FFCP PHASE1:Hg19::chr9:33264846..33264860,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51510 | |EntrezGene=51510 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26942 | |HGNC=26942 | ||
|TSSclassifier=strong | |||
|UniProt=B4DIR6,Q9NZZ3 | |UniProt=B4DIR6,Q9NZZ3 | ||
|association_with_transcript=-16bp_to_NM_001195536,NM_016410,uc003zsm.3,uc011lnv.1_5end | |association_with_transcript=-16bp_to_NM_001195536,NM_016410,uc003zsm.3,uc011lnv.1_5end | ||
|cluster_id=chr9:33264846..33264860,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_9_at_CHMP5_5end | |description=CAGE_peak_9_at_CHMP5_5end | ||
|id=chr9:33264846..33264860,+ | |id=chr9:33264846..33264860,+ | ||
|ontology_enrichment_celltype=CL:0000764;5.69e-21;2!CL:0000558;5.69e-21;2!CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000764;5.69e-21;2!CL:0000558;5.69e-21;2!CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,6.96e-21,2;CL:0000765,6.96e-21,2;CL:0000050,6.96e-21,2;CL:0000038,6.96e-21,2;CL:0000558,6.96e-21,2;CL:0000547,6.96e-21,2;CL:0000549,6.96e-21,2;CL:0000550,6.96e-21,2;CL:0000552,6.96e-21,2;CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.76e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0010077,3.42e-11,4;UBERON:0005389,3.42e-11,4;UBERON:0000484,3.42e-11,4;UBERON:0002546,3.42e-11,4;UBERON:0000965,3.42e-11,4;UBERON:0001803,3.42e-11,4;UBERON:0003073,3.42e-11,4;UBERON:0005426,3.42e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,1.83370705696798,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.168584690078102,0,0.55146986366197,0.435758888184812,0,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,1.3071772551245,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0,0,0,0,0.445234820091624,0.16480387422676,0,0,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0.21787692703798,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.129282956361551,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0.345701962667338,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,4.01627100556669,8.03892390468535,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,1.83370705696798,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.168584690078102,0,0.55146986366197,0.435758888184812,0,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,1.3071772551245,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.47748896947538,0,0,0,0,0.445234820091624,0.16480387422676,0,0,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0.21787692703798,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.129282956361551,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0.345701962667338,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,4.01627100556669,8.03892390468535,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p9@CHMP5 | |short_description=p9@CHMP5 | ||
}} | }} |
Latest revision as of 03:38, 17 September 2015
Short description: | p9@CHMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CHMP5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -16bp_to_NM_001195536, NM_016410, uc003zsm.3, uc011lnv.1_5end |
EntrezGene: | CHMP5 |
HGNC: | 26942 |
UniProt: | B4DIR6Q9NZZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 6.96e-21 | 2 |
erythroblast | 6.96e-21 | 2 |
megakaryocyte-erythroid progenitor cell | 6.96e-21 | 2 |
erythroid progenitor cell | 6.96e-21 | 2 |
reticulocyte | 6.96e-21 | 2 |
proerythroblast | 6.96e-21 | 2 |
basophilic erythroblast | 6.96e-21 | 2 |
polychromatophilic erythroblast | 6.96e-21 | 2 |
orthochromatic erythroblast | 6.96e-21 | 2 |
crystallin accumulating cell | 3.42e-11 | 4 |
vertebrate lens cell | 3.42e-11 | 4 |
lens epithelial cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
cuboidal epithelium | 3.42e-11 | 4 |
transparent eye structure | 3.42e-11 | 4 |
simple cuboidal epithelium | 3.42e-11 | 4 |
cranial placode | 3.42e-11 | 4 |
lens of camera-type eye | 3.42e-11 | 4 |
epithelium of lens | 3.42e-11 | 4 |
lens placode | 3.42e-11 | 4 |
lens vesicle | 3.42e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |