FFCP PHASE1:Hg19::chr12:49110458..49110567,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=904 | |EntrezGene=904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1599 | |HGNC=1599 | ||
|TSSclassifier=strong | |||
|UniProt=A9XU13 | |UniProt=A9XU13 | ||
|association_with_transcript=0bp_to_ENST00000417344_5end | |association_with_transcript=0bp_to_ENST00000417344_5end | ||
|cluster_id=chr12:49110458..49110567,- | |||
|description=CAGE_peak_1_at_CCNT1_5end | |description=CAGE_peak_1_at_CCNT1_5end | ||
|id=chr12:49110458..49110567,- | |id=chr12:49110458..49110567,- | ||
|ontology_enrichment_celltype=CL:0000542;2.20e-09;53!CL:0000084;2.02e-08;25!CL:0000791;2.36e-07;18!CL:0000789;2.36e-07;18!CL:0002419;2.36e-07;18!CL:0000945;4.60e-07;24 | |ontology_enrichment_celltype=CL:0000037!7.41e-23!172;CL:0000566!7.41e-23!172;CL:0000738!3.04e-21!140;CL:0002032!3.17e-20!165;CL:0000837!3.17e-20!165;CL:0000988!3.58e-20!182;CL:0000542!4.56e-16!53;CL:0000051!4.56e-16!53;CL:0000838!8.41e-16!52;CL:0002087!3.27e-15!119;CL:0002031!4.65e-15!124;CL:0000084!2.05e-08!25;CL:0000827!2.05e-08!25;CL:0000791!2.63e-07!18;CL:0000789!2.63e-07!18;CL:0002420!2.63e-07!18;CL:0002419!2.63e-07!18;CL:0000790!2.63e-07!18;CL:0000763!3.23e-07!112;CL:0000049!3.23e-07!112;CL:0000945!5.09e-07!24;CL:0000826!5.09e-07!24 | ||
| | |ontology_enrichment_celltype_v019=CL:0000542;2.20e-09;53!CL:0000084;2.02e-08;25!CL:0000791;2.36e-07;18!CL:0000789;2.36e-07;18!CL:0002419;2.36e-07;18!CL:0000945;4.60e-07;24 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000037,4.68e-22,168;CL:0000738,1.80e-20,136;CL:0000988,5.35e-20,177;CL:0002032,1.87e-19,161;CL:0000837,1.87e-19,161;CL:0000542,4.56e-16,53;CL:0000051,4.56e-16,53;CL:0000838,8.41e-16,52;CL:0002087,1.67e-14,115;CL:0002031,2.37e-14,120;CL:0000084,2.05e-08,25;CL:0000827,2.05e-08,25;CL:0000791,2.63e-07,18;CL:0000789,2.63e-07,18;CL:0002420,2.63e-07,18;CL:0002419,2.63e-07,18;CL:0000790,2.63e-07,18;CL:0000945,5.09e-07,24;CL:0000826,5.09e-07,24 | ||
|ontology_enrichment_development_v019=CL:0000051;2.20e-09;53!CL:0000790;2.36e-07;18 | |||
|ontology_enrichment_disease=DOID:162!1.78e-13!235;DOID:14566!3.49e-13!239;DOID:0050687!1.66e-09!143;DOID:305!1.50e-08!106;DOID:0050686!8.18e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.79e-13,235;DOID:14566,3.50e-13,239;DOID:0050687,1.66e-09,143;DOID:305,1.50e-08,106;DOID:0050686,8.18e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CCNT1 | |short_description=p1@CCNT1 | ||
}} | }} |
Latest revision as of 14:11, 18 September 2015
Short description: | p1@CCNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCNT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417344_5end |
EntrezGene: | CCNT1 |
HGNC: | 1599 |
UniProt: | A9XU13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.68e-22 | 168 |
leukocyte | 1.80e-20 | 136 |
hematopoietic cell | 5.35e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.87e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-19 | 161 |
lymphocyte | 4.56e-16 | 53 |
common lymphoid progenitor | 4.56e-16 | 53 |
lymphoid lineage restricted progenitor cell | 8.41e-16 | 52 |
nongranular leukocyte | 1.67e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 2.37e-14 | 120 |
T cell | 2.05e-08 | 25 |
pro-T cell | 2.05e-08 | 25 |
mature alpha-beta T cell | 2.63e-07 | 18 |
alpha-beta T cell | 2.63e-07 | 18 |
immature T cell | 2.63e-07 | 18 |
mature T cell | 2.63e-07 | 18 |
immature alpha-beta T cell | 2.63e-07 | 18 |
lymphocyte of B lineage | 5.09e-07 | 24 |
pro-B cell | 5.09e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.79e-13 | 235 |
disease of cellular proliferation | 3.50e-13 | 239 |
cell type cancer | 1.66e-09 | 143 |
carcinoma | 1.50e-08 | 106 |
organ system cancer | 8.18e-07 | 137 |