FFCP PHASE1:Hg19::chr10:5567644..5567657,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5567644..5567657,+ | |||
|coexpression_cluster_id=C3027 | |coexpression_cluster_id=C3027 | ||
|description=CAGE_peak_at_chr10:5567644..5567657,+ | |description=CAGE_peak_at_chr10:5567644..5567657,+ | ||
|id=chr10:5567644..5567657,+ | |id=chr10:5567644..5567657,+ | ||
|ontology_enrichment_celltype=CL:0002621;5.59e-53;3!CL:0002231;1.40e-14;3!CL:0002327;3.26e-11;4!CL:0002251;6.55e-09;20!CL:0002076;7.95e-09;42 | |ontology_enrichment_celltype=CL:0002621!4.19e-23!3;CL:0002159!1.34e-13!13;CL:0002076!2.34e-12!43;CL:0002231!7.49e-11!3;CL:0002166!3.31e-10!3;CL:0000223!1.26e-08!59;CL:0002327!3.18e-08!4 | ||
| | |ontology_enrichment_celltype_v019=CL:0002621;5.59e-53;3!CL:0002231;1.40e-14;3!CL:0002327;3.26e-11;4!CL:0002251;6.55e-09;20!CL:0002076;7.95e-09;42 | ||
|ontology_enrichment_disease=DOID:3151;6.62e-41;1!DOID:3149;6.62e-41;1!DOID:3451;3.11e-21;2!DOID:4159;3.11e-21;2!DOID:0060122;3.11e-21;2 | |ontology_enrichment_celltype_v019_2=CL:0002621,4.89e-53,3;CL:0002231,1.40e-14,3;CL:0002327,3.42e-11,4;CL:0002076,2.74e-09,42;CL:0002251,6.42e-09,20;CL:0000223,6.27e-07,58 | ||
|ontology_enrichment_uberon=UBERON:0001949;5.59e-53;3!UBERON:0003929;1.91e-23;7!UBERON:0003350;1.15e-20;8!UBERON:0001828;1.15e-20;8!UBERON:0000486;3.71e-14;12!UBERON:0003729;3.76e-13;13!UBERON:0000014;2.53e-11;4!UBERON:0001911;3.26e-11;4!UBERON:0000161;2.51e-09;19!UBERON:0000166;2.51e-09;19!UBERON:0000344;6.55e-09;20!UBERON:0004807;3.45e-08;22 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3151!5.59e-09!1;DOID:3149!5.59e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;6.62e-41;1!DOID:3149;6.62e-41;1!DOID:3451;3.11e-21;2!DOID:4159;3.11e-21;2!DOID:0060122;3.11e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,6.62e-41,1;DOID:3149,6.62e-41,1;DOID:3451,3.11e-21,2;DOID:4159,3.11e-21,2;DOID:0060122,3.11e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!4.19e-23!3;UBERON:0000166!3.31e-16!21;UBERON:0001829!1.67e-15!2;UBERON:0000161!1.68e-15!35;UBERON:0001004!4.24e-12!72;UBERON:0000165!5.96e-12!28;UBERON:0000930!5.96e-12!28;UBERON:0003408!1.88e-11!10;UBERON:0000974!1.99e-11!10;UBERON:0003102!1.47e-10!95;UBERON:0001828!5.44e-09!8;UBERON:0004807!8.18e-09!28;UBERON:0001831!1.18e-08!1;UBERON:0001567!1.18e-08!1;UBERON:0008801!1.18e-08!1;UBERON:0001444!1.43e-08!48;UBERON:0001736!1.48e-08!1;UBERON:0006298!1.48e-08!1;UBERON:0002530!1.75e-08!59;UBERON:0001911!3.18e-08!4;UBERON:0005333!3.18e-08!4;UBERON:0008425!3.18e-08!4;UBERON:0005311!3.18e-08!4;UBERON:0000997!3.28e-08!1;UBERON:0005056!3.28e-08!1;UBERON:0002372!3.53e-08!1;UBERON:0001961!3.53e-08!1;UBERON:0001744!3.53e-08!1;UBERON:0001735!3.53e-08!1;UBERON:0001708!7.19e-08!4;UBERON:0001704!7.19e-08!4;UBERON:0002370!9.85e-08!4;UBERON:0005058!9.85e-08!4;UBERON:0009113!9.85e-08!4;UBERON:0003295!9.85e-08!4;UBERON:0005562!9.85e-08!4;UBERON:0000153!8.89e-07!129;UBERON:0007811!8.89e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;5.59e-53;3!UBERON:0003929;1.91e-23;7!UBERON:0003350;1.15e-20;8!UBERON:0001828;1.15e-20;8!UBERON:0000486;3.71e-14;12!UBERON:0003729;3.76e-13;13!UBERON:0000014;2.53e-11;4!UBERON:0001911;3.26e-11;4!UBERON:0000161;2.51e-09;19!UBERON:0000166;2.51e-09;19!UBERON:0000344;6.55e-09;20!UBERON:0004807;3.45e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.89e-53,3;UBERON:0003350,1.10e-20,8;UBERON:0001828,1.10e-20,8;UBERON:0003729,3.64e-13,13;UBERON:0000014,2.53e-11,4;UBERON:0001911,3.42e-11,4;UBERON:0005333,3.42e-11,4;UBERON:0008425,3.42e-11,4;UBERON:0005311,3.42e-11,4;UBERON:0000161,1.05e-10,36;UBERON:0000344,6.42e-09,20;UBERON:0000166,3.39e-08,22;UBERON:0003929,2.17e-07,54;UBERON:0003102,4.61e-07,99 | |||
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|short_description=p@chr10:5567644..5567657,+ | |short_description=p@chr10:5567644..5567657,+ | ||
}} | }} |
Latest revision as of 14:13, 23 July 2015
Short description: | p@chr10:5567644..5567657, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5567644..5567657, + |
Coexpression cluster: | C3027_Mammary_keratoacanthoma_Gingival_Prostate_tongue_esophagus_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.89e-53 | 3 |
epithelial cell of prostate | 1.40e-14 | 3 |
mammary gland epithelial cell | 3.42e-11 | 4 |
endo-epithelial cell | 2.74e-09 | 42 |
epithelial cell of alimentary canal | 6.42e-09 | 20 |
endodermal cell | 6.27e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.89e-53 | 3 |
epithelium of mucosa | 1.10e-20 | 8 |
gingiva | 1.10e-20 | 8 |
mouth mucosa | 3.64e-13 | 13 |
zone of skin | 2.53e-11 | 4 |
mammary gland | 3.42e-11 | 4 |
mammary bud | 3.42e-11 | 4 |
mammary ridge | 3.42e-11 | 4 |
mammary placode | 3.42e-11 | 4 |
orifice | 1.05e-10 | 36 |
mucosa | 6.42e-09 | 20 |
oral opening | 3.39e-08 | 22 |
gut epithelium | 2.17e-07 | 54 |
surface structure | 4.61e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 6.62e-41 | 1 |
keratoacanthoma | 6.62e-41 | 1 |
skin carcinoma | 3.11e-21 | 2 |
skin cancer | 3.11e-21 | 2 |
integumentary system cancer | 3.11e-21 | 2 |