FFCP PHASE1:Hg19::chr6:108581708..108581720,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:108581708..108581720,+ | |||
|coexpression_cluster_id=C3798 | |coexpression_cluster_id=C3798 | ||
|description=CAGE_peak_at_chr6:108581708..108581720,+ | |description=CAGE_peak_at_chr6:108581708..108581720,+ | ||
|id=chr6:108581708..108581720,+ | |id=chr6:108581708..108581720,+ | ||
|ontology_enrichment_celltype=CL:0000097;3.24e-36;5!CL:0000163;1.73e-20;9 | |ontology_enrichment_celltype=CL:0000839!9.50e-13!70;CL:0000557!1.71e-12!71;CL:0002057!4.30e-12!42;CL:0000766!2.52e-11!76;CL:0000860!4.93e-11!45;CL:0002274!2.76e-10!5;CL:0000457!2.76e-10!5;CL:0002191!2.76e-10!5;CL:0000097!2.76e-10!5;CL:0000831!2.76e-10!5;CL:0002028!2.76e-10!5;CL:0002194!7.20e-09!63;CL:0000576!7.20e-09!63;CL:0000040!7.20e-09!63;CL:0000559!7.20e-09!63;CL:0002009!1.78e-08!65 | ||
| | |ontology_enrichment_celltype_v019=CL:0000097;3.24e-36;5!CL:0000163;1.73e-20;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.55e-36,5;CL:0002028,2.55e-36,5;CL:0000163,1.52e-20,9;CL:0000839,1.40e-10,66;CL:0000557,2.00e-10,67;CL:0000766,1.06e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000996;1.88e-21;1 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.72e-13!57;UBERON:0005068!9.72e-13!57;UBERON:0006241!9.72e-13!57;UBERON:0007135!9.72e-13!57;UBERON:0007023!1.37e-12!115;UBERON:0002020!2.98e-11!34;UBERON:0003528!2.98e-11!34;UBERON:0002298!3.12e-11!8;UBERON:0002616!9.28e-11!59;UBERON:0002371!1.69e-10!80;UBERON:0003080!4.09e-10!42;UBERON:0002791!5.51e-10!33;UBERON:0002308!6.12e-10!9;UBERON:0000125!6.12e-10!9;UBERON:0001893!1.28e-09!34;UBERON:0001474!2.09e-09!86;UBERON:0002346!3.49e-09!90;UBERON:0002390!5.45e-09!102;UBERON:0003061!5.45e-09!102;UBERON:0002780!7.68e-09!41;UBERON:0001890!7.68e-09!41;UBERON:0006240!7.68e-09!41;UBERON:0003075!8.12e-09!86;UBERON:0007284!8.12e-09!86;UBERON:0000955!2.06e-08!69;UBERON:0006238!2.06e-08!69;UBERON:0006331!2.32e-08!3;UBERON:0002405!2.95e-08!115;UBERON:0002193!1.07e-07!112;UBERON:0005743!1.14e-07!86;UBERON:0001017!2.34e-07!82;UBERON:0000062!2.76e-07!511;UBERON:0001869!2.84e-07!32;UBERON:0004765!2.85e-07!101;UBERON:0001434!2.85e-07!101;UBERON:0002420!3.77e-07!9;UBERON:0007245!3.77e-07!9;UBERON:0010009!3.77e-07!9;UBERON:0010011!3.77e-07!9;UBERON:0000454!3.77e-07!9;UBERON:0003056!6.02e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;1.88e-21;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,1.53e-21,1;UBERON:0002371,3.42e-09,76;UBERON:0001474,1.61e-08,82;UBERON:0004765,9.34e-08,90;UBERON:0002405,1.67e-07,93;UBERON:0002390,4.08e-07,98;UBERON:0003061,4.08e-07,98;UBERON:0001434,5.70e-07,100 | |||
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| ||
|short_description=p@chr6:108581708..108581720,+ | |short_description=p@chr6:108581708..108581720,+ | ||
}} | }} |
Latest revision as of 18:05, 30 July 2015
Short description: | p@chr6:108581708..108581720, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:108581708..108581720, + |
Coexpression cluster: | C3798_vagina_Mast_liver_breast_CD14_thymus_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.55e-36 | 5 |
basophil mast progenitor cell | 2.55e-36 | 5 |
endocrine cell | 1.52e-20 | 9 |
myeloid lineage restricted progenitor cell | 1.40e-10 | 66 |
granulocyte monocyte progenitor cell | 2.00e-10 | 67 |
myeloid leukocyte | 1.06e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
vagina | 1.53e-21 | 1 |
bone marrow | 3.42e-09 | 76 |
bone element | 1.61e-08 | 82 |
skeletal element | 9.34e-08 | 90 |
immune system | 1.67e-07 | 93 |
hematopoietic system | 4.08e-07 | 98 |
blood island | 4.08e-07 | 98 |
skeletal system | 5.70e-07 | 100 |