FFCP PHASE1:Hg19::chr5:149877414..149877426,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3340 | |EntrezGene=3340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7680 | |HGNC=7680 | ||
|TSSclassifier=strong | |||
|UniProt=E5RG24 | |UniProt=E5RG24 | ||
|association_with_transcript=-62bp_to_ENST00000518299_5end | |association_with_transcript=-62bp_to_ENST00000518299_5end | ||
|cluster_id=chr5:149877414..149877426,+ | |||
|description=CAGE_peak_13_at_NDST1_5end | |description=CAGE_peak_13_at_NDST1_5end | ||
|id=chr5:149877414..149877426,+ | |id=chr5:149877414..149877426,+ | ||
|ontology_enrichment_celltype=CL:0002368;2.29e-23;13!CL:0000244;1.53e-21;4!CL:0000731;1.53e-21;4!CL:0002202;1.97e-19;9!CL:0002632;1.97e-19;9!CL:0002076;3.66e-16;42!CL:0000307;8.94e-16;3!CL:0002621;4.57e-15;3!CL:0000575;1.28e-10;2!CL:0002159;1.02e-08;14!CL:0002328;1.36e-07;3 | |ontology_enrichment_celltype=CL:0002076!4.71e-12!43;CL:0002368!6.39e-11!13;CL:0000220!4.03e-10!246;CL:0002321!7.26e-10!248;CL:0000192!1.92e-08!42;CL:0000514!1.92e-08!42;CL:0000359!8.42e-08!32;CL:0002202!3.24e-07!9;CL:0002632!3.24e-07!9;CL:0000183!9.86e-07!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0002368;2.29e-23;13!CL:0000244;1.53e-21;4!CL:0000731;1.53e-21;4!CL:0002202;1.97e-19;9!CL:0002632;1.97e-19;9!CL:0002076;3.66e-16;42!CL:0000307;8.94e-16;3!CL:0002621;4.57e-15;3!CL:0000575;1.28e-10;2!CL:0002159;1.02e-08;14!CL:0002328;1.36e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.23e-23,13;CL:0000244,1.55e-21,4;CL:0000731,1.55e-21,4;CL:0002076,3.82e-20,42;CL:0002202,9.21e-20,9;CL:0002632,9.21e-20,9;CL:0000068,6.34e-16,3;CL:0000069,6.34e-16,3;CL:0000307,6.34e-16,3;CL:0000377,6.34e-16,3;CL:0002621,6.79e-15,3;CL:0000223,9.47e-14,58;CL:0000575,5.81e-11,2;CL:0002321,4.20e-10,250;CL:0000066,2.43e-09,253;CL:0002159,6.36e-09,14;CL:0002328,8.74e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;8.94e-16;3!CL:0000223;3.67e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000486;6.27e-20;12!UBERON:0000365;2.93e-17;5!UBERON:0001949;4.57e-15;3!UBERON:0005910;2.12e-14;6!UBERON:0007196;1.99e-11;15!UBERON:0001558;1.99e-11;15!UBERON:0005911;2.33e-11;36!UBERON:0004815;1.36e-07;3!UBERON:0002031;1.36e-07;3!UBERON:0004807;2.02e-07;22!UBERON:0003126;5.14e-07;7!UBERON:0001005;5.14e-07;7 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.31e-15!42;UBERON:0003509!8.31e-15!42;UBERON:0004572!8.31e-15!42;UBERON:0000475!2.06e-11!365;UBERON:0004872!1.08e-10!84;UBERON:0004573!1.25e-10!33;UBERON:0004571!1.25e-10!33;UBERON:0000483!2.64e-10!309;UBERON:0000119!5.82e-10!312;UBERON:0000467!7.54e-10!625;UBERON:0000480!9.20e-10!626;UBERON:0001981!2.18e-09!60;UBERON:0007500!2.18e-09!60;UBERON:0004537!2.18e-09!60;UBERON:0006965!2.18e-09!60;UBERON:0000033!2.24e-09!123;UBERON:0004111!3.28e-09!241;UBERON:0000486!6.33e-09!82;UBERON:0000153!2.50e-08!129;UBERON:0007811!2.50e-08!129;UBERON:0000025!3.77e-08!194;UBERON:0000468!8.46e-08!659;UBERON:0000923!1.79e-07!604;UBERON:0005291!1.79e-07!604;UBERON:0006598!1.79e-07!604;UBERON:0002532!1.79e-07!604;UBERON:0002050!2.13e-07!605;UBERON:0005423!2.13e-07!605;UBERON:0000477!3.04e-07!286;UBERON:0002049!3.31e-07!79;UBERON:0007798!3.31e-07!79;UBERON:0000914!3.50e-07!83;UBERON:0002329!3.50e-07!83;UBERON:0003077!3.50e-07!83;UBERON:0003059!3.50e-07!83;UBERON:0007282!3.50e-07!83;UBERON:0009618!3.50e-07!83;UBERON:0007285!3.50e-07!83;UBERON:0000055!4.64e-07!69;UBERON:0004121!5.10e-07!169;UBERON:0000064!6.65e-07!219;UBERON:0000922!7.08e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;6.27e-20;12!UBERON:0000365;2.93e-17;5!UBERON:0001949;4.57e-15;3!UBERON:0005910;2.12e-14;6!UBERON:0007196;1.99e-11;15!UBERON:0001558;1.99e-11;15!UBERON:0005911;2.33e-11;36!UBERON:0004815;1.36e-07;3!UBERON:0002031;1.36e-07;3!UBERON:0004807;2.02e-07;22!UBERON:0003126;5.14e-07;7!UBERON:0001005;5.14e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.95e-17,5;UBERON:0001949,6.79e-15,3;UBERON:0005910,2.14e-14,6;UBERON:0007196,1.28e-11,15;UBERON:0001558,1.28e-11,15;UBERON:0001004,1.84e-08,74;UBERON:0004119,6.35e-08,160;UBERON:0000925,6.35e-08,160;UBERON:0006595,6.35e-08,160;UBERON:0004815,8.74e-08,3;UBERON:0002031,8.74e-08,3;UBERON:0000915,9.71e-08,52;UBERON:0004807,1.28e-07,28;UBERON:0000486,2.65e-07,83;UBERON:0003126,4.46e-07,7;UBERON:0001005,4.46e-07,7 | |||
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| ||
|short_description=p13@NDST1 | |short_description=p13@NDST1 | ||
}} | }} |
Latest revision as of 05:09, 16 September 2015
Short description: | p13@NDST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NDST1_5end |
Coexpression cluster: | NA |
Association with transcript: | -62bp_to_ENST00000518299_5end |
EntrezGene: | NDST1 |
HGNC: | 7680 |
UniProt: | E5RG24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.23e-23 | 13 |
transitional epithelial cell | 1.55e-21 | 4 |
urothelial cell | 1.55e-21 | 4 |
endo-epithelial cell | 3.82e-20 | 42 |
epithelial cell of tracheobronchial tree | 9.21e-20 | 9 |
epithelial cell of lower respiratory tract | 9.21e-20 | 9 |
duct epithelial cell | 6.34e-16 | 3 |
branched duct epithelial cell | 6.34e-16 | 3 |
tracheal epithelial cell | 6.34e-16 | 3 |
tracheoblast | 6.34e-16 | 3 |
gingival epithelial cell | 6.79e-15 | 3 |
endodermal cell | 9.47e-14 | 58 |
corneal epithelial cell | 5.81e-11 | 2 |
embryonic cell | 4.20e-10 | 250 |
epithelial cell | 2.43e-09 | 253 |
general ecto-epithelial cell | 6.36e-09 | 14 |
bronchial epithelial cell | 8.74e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.95e-17 | 5 |
gingival epithelium | 6.79e-15 | 3 |
transitional epithelium | 2.14e-14 | 6 |
tracheobronchial tree | 1.28e-11 | 15 |
lower respiratory tract | 1.28e-11 | 15 |
respiratory system | 1.84e-08 | 74 |
endoderm-derived structure | 6.35e-08 | 160 |
endoderm | 6.35e-08 | 160 |
presumptive endoderm | 6.35e-08 | 160 |
lower respiratory tract epithelium | 8.74e-08 | 3 |
epithelium of bronchus | 8.74e-08 | 3 |
thoracic segment of trunk | 9.71e-08 | 52 |
respiratory system epithelium | 1.28e-07 | 28 |
multilaminar epithelium | 2.65e-07 | 83 |
trachea | 4.46e-07 | 7 |
respiratory airway | 4.46e-07 | 7 |