FFCP PHASE1:Hg19::chr1:2066387..2066399,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5590 | |EntrezGene=5590 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9412 | |HGNC=9412 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2H9 | |UniProt=F2Z2H9 | ||
|association_with_transcript=-29bp_to_ENST00000497183_5end | |association_with_transcript=-29bp_to_ENST00000497183_5end | ||
|cluster_id=chr1:2066387..2066399,+ | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_27_at_PRKCZ_5end | |description=CAGE_peak_27_at_PRKCZ_5end | ||
|id=chr1:2066387..2066399,+ | |id=chr1:2066387..2066399,+ | ||
|ontology_enrichment_celltype=CL:0000182;2.11e-30;12!CL:0000138;6.13e-08;6 | |ontology_enrichment_celltype=CL:0002536!3.51e-11!2;CL:0000708!3.56e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;2.11e-30;12!CL:0000138;6.13e-08;6 | ||
|ontology_enrichment_disease=DOID:7;2.08e-10;39 | |ontology_enrichment_celltype_v019_2=CL:0000182,2.22e-30,12;CL:0000058,5.92e-08,6;CL:0000138,5.92e-08,6;CL:0000223,6.02e-07,58 | ||
|ontology_enrichment_uberon=UBERON:0002107;8.70e-34;19!UBERON:0006925;8.70e-34;19!UBERON:0002423;6.76e-26;25!UBERON:0002365;5.15e-19;31!UBERON:0002330;5.15e-19;31!UBERON:0002368;5.20e-19;33!UBERON:0000949;1.40e-12;43!UBERON:0002417;3.56e-08;58!UBERON:0000916;3.56e-08;58!UBERON:0002530;1.09e-07;57!UBERON:0005172;1.10e-07;52!UBERON:0005173;1.10e-07;52 | |ontology_enrichment_development_v019=UBERON:0004161;1.24e-57;11!UBERON:0009497;6.30e-49;13!UBERON:0001041;1.01e-21;30!UBERON:0003104;8.07e-21;31 | ||
|ontology_enrichment_disease=DOID:1909!2.11e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:7;2.08e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.72e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0000305!6.07e-12!7;UBERON:0001870!8.23e-11!2;UBERON:0004871!1.85e-10!8;UBERON:0005631!5.65e-09!14;UBERON:0000158!5.65e-09!14;UBERON:0000200!5.57e-08!6;UBERON:0003210!3.56e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.70e-34;19!UBERON:0006925;8.70e-34;19!UBERON:0002423;6.76e-26;25!UBERON:0002365;5.15e-19;31!UBERON:0002330;5.15e-19;31!UBERON:0002368;5.20e-19;33!UBERON:0000949;1.40e-12;43!UBERON:0002417;3.56e-08;58!UBERON:0000916;3.56e-08;58!UBERON:0002530;1.09e-07;57!UBERON:0005172;1.10e-07;52!UBERON:0005173;1.10e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.08e-34,19;UBERON:0006925,9.08e-34,19;UBERON:0008836,9.08e-34,19;UBERON:0008835,2.73e-29,22;UBERON:0003894,2.73e-29,22;UBERON:0009854,4.68e-28,23;UBERON:0007499,6.98e-26,25;UBERON:0009497,6.98e-26,25;UBERON:0000015,6.98e-26,25;UBERON:0002423,6.98e-26,25;UBERON:0006235,6.98e-26,25;UBERON:0004161,6.98e-26,25;UBERON:0009856,6.39e-25,26;UBERON:0002365,4.87e-21,31;UBERON:0002330,4.87e-21,31;UBERON:0002368,9.96e-19,35;UBERON:0000949,9.73e-15,45;UBERON:0003929,2.11e-12,54;UBERON:0005172,2.11e-12,54;UBERON:0005173,2.11e-12,54;UBERON:0002530,2.07e-11,59;UBERON:0002417,3.12e-11,60;UBERON:0000916,3.12e-11,60;UBERON:0005911,2.17e-08,82;UBERON:0001041,6.09e-08,87;UBERON:0005177,6.41e-07,101 | |||
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|short_description=p27@PRKCZ | |short_description=p27@PRKCZ | ||
}} | }} |
Latest revision as of 04:41, 20 September 2015
Short description: | p27@PRKCZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_PRKCZ_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -29bp_to_ENST00000497183_5end |
EntrezGene: | PRKCZ |
HGNC: | 9412 |
UniProt: | F2Z2H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.22e-30 | 12 |
chondroblast | 5.92e-08 | 6 |
chondrocyte | 5.92e-08 | 6 |
endodermal cell | 6.02e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 9.08e-34 | 19 |
digestive gland | 9.08e-34 | 19 |
liver bud | 9.08e-34 | 19 |
hepatic diverticulum | 2.73e-29 | 22 |
liver primordium | 2.73e-29 | 22 |
digestive tract diverticulum | 4.68e-28 | 23 |
epithelial sac | 6.98e-26 | 25 |
epithelium of foregut-midgut junction | 6.98e-26 | 25 |
anatomical boundary | 6.98e-26 | 25 |
hepatobiliary system | 6.98e-26 | 25 |
foregut-midgut junction | 6.98e-26 | 25 |
septum transversum | 6.98e-26 | 25 |
sac | 6.39e-25 | 26 |
exocrine gland | 4.87e-21 | 31 |
exocrine system | 4.87e-21 | 31 |
endocrine gland | 9.96e-19 | 35 |
endocrine system | 9.73e-15 | 45 |
gut epithelium | 2.11e-12 | 54 |
abdomen element | 2.11e-12 | 54 |
abdominal segment element | 2.11e-12 | 54 |
gland | 2.07e-11 | 59 |
abdominal segment of trunk | 3.12e-11 | 60 |
abdomen | 3.12e-11 | 60 |
endo-epithelium | 2.17e-08 | 82 |
foregut | 6.09e-08 | 87 |
trunk region element | 6.41e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.72e-10 | 39 |