FFCP PHASE1:Hg19::chr2:188415716..188415740,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:188415716..188415740,- | |||
|coexpression_cluster_id=C4160 | |coexpression_cluster_id=C4160 | ||
|description=CAGE_peak_at_chr2:188415716..188415740,- | |description=CAGE_peak_at_chr2:188415716..188415740,- | ||
|id=chr2:188415716..188415740,- | |id=chr2:188415716..188415740,- | ||
|ontology_enrichment_celltype=CL:0002195;2.33e-13;2!CL:0002571;2.33e-13;2!CL:0002144;8.23e-09;3!CL:0000222;3.20e-07;1 | |ontology_enrichment_celltype=CL:0002139!5.40e-12!24;CL:0000115!7.58e-09!35;CL:0000222!9.86e-09!119;CL:0000071!3.17e-08!18;CL:0002546!3.17e-08!18 | ||
| | |ontology_enrichment_celltype_v019=CL:0002195;2.33e-13;2!CL:0002571;2.33e-13;2!CL:0002144;8.23e-09;3!CL:0000222;3.20e-07;1 | ||
|ontology_enrichment_disease=DOID:3371;7.74e-08;1!DOID:4549;7.74e-08;1!DOID:5861;7.74e-08;1!DOID:6496;7.74e-08;1!DOID:5662;1.61e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0002195,2.64e-13,2;CL:0002571,2.64e-13,2;CL:0002144,8.57e-09,3 | ||
|ontology_enrichment_uberon=UBERON:0010523;8.23e-09;3!UBERON:0001915;8.23e-09;3!UBERON:0001982;8.23e-09;3!UBERON:0002171;1.61e-07;1!UBERON:0006518;1.61e-07;1!UBERON:0008949;1.61e-07;1!UBERON:0000101;1.61e-07;1!UBERON:0002167;1.61e-07;1!UBERON:0001473;2.49e-07;8!UBERON:0004536;2.49e-07;8!UBERON:0006558;2.49e-07;8 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.74e-08;1!DOID:4549;7.74e-08;1!DOID:5861;7.74e-08;1!DOID:6496;7.74e-08;1!DOID:5662;1.61e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.03e-08,1;DOID:4549,7.03e-08,1;DOID:5861,7.03e-08,1;DOID:6496,7.03e-08,1;DOID:5662,1.72e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000477!1.61e-12!286;UBERON:0004921!3.56e-12!129;UBERON:0004185!3.56e-12!129;UBERON:0000490!1.16e-11!138;UBERON:0003914!3.05e-11!118;UBERON:0000119!4.22e-11!312;UBERON:0000483!5.06e-11!309;UBERON:0004111!5.97e-11!241;UBERON:0003104!1.84e-10!238;UBERON:0009142!1.84e-10!238;UBERON:0001007!6.09e-10!155;UBERON:0001555!6.09e-10!155;UBERON:0007026!6.09e-10!155;UBERON:0001009!8.07e-10!113;UBERON:0000926!1.85e-09!448;UBERON:0004120!1.85e-09!448;UBERON:0006603!1.85e-09!448;UBERON:0002100!2.07e-09!216;UBERON:0000481!2.12e-09!347;UBERON:0000055!2.62e-09!69;UBERON:0004535!4.15e-09!110;UBERON:0004119!4.21e-09!169;UBERON:0000925!4.21e-09!169;UBERON:0006595!4.21e-09!169;UBERON:0000025!5.98e-09!194;UBERON:0000468!6.58e-09!659;UBERON:0002049!1.92e-08!79;UBERON:0007798!1.92e-08!79;UBERON:0004872!2.53e-08!84;UBERON:0001986!3.17e-08!18;UBERON:0004638!3.17e-08!18;UBERON:0004852!3.17e-08!18;UBERON:0000077!4.06e-08!130;UBERON:0000467!4.71e-08!625;UBERON:0000480!5.55e-08!626;UBERON:0001041!1.78e-07!98;UBERON:0000487!2.95e-07!22;UBERON:0001048!4.17e-07!168;UBERON:0000922!4.37e-07!612;UBERON:0002108!4.41e-07!14;UBERON:0005911!4.60e-07!82;UBERON:0000160!4.79e-07!27;UBERON:0000923!7.61e-07!604;UBERON:0005291!7.61e-07!604;UBERON:0006598!7.61e-07!604;UBERON:0002532!7.61e-07!604;UBERON:0002050!8.86e-07!605;UBERON:0005423!8.86e-07!605;UBERON:0005177!9.24e-07!107;UBERON:0005157!9.83e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;8.23e-09;3!UBERON:0001915;8.23e-09;3!UBERON:0001982;8.23e-09;3!UBERON:0002171;1.61e-07;1!UBERON:0006518;1.61e-07;1!UBERON:0008949;1.61e-07;1!UBERON:0000101;1.61e-07;1!UBERON:0002167;1.61e-07;1!UBERON:0001473;2.49e-07;8!UBERON:0004536;2.49e-07;8!UBERON:0006558;2.49e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,8.57e-09,3;UBERON:0001915,8.57e-09,3;UBERON:0001982,8.57e-09,3;UBERON:0002171,1.33e-07,1;UBERON:0006518,1.33e-07,1;UBERON:0008949,1.33e-07,1;UBERON:0000101,1.33e-07,1;UBERON:0002167,1.33e-07,1;UBERON:0001473,2.30e-07,8;UBERON:0004536,2.30e-07,8;UBERON:0006558,2.30e-07,8 | |||
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|short_description=p@chr2:188415716..188415740,- | |short_description=p@chr2:188415716..188415740,- | ||
}} | }} |
Latest revision as of 04:12, 29 July 2015
Short description: | p@chr2:188415716..188415740, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:188415716..188415740, - |
Coexpression cluster: | C4160_giant_embryonic_large_extraskeletal_pleomorphic_glioblastoma_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.64e-13 | 2 |
hepatic mesenchymal stem cell | 2.64e-13 | 2 |
capillary endothelial cell | 8.57e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 8.57e-09 | 3 |
endothelium of capillary | 8.57e-09 | 3 |
capillary | 8.57e-09 | 3 |
lower lobe of right lung | 1.33e-07 | 1 |
right lung lobe | 1.33e-07 | 1 |
lower lobe of lung | 1.33e-07 | 1 |
lobe of lung | 1.33e-07 | 1 |
right lung | 1.33e-07 | 1 |
lymphatic vessel | 2.30e-07 | 8 |
lymph vasculature | 2.30e-07 | 8 |
lymphatic part of lymphoid system | 2.30e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.03e-08 | 1 |
extraosseous chondrosarcoma | 7.03e-08 | 1 |
myxoid chondrosarcoma | 7.03e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 7.03e-08 | 1 |
pleomorphic carcinoma | 1.72e-07 | 1 |