FFCP PHASE1:Hg19::chr11:70309490..70309499,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:70309490..70309499,+ | |||
|coexpression_cluster_id=C78 | |coexpression_cluster_id=C78 | ||
|description=CAGE_peak_at_chr11:70309490..70309499,+ | |description=CAGE_peak_at_chr11:70309490..70309499,+ | ||
|id=chr11:70309490..70309499,+ | |id=chr11:70309490..70309499,+ | ||
|ontology_enrichment_celltype=CL:0000322;8.70e-18;3!CL:0000945;2.40e-09;24!CL:0000039;2.35e-08;7!CL:0000586;2.35e-08;7!CL:0002202;8.14e-07;9!CL:0002632;8.14e-07;9 | |ontology_enrichment_celltype=CL:0000039!5.90e-20!7;CL:0000586!5.90e-20!7;CL:0002322!3.54e-16!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000322;8.70e-18;3!CL:0000945;2.40e-09;24!CL:0000039;2.35e-08;7!CL:0000586;2.35e-08;7!CL:0002202;8.14e-07;9!CL:0002632;8.14e-07;9 | ||
|ontology_enrichment_disease=DOID:2355;3.10e-50;1!DOID:74;6.30e-26;2!DOID:3910;6.30e-26;2!DOID:0060058;7.35e-21;10!DOID:1287;1.06e-13;4!DOID:3908;3.10e-11;5!DOID:1325;2.11e-08;7!DOID:3904;2.11e-08;7!DOID:3905;8.14e-07;9 | |ontology_enrichment_celltype_v019_2=CL:0000322,8.00e-18,3;CL:0000945,2.45e-09,24;CL:0000826,2.45e-09,24;CL:0000039,2.35e-08,7;CL:0000586,2.35e-08,7;CL:0002202,7.91e-07,9;CL:0002632,7.91e-07,9 | ||
|ontology_enrichment_uberon=UBERON:0004903;6.30e-26;2!UBERON:0002173;6.30e-26;2!UBERON:0002186;6.30e-26;2!UBERON:0004821;8.70e-18;3!UBERON:0007499;8.70e-18;3!UBERON:0003215;8.70e-18;3!UBERON:0010368;8.70e-18;3!UBERON:0009911;8.70e-18;3!UBERON:0002299;8.70e-18;3!UBERON:0006524;8.70e-18;3!UBERON:0008874;8.70e-18;3!UBERON:0002169;8.70e-18;3!UBERON:0004894;8.70e-18;3!UBERON:0009856;1.06e-13;4!UBERON:0000473;1.80e-07;8 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2355!1.98e-10!1;DOID:0060085!4.06e-10!1;DOID:3165!4.06e-10!1;DOID:0060121!4.06e-10!1;DOID:2438!4.06e-10!1;DOID:4418!4.06e-10!1;DOID:3095!1.20e-09!22;DOID:2994!1.20e-09!22;DOID:3908!6.31e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:2355;3.10e-50;1!DOID:74;6.30e-26;2!DOID:3910;6.30e-26;2!DOID:0060058;7.35e-21;10!DOID:1287;1.06e-13;4!DOID:3908;3.10e-11;5!DOID:1325;2.11e-08;7!DOID:3904;2.11e-08;7!DOID:3905;8.14e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.99e-50,1;DOID:3910,5.56e-26,2;DOID:74,7.14e-26,2;DOID:0060058,7.73e-21,10;DOID:1287,1.13e-13,4;DOID:3908,2.94e-11,5;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.43e-27!8;UBERON:0003135!7.10e-20!11;UBERON:0000991!2.36e-10!21;UBERON:0009196!2.36e-10!21;UBERON:0009117!2.36e-10!21;UBERON:0005564!2.36e-10!21;UBERON:0004176!7.09e-10!22;UBERON:0003101!7.09e-10!22;UBERON:0000079!7.09e-10!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.30e-26;2!UBERON:0002173;6.30e-26;2!UBERON:0002186;6.30e-26;2!UBERON:0004821;8.70e-18;3!UBERON:0007499;8.70e-18;3!UBERON:0003215;8.70e-18;3!UBERON:0010368;8.70e-18;3!UBERON:0009911;8.70e-18;3!UBERON:0002299;8.70e-18;3!UBERON:0006524;8.70e-18;3!UBERON:0008874;8.70e-18;3!UBERON:0002169;8.70e-18;3!UBERON:0004894;8.70e-18;3!UBERON:0009856;1.06e-13;4!UBERON:0000473;1.80e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.56e-26,2;UBERON:0002173,5.56e-26,2;UBERON:0002186,5.56e-26,2;UBERON:0004821,8.00e-18,3;UBERON:0003215,8.00e-18,3;UBERON:0010368,8.00e-18,3;UBERON:0009911,8.00e-18,3;UBERON:0002299,8.00e-18,3;UBERON:0006524,8.00e-18,3;UBERON:0008874,8.00e-18,3;UBERON:0002169,8.00e-18,3;UBERON:0004894,8.00e-18,3;UBERON:0000473,1.80e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54019996197353,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,3.65377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,1.0028301571695,0.303114792872958,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54019996197353,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,3.65377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,1.0028301571695,0.303114792872958,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr11:70309490..70309499,+ | |short_description=p@chr11:70309490..70309499,+ | ||
}} | }} |
Latest revision as of 02:04, 24 July 2015
Short description: | p@chr11:70309490..70309499, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:70309490..70309499, + |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.00e-18 | 3 |
lymphocyte of B lineage | 2.45e-09 | 24 |
pro-B cell | 2.45e-09 | 24 |
germ line cell | 2.35e-08 | 7 |
germ cell | 2.35e-08 | 7 |
epithelial cell of tracheobronchial tree | 7.91e-07 | 9 |
epithelial cell of lower respiratory tract | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.56e-26 | 2 |
alveolar duct | 5.56e-26 | 2 |
bronchiole | 5.56e-26 | 2 |
pulmonary alveolus epithelium | 8.00e-18 | 3 |
alveolus | 8.00e-18 | 3 |
pulmonary lobule | 8.00e-18 | 3 |
lobule | 8.00e-18 | 3 |
alveolus of lung | 8.00e-18 | 3 |
alveolar system | 8.00e-18 | 3 |
pulmonary acinus | 8.00e-18 | 3 |
alveolar sac | 8.00e-18 | 3 |
alveolar wall | 8.00e-18 | 3 |
testis | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.99e-50 | 1 |
lung adenocarcinoma | 5.56e-26 | 2 |
hematopoietic system disease | 7.14e-26 | 2 |
lymphoma | 7.73e-21 | 10 |
cardiovascular system disease | 1.13e-13 | 4 |
non-small cell lung carcinoma | 2.94e-11 | 5 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |