100683672..100683717,-!p1@Klf12!0.37!9.35!Klf12;;chr18:84255771..84255795,-!p3@Tshz1!0.37!5.77!Tshz1;;chr7:134169741..134169760,-!p10@Maz!0.37!5.77!Maz;;chr4:128483731..128483757,-!p4@Zfp362!0.37!4.18!Zfp362;;chr18:76401074..76401118,+!p3@Smad2!0.37!4.18!Smad2;;chr4:13712168..13712218,+!p4@Runx1t1!0.37!2.79!Runx1t1;;chr12:74214394..74214422,-!p1@Six4!0.37!2.19!Six4;;chr7:30088977..30089002,+!p2@Dpf1!0.37!2.19!Dpf1;;chr15:40486427..40486437,+!p5@Zfpm2!0.37!1.99!Zfpm2;;chr4:150503457..150503498,-!p3@Camta1!0.37!1.59!Camta1;;chr4:135699731..135699747,+!p1@Id3!0.36!235.46!Id3;;chr13:29045559..29045574,-!p1@Sox4!0.36!173.56!Sox4;;chr14:47896467..47896523,-!p1@Wdhd1!0.36!24.48!Wdhd1;;chr2:154395581..154395610,-!p1@E2f1!0.36!20.50!E2f1;;chr14:52935876..52935928,-!p1@Sall2!0.36!16.32!Sall2;;chrX:137077151..137077227,-!p2@Tsc22d3!0.36!13.93!Tsc22d3;;chr16:17233653..17233683,+!p1@Hic2!0.36!12.74!Hic2;;chr6:65728988..65729056,+!p1@Prdm5!0.36!9.55!Prdm5;;chr8:72662966..72662991,-!p3@LOC100048268,p3@Rfxank!0.36!6.77!Rfxank;;chr7:19679964..19679982,+!p1@Six5!0.36!5.17!Six5;;chr6:15135456..15135520,+!p3@Foxp2!0.36!3.78!Foxp2;;chr7:135019147..135019187,-!p3@Zfp668!0.36!3.78!Zfp668;;chr14:56443698..56443726,+!p2@Nfatc4!0.36!3.18!Nfatc4;;chr17:35031589..35031630,+!p2@Zbtb12!0.36!2.99!Zbtb12;;chr8:123640063..123640077,+!p1@Foxc2!0.36!2.99!Foxc2;;chr4:54957886..54957907,+!p3@Zfp462!0.36!2.79!Zfp462;;chr4:135728181..135728203,+!p2@E2f2!0.36!1.99!E2f2;;chr15:50720589..50720600,-!p12@Trps1!0.36!1.99!Trps1;;chr2:17976799..17976829,+!p5@Mllt10!0.36!1.79!Mllt10;;chr13:15555428..15555440,+!p7@Gli3!0.36!1.59!Gli3;;chr13:56804344..56804473,+!p1@Smad5!0.35!60.71!Smad5;;chr4:82151274..82151290,-!p3@Nfib!0.35!32.64!Nfib;;chr3:14578609..14578687,+!p1@E2f5!0.35!18.71!E2f5;;chr4:102787317..102787364,+!p3@Mier1!0.35!11.15!Mier1;;chr18:11052606..11052633,+!p4@Gata6!0.35!4.38!Gata6;;chr4:97439519..97439539,+!p11@Nfia!0.35!3.58!Nfia;;chr11:69749320..69749345,+!p2@Ybx2!0.35!2.59!Ybx2;;chr10:79896129..79896163,-!p6@Tcf3!0.35!2.39!Tcf3;;chr11:52096750..52096772,-!p4@Tcf7!0.35!2.39!Tcf7;;chr5:138187411..138187422,+!p8@Tsc22d4!0.35!2.39!Tsc22d4;;chr15:102865048..102865073,+!p3@Hoxc4!0.35!1.79!Hoxc4;;chr15:50721942..50721987,-!p13@Trps1!0.35!1.59!Trps1;;chr6:6832076..6832092,-!p1@Dlx5!0.35!1.59!Dlx5;;chr16:20141134..20141213,+!p1@Yeats2!0.34!51.55!Yeats2;;chr6:48395743..48395820,-!p1@Zfp467!0.34!42.39!Zfp467;;chr5:77694479..77694574,+!p1@Rest!0.34!42.00!Rest;;chr4:97444012..97444045,+!p4@Nfia!0.34!14.53!Nfia;;chr8:81552152..81552208,+!p1@Zfp827!0.34!13.73!Zfp827;;chr2:92886297..92886329,-!p1@Prdm11!0.34!8.56!Prdm11;;chr9:63605978..63605997,-!p2@Smad3!0.34!7.17!Smad3;;chr14:17407970..17408015,-!p2@Rarb!0.34!4.58!Rarb;;chr9:63869729..63869749,-!p4@Smad6!0.34!3.18!Smad6;;chr2:115891381..115891392,-!p5@Meis2!0.34!3.18!Meis2;;chr15:40486615..40486628,+!p3@Zfpm2!0.34!2.39!Zfpm2;;chr2:92886587..92886622,-!p3@Prdm11!0.34!2.19!Prdm11;;chr15:102839912..102839938,+!p5@Hoxc6!0.34!1.19!Hoxc6;;chr13:53568081..53568094,-!p3@Msx2!0.34!1.19!Msx2;;chr15:102849395..102849404,+!p4@Hoxc4!0.34!1.19!Hoxc4;;chr15:102196745..102196769,-!p2@Sp7!0.34!1.19!Sp7;;chr12:77278238..77278252,-!p1@Esr2!0.34!1.19!Esr2;;chr15:102797225..102797243,+!p2@Hoxc10!0.34!1.19!Hoxc10;;chr2:65683842..65683856,+!p3@Csrnp3!0.34!1.19!Csrnp3;;chr2:17976830..17976848,+!p12@Mllt10!0.34!1.19!Mllt10;;chr8:87425854..87425891,+!p1@Klf1!0.34!1.19!Klf1;;chr7:89137554..89137565,-!p2@Bnc1!0.34!1.19!Bnc1;;chr6:88148324..88148328,+!p3@Gata2!0.34!1.19!Gata2;;chr6:52190668..52190682,-!p3@Hoxa10!0.34!1.19!Hoxa10;;chr11:96164821..96164865,+!p1@Hoxb5!0.34!1.19!Hoxb5;;chr11:96160068..96160084,+!p6@Hoxb6!0.34!1.19!Hoxb6;;chr11:96143962..96144035,+!p2@Hoxb8!0.34!1.19!Hoxb8;;chr11:23978291..23978323,+!p7@Bcl11a!0.34!1.19!Bcl11a;;chr9:110034519..110034606,+!p1@Smarcc1!0.33!83.99!Smarcc1;;chr5:134790507..134790546,-!p1@Gtf2i!0.33!47.37!Gtf2i;;chr18:14131126..14131211,-!p1@Zfp521!0.33!40.20!Zfp521;;chr6:116578973..116579022,-!p1@Zfp422!0.33!32.44!Zfp422;;chr17:71199121..71199165,-!p2@Tgif1!0.33!13.34!Tgif1;;chr7:88005795..88005858,+!p1@Zscan2!0.33!13.14!Zscan2;;chr16:92697560..92697592,-!p2@Runx1!0.33!11.54!Runx1;;chr1:137155026..137155042,-!p1@Elf3!0.33!10.75!Elf3;;chr6:115803364..115803407,-!p1@Mbd4!0.33!7.76!Mbd4;;chr2:25562315..25562344,+!p3@Bmyc!0.33!5.77!Bmyc;;chr18:83080305..83080335,+!p2@Zfp516!0.33!5.37!Zfp516;;chr7:134489096..134489123,-!p2@Zfp768!0.33!5.37!Zfp768;;chr3:95021799..95021840,-!p4@Gabpb2!0.33!5.17!Gabpb2;;chr15:75447162..75447217,+!p2@Zfp41!0.33!4.98!Zfp41;;chr3:30408603..30408668,-!p1@Mecom!0.33!3.78!Mecom;;chr4:54960387..54960415,+!p4@Zfp462!0.33!3.38!Zfp462;;chr2:115891427..115891441,-!p4@Meis2!0.33!3.38!Meis2;;chr12:9581284..9581303,+!p2@Osr1!0.33!2.99!Osr1;;chr6:146744563..146744594,+!p1@Arntl2!0.33!2.79!Arntl2;;chr15:100382267..100382287,-!p3@Tfcp2!0.33!2.39!Tfcp2;;chr7:19945089..19945107,+!p2@Ppp1r13l!0.33!2.39!Ppp1r13l;;chr6:64992678..64992689,+!p3@Smarcad1!0.33!2.19!Smarcad1;;chr4:135700687..135700719,+!p2@Id3!0.33!2.19!Id3;;chr5:120120981..120120992,+!p5@Tbx3!0.33!1.79!Tbx3;;chr17:44873258..44873281,-!p5@Runx2!0.33!1.79!Runx2;;chr10:80809447..80809515,-!p5@Hmg20b!0.33!1.59!Hmg20b;;chr5:120121262..120121282,+!p6@Tbx3!0.33!1.39!Tbx3;;chr10:79896360..79896400,-!p1@Tcf3!0.32!77.03!Tcf3;;chr17:31701694..31701799,+!p1@Pknox1!0.32!19.90!Pknox1;;chr7:28516417..28516460,+!p1@Zfp60!0.32!15.72!Zfp60;;chr16:4559608..4559681,-!p1@Tfap4!0.32!15.13!Tfap4;;chr17:4994904..4994953,+!p3@Arid1b!0.32!13.93!Arid1b;;chr10:62328186..62328219,-!p1@Tet1!0.32!10.75!Tet1;;chr7:49761065..49761106,-!p1@ENSMUST00000174407,p1@uc009gmb.1!0.32!9.55!Zfp141;;chr5:31754800..31754825,+!p2@Zfp512!0.32!8.96!Zfp512;;chr19:28754692..28754757,-!p1@Glis3!0.32!7.17!Glis3;;chr7:6282837..6282892,-!p1@Zfp583!0.32!6.97!Zfp583;;chr18:74376000..74376061,+!p3@Cxxc1!0.32!6.17!Cxxc1;;chr18:83080255..83080277,+!p4@Zfp516!0.32!3.98!Zfp516;;chr14:52935860..52935874,-!p3@Sall2!0.32!1.99!Sall2;;chr1:182499044..182499091,+!p1@Parp1!0.31!60.71!Parp1;;chr2:91864661..91864686,-!p1@Creb3l1!0.31!40.20!Creb3l1;;chr13:44826722..44826742,+!p1@Jarid2!0.31!29.46!Jarid2;;chr9:113840108..113840184,+!p2@Ubp1!0.31!16.72!Ubp1;;chrX:132420442..132420482,+!p2@Bhlhb9!0.31!8.96!Bhlhb9;;chr14:98569030..98569059,-!p3@Dach1!0.31!8.16!Dach1;;chr17:25707623..25707639,-!p1@Sox8!0.31!7.17!Sox8;;chrX:108810678..108810736,-!p1@Hdx!0.31!5.57!Hdx;;chr2:153475210..153475252,+!p2@Dnmt3b!0.31!4.38!Dnmt3b;;chr2:34227524..34227547,-!p2@Pbx3!0.31!2.79!Pbx3;;chr3:5218590..5218614,+!p3@Zfhx4!0.31!2.39!Zfhx4;;chr6:128312772..128312792,+!p2@Foxm1!0.31!2.39!Foxm1;;chr14:98568822..98568837,-!p5@Dach1!0.31!1.99!Dach1;;chr2:152758938..152758954,-!p2@Foxs1!0.31!1.79!Foxs1;;chr16:30065394..30065398,+!p3@Hes1!0.31!1.79!Hes1;;chr1:138845748..138845766,-!p4@Nr5a2!0.31!1.59!Nr5a2;;chr7:123174606..123174636,-!p5@Sox6!0.31!1.59!Sox6;;chr7:134169357..134169366,-!p18@Maz!0.31!1.39!Maz;;chr2:152223734..152223756,-!p6@Sox12!0.31!1.39!Sox12;;chr9:32503590..32503680,+!p1@Ets1!0.30!65.48!Ets1;;chr7:134376741..134376831,+!p1@Zfp553!0.30!23.09!Zfp553;;chr7:13063668..13063721,+!p1@Zfp606!0.30!12.14!Zfp606;;chrX:103124643..103124660,-!p2@Atrx!0.30!11.54!Atrx;;chr2:84877605..84877687,+!p3@Ssrp1!0.30!10.15!Ssrp1;;chr4:61869460..61869521,-!p1@Zfp37!0.30!8.96!Zfp37;;chr6:38204109..38204155,-!p1@D630045J12Rik!0.30!8.96!D630045J12Rik;;chr6:29476690..29476724,+!p1@Irf5!0.30!7.76!Irf5;;chr6:117813087..117813121,+!p1@Zfp239!0.30!6.17!Zfp239;;chr9:39999893..39999922,+!p1@Zfp202!0.30!5.57!Zfp202;;chr3:90097217..90097233,+!p3@Gatad2b!0.30!3.58!Gatad2b;;chr16:55966407..55966447,+!p6@Rpl24,p6@Zbtb11!0.30!3.58!Zbtb11;;chr6:47780508..47780583,-!p1@Zfp786!0.30!2.59!Zfp786;;chr7:4946990..4947016,-!p4@Zfp579!0.30!2.39!Zfp579;;chr5:125342568..125342602,+!p2@Zfp664!0.30!2.19!Zfp664;;chr18:14131020..14131033,-!p4@Zfp521!0.30!1.59!Zfp521;;chr18:69680960..69681007,+!p10@Tcf4!0.30!1.59!Tcf4;;chr1:170361678..170361689,-!p13@Pbx1!0.30!1.39!Pbx1;;chr15:50721503..50721514,-!p15@Trps1!0.30!1.39!Trps1;;chr4:154335024..154335039,+!p1@Hes5!0.30!1.39!Hes5;;chr7:91558537..91558558,-!p4@Arnt2!0.30!1.39!Arnt2;;chr7:26067803..26067814,+!p11@Cic!0.30!1.19!Cic;;chr13:40826150..40826167,-!p3@Tfap2a!0.30!1.19!Tfap2a;;chr13:53568169..53568179,-!p4@Msx2!0.30!1.00!Msx2;;chr12:12947199..12947213,-!p2@Mycn!0.30!1.00!Mycn;;chr2:164228702..164228719,+!p1@Rbpjl!0.30!1.00!Rbpjl;;chr2:104971121..104971138,+!p14@Wt1!0.30!1.00!Wt1;;chrX:55283799..55283813,+!p1@Zic3!0.30!1.00!Zic3;;chr11:96160426..96160443,+!p2@Hoxb6!0.30!1.00!Hoxb6;;chr10:5734677..5734702,-!p4@Esr1!0.30!1.00!Esr1;;chr11:96880072..96880079,+!p1@Sp6!0.30!1.00!Sp6;;chr11:45793757..45793775,+!p2@Sox30!0.30!1.00!Sox30;;chr10:119913766..119913779,-!p10@Hmga2!0.30!1.00!Hmga2;;chr8:94325779..94325791,-!p7@Irx3!0.30!1.00!Irx3;;chr9:63869510..63869530,-!p10@Smad6!0.30!1.00!Smad6;;chr9:63869918..63869936,-!p9@Smad6!0.30!1.00!Smad6;;chr7:77511928..77511937,-!p12@Nr2f2!0.30!1.00!Nr2f2;;chr6:52184880..52184893,-!p6@Hoxa10!0.30!1.00!Hoxa10;;chr7:147129659..147129668,+!p4@Utf1!0.30!1.00!Utf1;;chr5:120120834..120120845,+!p8@Tbx3!0.30!1.00!Tbx3;;chr2:74520048..74520064,+!p1@Hoxd11!0.30!1.00!Hoxd11;;chr2:7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+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0005564,UBERON:0010316,FF:0000294
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 38: / Line 44: @@
 |is_a=EFO:0002091;;FF:0011282
 |is_obsolete=
+|library_id=CNhs11044
+|library_id_phase_based=2:CNhs11044
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;1564
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;1564
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/gonad%252c%2520embryo%2520E13.CNhs11044.1564-45I6.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/gonad%252c%2520embryo%2520E13.CNhs11044.1564-45I6.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/gonad%252c%2520embryo%2520E13.CNhs11044.1564-45I6.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/gonad%252c%2520embryo%2520E13.CNhs11044.1564-45I6.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/gonad%252c%2520embryo%2520E13.CNhs11044.1564-45I6.mm9.nobarcode.rdna.fa.gz
 |name=gonad, embryo E13
 |namespace=FANTOM5
@@ Line 43: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11044,LSID732,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|repeat_enrich_byfamily=0.00937414145369765,0,0,0,0,0.0751579396487663,0.0845571016545415,0,0.0394157974199537,0,0,0.329341686133101,0,0,0,0,0.0394157974199537,0,0.253914471851947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353545821992186,0,0,0,0,0.0172757434387543,0.199176412994243,0.0539704430898953,0.0306394358636684,0.588930376076319,0.109117590904221,0.0788315948399074,0,0,0,0,0,0,0,0,0,0.0788315948399074,0,0.137327323636828,0.0788315948399074,0,0,0,0,0,0,0,0,0.0556544783988552,0.186325040592419,0.219345451475655,-0.0792594479311751,0.194536679014068,0,0.0788315948399074,0.0205262660153893,0.00963665856118168,0.0788315948399074,0,0.0822002067900252,-0.030778755401865,-0.150107058006048,0,0,0,0,0,0,0.145528461145601,0.00600486556276114,0.129041404517036,-0.0264001120088066,0.0470921111779671,0,0,0,0
 |rna_box=45
 |rna_catalog_number=
@@ Line 58: / Line 76: @@
 |rna_weight_ug=
 |sample_age=
+|sample_category=developmental
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 78: / Line 97: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:1564-45I6;search_select_hide=table117:1564-45I6
 }}

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FF:1564-45I6: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:08, 4 June 2020

CNhs11044

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0