FFCP PHASE1:Hg19::chr12:12966317..12966330,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51202 | |EntrezGene=51202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18682 | |HGNC=18682 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000542123_5end | |association_with_transcript=25bp_to_ENST00000542123_5end | ||
|cluster_id=chr12:12966317..12966330,+ | |||
|description=CAGE_peak_2_at_DDX47_5end | |description=CAGE_peak_2_at_DDX47_5end | ||
|id=chr12:12966317..12966330,+ | |id=chr12:12966317..12966330,+ | ||
|ontology_enrichment_celltype=CL:0000359;2.21e-10;32!CL:0000077;5.82e-09;19!CL:0000192;1.57e-08;43 | |ontology_enrichment_celltype=CL:0000548!4.71e-27!679;CL:0000004!4.71e-27!679;CL:0000255!4.71e-27!679;CL:0000012!6.02e-27!682;CL:0000003!1.90e-18!722;CL:0000066!7.80e-17!254;CL:0002321!4.50e-15!248;CL:0000220!9.28e-15!246;CL:0000144!1.86e-13!625;CL:0000222!4.25e-11!119;CL:0000192!5.78e-11!42;CL:0000514!5.78e-11!42;CL:0000063!2.22e-10!578;CL:0000359!1.40e-09!32;CL:0000055!1.46e-09!180;CL:0000076!1.57e-09!62;CL:0000187!1.58e-09!54;CL:0000393!1.84e-09!60;CL:0000211!1.84e-09!60;CL:0000680!2.14e-09!57;CL:0000056!2.14e-09!57;CL:0000355!2.14e-09!57;CL:0002371!2.19e-08!591;CL:0000183!6.03e-08!59;CL:0000077!7.15e-08!19 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;2.21e-10;32!CL:0000077;5.82e-09;19!CL:0000192;1.57e-08;43 | ||
|ontology_enrichment_disease=DOID:1749;5.07e-08;14 | |ontology_enrichment_celltype_v019_2=CL:0000066,9.46e-18,253;CL:0002321,2.04e-15,250;CL:0000192,2.20e-12,43;CL:0000514,2.20e-12,43;CL:0000359,3.59e-11,32;CL:0000222,7.33e-11,121;CL:0000187,3.55e-10,55;CL:0000680,6.05e-10,58;CL:0000056,6.05e-10,58;CL:0000355,6.05e-10,58;CL:0000393,1.38e-09,61;CL:0000211,1.38e-09,61;CL:0000076,1.54e-09,63;CL:0000077,4.46e-09,19 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0000514;1.57e-08;43 | ||
|ontology_enrichment_disease=DOID:305!8.81e-11!106;DOID:0050687!1.68e-08!143;DOID:14566!2.15e-08!239;DOID:162!1.74e-07!235;DOID:1749!5.74e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.07e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.89e-10,106;DOID:0050687,4.80e-08,143;DOID:1749,8.90e-08,14;DOID:14566,2.24e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.25e-08!42;UBERON:0003509!1.25e-08!42;UBERON:0004572!1.25e-08!42;UBERON:0001134!1.02e-07!61;UBERON:0002036!1.02e-07!61;UBERON:0003082!1.02e-07!61;UBERON:0000490!1.41e-07!138;UBERON:0002385!3.11e-07!63;UBERON:0001015!3.11e-07!63;UBERON:0000383!3.11e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.29e-09,42;UBERON:0003509,3.29e-09,42;UBERON:0004572,3.29e-09,42;UBERON:0001134,3.04e-08,62;UBERON:0002036,3.04e-08,62;UBERON:0003082,3.04e-08,62;UBERON:0002385,1.68e-07,64;UBERON:0001015,1.68e-07,64;UBERON:0000383,1.68e-07,64;UBERON:0000490,5.04e-07,148;UBERON:0004573,6.21e-07,33;UBERON:0004571,6.21e-07,33 | |||
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| ||
|short_description=p2@DDX47 | |short_description=p2@DDX47 | ||
}} | }} |
Latest revision as of 08:00, 17 September 2015
Short description: | p2@DDX47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDX47_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000542123_5end |
EntrezGene: | DDX47 |
HGNC: | 18682 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.46e-18 | 253 |
embryonic cell | 2.04e-15 | 250 |
smooth muscle cell | 2.20e-12 | 43 |
smooth muscle myoblast | 2.20e-12 | 43 |
vascular associated smooth muscle cell | 3.59e-11 | 32 |
mesodermal cell | 7.33e-11 | 121 |
muscle cell | 3.55e-10 | 55 |
muscle precursor cell | 6.05e-10 | 58 |
myoblast | 6.05e-10 | 58 |
multi-potent skeletal muscle stem cell | 6.05e-10 | 58 |
electrically responsive cell | 1.38e-09 | 61 |
electrically active cell | 1.38e-09 | 61 |
squamous epithelial cell | 1.54e-09 | 63 |
mesothelial cell | 4.46e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
artery | 3.29e-09 | 42 |
arterial blood vessel | 3.29e-09 | 42 |
arterial system | 3.29e-09 | 42 |
skeletal muscle tissue | 3.04e-08 | 62 |
striated muscle tissue | 3.04e-08 | 62 |
myotome | 3.04e-08 | 62 |
muscle tissue | 1.68e-07 | 64 |
musculature | 1.68e-07 | 64 |
musculature of body | 1.68e-07 | 64 |
unilaminar epithelium | 5.04e-07 | 148 |
systemic artery | 6.21e-07 | 33 |
systemic arterial system | 6.21e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.89e-10 | 106 |
cell type cancer | 4.80e-08 | 143 |
squamous cell carcinoma | 8.90e-08 | 14 |
disease of cellular proliferation | 2.24e-07 | 239 |