FFCP PHASE1:Hg19::chr12:122296755..122296770,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3242 | |EntrezGene=3242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5147 | |HGNC=5147 | ||
|TSSclassifier=strong | |||
|UniProt=P32754 | |UniProt=P32754 | ||
|association_with_transcript=0bp_to_ENST00000289004,ENST00000535114,NM_002150,uc001ubj.2_5end | |association_with_transcript=0bp_to_ENST00000289004,ENST00000535114,NM_002150,uc001ubj.2_5end | ||
|cluster_id=chr12:122296755..122296770,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_HPD_5end | |description=CAGE_peak_1_at_HPD_5end | ||
|id=chr12:122296755..122296770,- | |id=chr12:122296755..122296770,- | ||
|ontology_enrichment_celltype=CL:0000182;1.97e-10;12!CL:0000153;7.86e-08;9!CL:0000447;7.86e-08;9!CL:0000327;2.83e-07;15 | |ontology_enrichment_celltype=CL:0000181!7.84e-08!12;CL:0000417!7.84e-08!12;CL:0000668!7.84e-08!12;CL:0000414!7.84e-08!12;CL:0000412!7.84e-08!12;CL:0000182!7.84e-08!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;1.97e-10;12!CL:0000153;7.86e-08;9!CL:0000447;7.86e-08;9!CL:0000327;2.83e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.91e-10,12;CL:0000153,6.69e-08,9;CL:0000447,6.69e-08,9;CL:0000327,2.50e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.26e-09;11!UBERON:0009497;3.35e-07;13!UBERON:0003104;8.45e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002107;9.03e-19;19!UBERON:0006925;9.03e-19;19!UBERON:0001737;9.01e-15;9!UBERON:0001557;9.01e-15;9!UBERON:0002423;2.74e-13;25!UBERON:0002368;6.05e-10;33!UBERON:0002365;1.22e-09;31!UBERON:0002330;1.22e-09;31!UBERON:0001896;2.90e-07;3!UBERON:0005290;2.90e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.05e-12!19;UBERON:0006925!6.05e-12!19;UBERON:0008836!6.05e-12!19;UBERON:0007023!4.06e-11!115;UBERON:0009854!8.91e-11!23;UBERON:0005057!1.29e-10!26;UBERON:0008835!1.93e-10!22;UBERON:0003894!1.93e-10!22;UBERON:0009497!2.85e-10!25;UBERON:0000015!2.85e-10!25;UBERON:0002423!2.85e-10!25;UBERON:0006235!2.85e-10!25;UBERON:0004161!2.85e-10!25;UBERON:0000481!9.30e-10!347;UBERON:0002417!1.16e-09!61;UBERON:0000916!1.16e-09!61;UBERON:0000475!7.92e-09!365;UBERON:0009856!9.05e-09!26;UBERON:0007499!1.96e-08!25;UBERON:0001048!1.97e-08!168;UBERON:0001737!1.99e-08!9;UBERON:0000477!2.35e-08!286;UBERON:0003135!3.05e-08!11;UBERON:0005172!6.33e-08!55;UBERON:0005173!6.33e-08!55;UBERON:0002368!5.01e-07!35;UBERON:0005743!9.27e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.03e-19;19!UBERON:0006925;9.03e-19;19!UBERON:0001737;9.01e-15;9!UBERON:0001557;9.01e-15;9!UBERON:0002423;2.74e-13;25!UBERON:0002368;6.05e-10;33!UBERON:0002365;1.22e-09;31!UBERON:0002330;1.22e-09;31!UBERON:0001896;2.90e-07;3!UBERON:0005290;2.90e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.83e-19,19;UBERON:0006925,8.83e-19,19;UBERON:0008836,8.83e-19,19;UBERON:0008835,1.17e-15,22;UBERON:0003894,1.17e-15,22;UBERON:0001737,5.15e-15,9;UBERON:0009854,8.43e-15,23;UBERON:0007499,2.70e-13,25;UBERON:0009497,2.70e-13,25;UBERON:0000015,2.70e-13,25;UBERON:0002423,2.70e-13,25;UBERON:0006235,2.70e-13,25;UBERON:0004161,2.70e-13,25;UBERON:0009856,1.24e-12,26;UBERON:0001048,5.28e-10,160;UBERON:0002365,5.68e-10,31;UBERON:0002330,5.68e-10,31;UBERON:0002368,1.36e-09,35;UBERON:0005172,7.03e-09,54;UBERON:0005173,7.03e-09,54;UBERON:0002417,1.83e-08,60;UBERON:0000916,1.83e-08,60;UBERON:0001041,4.05e-08,87;UBERON:0001896,2.83e-07,3;UBERON:0005290,2.83e-07,3;UBERON:0010096,2.83e-07,3 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.704772020479856,0,3.5756887554183,2.61701557230111,5.06599756336621,0,1.56711376919903,0,0,0,0,3.09415882400117,4.63956326019082,0,0,0,0,2.70866327768933,2.04000691244253,0.940364164434263,1.71741592278634,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,27.8308147336116,48.1284394210454,36.2116297402059,0,28.7114573478555,1.51255707462509,0,0.614843499851882,86.7736375172346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0.286836620748814,0.709336764396714,0.560677600142307,0,0,1.55605517699883,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,1.42907919878425,0,1.65321249881225,0,0,4.55080680969013,1.43723628363248,0.336672227908132,0,0.554128230968366,0,0,0.300476117813194,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0.194874010322397,0,0,0.646584227275248,0,0.10075209822764,0.169560592310488,0,0,0,0.853815942907168,0.397589304964456,0.348581828608555,1.45125477021519,1.00928340350251,1.09493207722749,0,0,0,0,0,1.8929088006375,3.20310911148393,2.41011029883482,2.75734931830985,1.74303555273925,2.37270619111097,2.96628877952362,3.33576490713088,1.15424147083917,0.738155454624648,0,3.2925920906512,1.47008711385542,1415.85373895985,343.006698620491,630.372830429058,0,0,1.02940686179115,0,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,10.4373935370448,109.609564289071,9.05564370458846,0,11.3725423597615,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,11.6556917133183,0,0,0,0,0,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0.640695746278505,0.511707249066704,0.482561763430822,7.42090332224955,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0,0,0.182091168006717,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0.219259876645935,0,4.35965212697862,2.62411716559765,2.92840555197873,988.678506759895,0,0,0,0,4.82051789532479,0,0.770243085573222,1.5350367472613,0,0.537101224341368,1.30515024522806,0.340906509664404,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,1.02359116524534,0,0.318203247925937,0,0.899362287916574,1.09814811894422,1.06031162111118,0,0,0,1.46290121726877,0,0,0,0,0,1.65409603063837,0.66343897524122,0,3.47265320560013,0,0,0,0,0.430234056612155,0,0,0,18.5774719061944,1.64647446479951,0,0,0,0,0,1002.25490306959,0,0,0,0,0,0,0,0,0,0,0,0,4.80708320073629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,1.63629892003448,0,0,0,0.179021174675609,0,0.493217028184668,0,0,18.4173221758092,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,9.43357207762082,251.756789192386,0,0.230850775511391,1.48124672601102,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,11.9974016705605,0,0.937057782901357,0,0,0,1.57833761139756,0,0,8.4038150905889,0,0,0,0,0,0,5.97680046662565,0,0.347119476670262,0,0,2.27144668714639,0,0.967563312890852,1.09633975629278,1.31384731285135,0.193978032976839,0,1.58186518546373,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0.372757606696298,0,0.271808412147228,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,1.60412296808179,0,1.19807400299395,0.858452096273142,0,0.0671834724867263,0,20.9692709149417,89.3401287363916,87.3608098840364,95.1064003782549,0,0,0.795229689809303,2.45166131000836,0.482259445395058,0.137539436597234,0,0,0,0.242998226632099,0,68.2457425211056,37.0329392233087,0,0,0,1.42939065274673,0,9.66220443088049,0,0.864221491201268,0,0,0,0.340776043570843,0,1352.6771168487,398.845735625786,0.387848869084652,0.13223260174269,2.9084762440336,0,0.213574825135389,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0.157054096250234,0,0.122026264901963,0,114.108429942324,38.7142389863615,9.7491352617972,0.691743174681154,0.124980407962107,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0.151230923763239,0,0.443565449968902,0.159296767163702,0.449803112163605,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,5.26281718988897,0,0.38582807654183,0.168942440653073,0,1.72715170865599,0,0,0,0,0,0,27.7723386891703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0.256916900385838,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,2.25630985047772,0,0.781514011233092,0,0,0,0.4052255077103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| ||
|short_description=p1@HPD | |short_description=p1@HPD | ||
}} | }} |
Latest revision as of 23:14, 16 September 2015
Short description: | p1@HPD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HPD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000289004, ENST00000535114, NM_002150, uc001ubj.2_5end |
EntrezGene: | HPD |
HGNC: | 5147 |
UniProt: | P32754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.91e-10 | 12 |
GAG secreting cell | 6.69e-08 | 9 |
carbohydrate secreting cell | 6.69e-08 | 9 |
extracellular matrix secreting cell | 2.50e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
liver | 8.83e-19 | 19 |
digestive gland | 8.83e-19 | 19 |
liver bud | 8.83e-19 | 19 |
hepatic diverticulum | 1.17e-15 | 22 |
liver primordium | 1.17e-15 | 22 |
larynx | 5.15e-15 | 9 |
digestive tract diverticulum | 8.43e-15 | 23 |
epithelial sac | 2.70e-13 | 25 |
epithelium of foregut-midgut junction | 2.70e-13 | 25 |
anatomical boundary | 2.70e-13 | 25 |
hepatobiliary system | 2.70e-13 | 25 |
foregut-midgut junction | 2.70e-13 | 25 |
septum transversum | 2.70e-13 | 25 |
sac | 1.24e-12 | 26 |
primordium | 5.28e-10 | 160 |
exocrine gland | 5.68e-10 | 31 |
exocrine system | 5.68e-10 | 31 |
endocrine gland | 1.36e-09 | 35 |
abdomen element | 7.03e-09 | 54 |
abdominal segment element | 7.03e-09 | 54 |
abdominal segment of trunk | 1.83e-08 | 60 |
abdomen | 1.83e-08 | 60 |
foregut | 4.05e-08 | 87 |
medulla oblongata | 2.83e-07 | 3 |
myelencephalon | 2.83e-07 | 3 |
future myelencephalon | 2.83e-07 | 3 |