FFCP PHASE1:Hg19::chr16:47920709..47920716,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=324bp_to_uc002eex.1_5end | |association_with_transcript=324bp_to_uc002eex.1_5end | ||
|cluster_id=chr16:47920709..47920716,- | |||
|coexpression_cluster_id=C275 | |coexpression_cluster_id=C275 | ||
|description=CAGE_peak_4_at_uc002eex.1_5end | |description=CAGE_peak_4_at_uc002eex.1_5end | ||
|id=chr16:47920709..47920716,- | |id=chr16:47920709..47920716,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000988;2.39e-66;3!UBERON:0002298;4.27e-34;6!UBERON:0002680;2.62e-23;9!UBERON:0001895;2.62e-23;9!UBERON:0004733;6.76e-18;12!UBERON:0002028;6.76e-18;12!UBERON:0004732;1.21e-16;13 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!4.17e-30!3;UBERON:0005290!4.17e-30!3;UBERON:0010096!4.17e-30!3;UBERON:0002298!1.85e-25!8;UBERON:0003076!6.67e-24!15;UBERON:0003057!6.67e-24!15;UBERON:0002134!1.34e-23!1;UBERON:0005208!1.34e-23!1;UBERON:0005946!1.34e-23!1;UBERON:0005965!1.34e-23!1;UBERON:0002078!1.34e-23!1;UBERON:0002022!3.28e-23!1;UBERON:0004733!3.08e-17!12;UBERON:0002028!3.08e-17!12;UBERON:0007277!3.08e-17!12;UBERON:0004732!5.71e-16!13;UBERON:0001049!1.14e-13!57;UBERON:0005068!1.14e-13!57;UBERON:0006241!1.14e-13!57;UBERON:0007135!1.14e-13!57;UBERON:0001017!1.05e-12!82;UBERON:0002081!1.65e-12!2;UBERON:0002133!1.65e-12!2;UBERON:0003075!2.65e-12!86;UBERON:0007284!2.65e-12!86;UBERON:0005743!4.01e-12!86;UBERON:0002346!9.34e-12!90;UBERON:0000955!3.74e-11!69;UBERON:0006238!3.74e-11!69;UBERON:0000073!5.51e-11!94;UBERON:0001016!5.51e-11!94;UBERON:0002616!2.38e-09!59;UBERON:0007023!2.88e-09!115;UBERON:0000988!8.31e-09!3;UBERON:0003978!8.96e-09!3;UBERON:0009751!8.96e-09!3;UBERON:0004151!8.96e-09!3;UBERON:0000946!8.96e-09!3;UBERON:0002523!8.96e-09!3;UBERON:0005983!8.96e-09!3;UBERON:0004145!8.96e-09!3;UBERON:0002165!8.96e-09!3;UBERON:0002062!8.96e-09!3;UBERON:0007280!8.96e-09!3;UBERON:0002240!1.12e-08!3;UBERON:0004121!5.72e-08!169;UBERON:0000924!8.83e-08!173;UBERON:0006601!8.83e-08!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;2.39e-66;3!UBERON:0002298;4.27e-34;6!UBERON:0002680;2.62e-23;9!UBERON:0001895;2.62e-23;9!UBERON:0004733;6.76e-18;12!UBERON:0002028;6.76e-18;12!UBERON:0004732;1.21e-16;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,2.39e-66,3;UBERON:0002298,4.27e-34,6;UBERON:0002680,2.62e-23,9;UBERON:0001895,2.62e-23,9;UBERON:0010092,2.62e-23,9;UBERON:0004733,6.76e-18,12;UBERON:0002028,6.76e-18,12;UBERON:0007277,6.76e-18,12;UBERON:0004732,1.21e-16,13;UBERON:0003076,1.22e-14,15;UBERON:0003057,1.22e-14,15 | |||
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|short_description=p4@uc002eex.1 | |short_description=p4@uc002eex.1 | ||
}} | }} |
Latest revision as of 09:14, 25 July 2015
Short description: | p4@uc002eex.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_uc002eex.1_5end |
Coexpression cluster: | C275_pons_medulla_cerebellum_locus_thalamus_diencephalon_spinal |
Association with transcript: | 324bp_to_uc002eex.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 2.39e-66 | 3 |
brainstem | 4.27e-34 | 6 |
regional part of metencephalon | 2.62e-23 | 9 |
metencephalon | 2.62e-23 | 9 |
future metencephalon | 2.62e-23 | 9 |
segmental subdivision of hindbrain | 6.76e-18 | 12 |
hindbrain | 6.76e-18 | 12 |
presumptive hindbrain | 6.76e-18 | 12 |
segmental subdivision of nervous system | 1.21e-16 | 13 |
posterior neural tube | 1.22e-14 | 15 |
chordal neural plate | 1.22e-14 | 15 |