FFCP PHASE1:Hg19::chr10:135340859..135340874,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1571 | |EntrezGene=1571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2631 | |HGNC=2631 | ||
|TSSclassifier=strong | |||
|UniProt=P05181,Q59EW1,Q4LBD0 | |UniProt=P05181,Q59EW1,Q4LBD0 | ||
|association_with_transcript=0bp_to_ENST00000252945,NM_000773,uc001lnj.1,uc001lnk.1,uc009ybl.1,uc009ybm.1_5end | |association_with_transcript=0bp_to_ENST00000252945,NM_000773,uc001lnj.1,uc001lnk.1,uc009ybl.1,uc009ybm.1_5end | ||
|cluster_id=chr10:135340859..135340874,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_CYP2E1_5end | |description=CAGE_peak_1_at_CYP2E1_5end | ||
|id=chr10:135340859..135340874,+ | |id=chr10:135340859..135340874,+ | ||
|ontology_enrichment_celltype=CL:0000182;8.33e-07;12 | |ontology_enrichment_celltype=CL:0000239!8.07e-07!3;CL:1000615!8.07e-07!3;CL:0002306!8.07e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;8.33e-07;12 | ||
|ontology_enrichment_disease=DOID:114;5.97e-17;2!DOID:178;2.55e-09;1!DOID:326;2.55e-09;1!DOID:3978;2.55e-09;1!DOID:3394;2.55e-09;1!DOID:5844;2.55e-09;1!DOID:1287;6.22e-09;4 | |ontology_enrichment_celltype_v019_2=CL:0000182,8.33e-07,12 | ||
|ontology_enrichment_uberon=UBERON:0006947;9.83e-12;3!UBERON:0004054;9.83e-12;3!UBERON:0002423;1.68e-11;25!UBERON:0002107;7.75e-11;19!UBERON:0006925;7.75e-11;19!UBERON:0000998;1.84e-09;1!UBERON:0006868;1.84e-09;1!UBERON:0002372;1.99e-09;1!UBERON:0001961;1.99e-09;1!UBERON:0001744;1.99e-09;1!UBERON:0001042;1.99e-09;1!UBERON:0001735;1.99e-09;1!UBERON:0001000;2.16e-09;1!UBERON:0005352;2.16e-09;1!UBERON:0002146;2.77e-09;1!UBERON:0005623;2.77e-09;1!UBERON:0005904;5.09e-09;4!UBERON:0003135;4.47e-07;11 | |ontology_enrichment_development_v019=UBERON:0006242;1.56e-09;1!UBERON:0005754;1.84e-09;1!UBERON:0009143;3.00e-09;1!UBERON:0006222;3.67e-09;1!UBERON:0004161;2.65e-07;11 | ||
|ontology_enrichment_disease=DOID:114!2.12e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;5.97e-17;2!DOID:178;2.55e-09;1!DOID:326;2.55e-09;1!DOID:3978;2.55e-09;1!DOID:3394;2.55e-09;1!DOID:5844;2.55e-09;1!DOID:1287;6.22e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.97e-17,2;DOID:178,2.55e-09,1;DOID:326,2.55e-09,1;DOID:3978,2.55e-09,1;DOID:3394,2.55e-09,1;DOID:5844,2.55e-09,1;DOID:1287,6.22e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.97e-24!115;UBERON:0006947!1.57e-14!3;UBERON:0004054!1.57e-14!3;UBERON:0003135!3.53e-14!11;UBERON:0005172!2.51e-11!55;UBERON:0005173!2.51e-11!55;UBERON:0005904!5.13e-11!4;UBERON:0002417!6.09e-10!61;UBERON:0000916!6.09e-10!61;UBERON:0003101!5.35e-09!22;UBERON:0000079!5.35e-09!22;UBERON:0005057!5.07e-08!26;UBERON:0002368!2.71e-07!35;UBERON:0006853!8.07e-07!3;UBERON:0007685!8.07e-07!3;UBERON:0004134!8.07e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;9.83e-12;3!UBERON:0004054;9.83e-12;3!UBERON:0002423;1.68e-11;25!UBERON:0002107;7.75e-11;19!UBERON:0006925;7.75e-11;19!UBERON:0000998;1.84e-09;1!UBERON:0006868;1.84e-09;1!UBERON:0002372;1.99e-09;1!UBERON:0001961;1.99e-09;1!UBERON:0001744;1.99e-09;1!UBERON:0001042;1.99e-09;1!UBERON:0001735;1.99e-09;1!UBERON:0001000;2.16e-09;1!UBERON:0005352;2.16e-09;1!UBERON:0002146;2.77e-09;1!UBERON:0005623;2.77e-09;1!UBERON:0005904;5.09e-09;4!UBERON:0003135;4.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.59e-13,114;UBERON:0006947,9.83e-12,3;UBERON:0004054,9.83e-12,3;UBERON:0009497,1.68e-11,25;UBERON:0000015,1.68e-11,25;UBERON:0002423,1.68e-11,25;UBERON:0006235,1.68e-11,25;UBERON:0004161,1.68e-11,25;UBERON:0002107,7.75e-11,19;UBERON:0006925,7.75e-11,19;UBERON:0008836,7.75e-11,19;UBERON:0000998,1.84e-09,1;UBERON:0006868,1.84e-09,1;UBERON:0002372,1.99e-09,1;UBERON:0001961,1.99e-09,1;UBERON:0001744,1.99e-09,1;UBERON:0001735,1.99e-09,1;UBERON:0001000,2.16e-09,1;UBERON:0005352,2.16e-09,1;UBERON:0008835,2.49e-09,22;UBERON:0003894,2.49e-09,22;UBERON:0002146,2.77e-09,1;UBERON:0005623,2.77e-09,1;UBERON:0005904,5.09e-09,4;UBERON:0009854,6.46e-09,23;UBERON:0005172,1.24e-08,54;UBERON:0005173,1.24e-08,54;UBERON:0007499,3.48e-08,25;UBERON:0009856,7.34e-08,26;UBERON:0002417,1.16e-07,60;UBERON:0000916,1.16e-07,60;UBERON:0003135,4.33e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1280832199858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5740.73552708072,9594.35928920698,7013.26698221495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0,6167.00454711618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6164.34778726195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,160.909235851806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,2.34264445725339,0,0,0,8.2862724598372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,3.39461557709468,0,1.58186518546373,0,0,0,0,0,18.3569575475843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35404805622199,0,5.59101201397175,6.86761677018513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,9484.12780247711,49.0275488975219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35966331177257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,13.1249985559188,0,0,0,0,0,2.8041122745922,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22469987149797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,2.94760543171796,0,0,1.91910583710883,0,0,0.496597714366863,0,0.891060215894309,0.202117188958219,1.30630048738177,0,9.6986956341006,0.502055437748735,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1280832199858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5740.73552708072,9594.35928920698,7013.26698221495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0,6167.00454711618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6164.34778726195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,160.909235851806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,2.34264445725339,0,0,0,8.2862724598372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,3.39461557709468,0,1.58186518546373,0,0,0,0,0,18.3569575475843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35404805622199,0,5.59101201397175,6.86761677018513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,9484.12780247711,49.0275488975219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35966331177257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,13.1249985559188,0,0,0,0,0,2.8041122745922,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22469987149797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,2.94760543171796,0,0,1.91910583710883,0,0,0.496597714366863,0,0.891060215894309,0.202117188958219,1.30630048738177,0,9.6986956341006,0.502055437748735,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@CYP2E1 | |short_description=p1@CYP2E1 | ||
}} | }} |
Latest revision as of 05:58, 17 September 2015
Short description: | p1@CYP2E1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP2E1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000252945, NM_000773, uc001lnj.1, uc001lnk.1, uc009ybl.1, uc009ybm.1_5end |
EntrezGene: | CYP2E1 |
HGNC: | 2631 |
UniProt: | P05181Q59EW1Q4LBD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.33e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.59e-13 | 114 |
male genital duct | 9.83e-12 | 3 |
internal male genitalia | 9.83e-12 | 3 |
epithelium of foregut-midgut junction | 1.68e-11 | 25 |
anatomical boundary | 1.68e-11 | 25 |
hepatobiliary system | 1.68e-11 | 25 |
foregut-midgut junction | 1.68e-11 | 25 |
septum transversum | 1.68e-11 | 25 |
liver | 7.75e-11 | 19 |
digestive gland | 7.75e-11 | 19 |
liver bud | 7.75e-11 | 19 |
seminal vesicle | 1.84e-09 | 1 |
seminal fluid secreting gland | 1.84e-09 | 1 |
tonsil | 1.99e-09 | 1 |
mucosa-associated lymphoid tissue | 1.99e-09 | 1 |
lymphoid tissue | 1.99e-09 | 1 |
tonsillar ring | 1.99e-09 | 1 |
vas deferens | 2.16e-09 | 1 |
spermatic cord | 2.16e-09 | 1 |
hepatic diverticulum | 2.49e-09 | 22 |
liver primordium | 2.49e-09 | 22 |
pulmonary valve | 2.77e-09 | 1 |
semi-lunar valve | 2.77e-09 | 1 |
duct of male reproductive system | 5.09e-09 | 4 |
digestive tract diverticulum | 6.46e-09 | 23 |
abdomen element | 1.24e-08 | 54 |
abdominal segment element | 1.24e-08 | 54 |
epithelial sac | 3.48e-08 | 25 |
sac | 7.34e-08 | 26 |
abdominal segment of trunk | 1.16e-07 | 60 |
abdomen | 1.16e-07 | 60 |
male reproductive organ | 4.33e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.97e-17 | 2 |
vascular disease | 2.55e-09 | 1 |
ischemia | 2.55e-09 | 1 |
extrinsic cardiomyopathy | 2.55e-09 | 1 |
myocardial ischemia | 2.55e-09 | 1 |
myocardial infarction | 2.55e-09 | 1 |
cardiovascular system disease | 6.22e-09 | 4 |